FFCP PHASE1:Hg19::chr3:35730760..35730766,+: Difference between revisions
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|id=chr3:35730760..35730766,+
|short_description=p78@ARPP21
|description=CAGE_peak_78_at_ARPP21_5end
|association_with_transcript=-39bp_to_ENST00000446068_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10777 | |EntrezGene=10777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16968 | |HGNC=16968 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_ENST00000446068_5end | |||
|cluster_id=chr3:35730760..35730766,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_78_at_ARPP21_5end | |||
|id=chr3:35730760..35730766,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.55e-98;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!7.73e-89!4;UBERON:0002435!7.73e-89!4;UBERON:0000204!7.73e-89!4;UBERON:0010082!7.73e-89!4;UBERON:0005383!1.68e-53!3;UBERON:0005382!1.68e-53!3;UBERON:0009663!2.73e-51!7;UBERON:0001874!1.48e-40!1;UBERON:0001882!2.21e-40!1;UBERON:0005403!2.21e-40!1;UBERON:0002308!3.80e-40!9;UBERON:0002420!3.80e-40!9;UBERON:0000125!3.80e-40!9;UBERON:0007245!3.80e-40!9;UBERON:0010009!3.80e-40!9;UBERON:0010011!3.80e-40!9;UBERON:0000454!3.80e-40!9;UBERON:0001873!3.11e-21!2;UBERON:0010122!3.11e-21!2;UBERON:0001897!6.96e-21!2;UBERON:0002780!9.75e-16!41;UBERON:0001890!9.75e-16!41;UBERON:0006240!9.75e-16!41;UBERON:0003080!2.18e-15!42;UBERON:0001869!1.24e-11!32;UBERON:0001049!1.35e-11!57;UBERON:0005068!1.35e-11!57;UBERON:0006241!1.35e-11!57;UBERON:0007135!1.35e-11!57;UBERON:0002791!2.57e-11!33;UBERON:0002616!3.12e-11!59;UBERON:0002020!5.12e-11!34;UBERON:0003528!5.12e-11!34;UBERON:0001893!5.12e-11!34;UBERON:0003056!6.84e-11!61;UBERON:0000955!1.36e-09!69;UBERON:0006238!1.36e-09!69;UBERON:0000349!3.22e-09!5;UBERON:0001017!3.33e-08!82;UBERON:0003075!6.09e-08!86;UBERON:0007284!6.09e-08!86;UBERON:0005743!7.38e-08!86;UBERON:0002346!1.28e-07!90;UBERON:0000073!3.50e-07!94;UBERON:0001016!3.50e-07!94;UBERON:0001894!6.39e-07!7;UBERON:0006222!6.39e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;1.55e-98;2!UBERON:0005383;2.39e-66;3!UBERON:0005382;2.39e-66;3!UBERON:0000369;3.10e-50;4!UBERON:0002435;3.10e-50;4!UBERON:0000204;3.10e-50;4!UBERON:0009663;1.78e-29;7!UBERON:0002420;2.62e-23;9!UBERON:0000125;2.62e-23;9!UBERON:0007245;2.62e-23;9!UBERON:0002308;2.62e-23;9!UBERON:0010009;2.62e-23;9!UBERON:0010011;2.62e-23;9!UBERON:0000454;2.62e-23;9!UBERON:0002780;4.53e-08;41!UBERON:0001890;4.53e-08;41!UBERON:0002791;2.32e-07;32!UBERON:0001869;2.32e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.55e-98,2;UBERON:0010122,1.55e-98,2;UBERON:0005383,2.39e-66,3;UBERON:0005382,2.39e-66,3;UBERON:0000369,3.10e-50,4;UBERON:0002435,3.10e-50,4;UBERON:0000204,3.10e-50,4;UBERON:0010082,3.10e-50,4;UBERON:0009663,1.78e-29,7;UBERON:0002420,2.62e-23,9;UBERON:0000125,2.62e-23,9;UBERON:0007245,2.62e-23,9;UBERON:0002308,2.62e-23,9;UBERON:0010009,2.62e-23,9;UBERON:0010011,2.62e-23,9;UBERON:0000454,2.62e-23,9;UBERON:0002791,1.82e-07,32;UBERON:0001869,1.82e-07,32;UBERON:0003528,4.03e-07,34;UBERON:0002020,4.03e-07,34;UBERON:0001893,4.03e-07,34 | |||
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|short_description=p78@ARPP21 | |||
}} | }} |
Latest revision as of 01:32, 18 September 2015
Short description: | p78@ARPP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_78_at_ARPP21_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -39bp_to_ENST00000446068_5end |
EntrezGene: | ARPP21 |
HGNC: | 16968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 1.55e-98 | 2 |
future caudate nucleus | 1.55e-98 | 2 |
caudate-putamen | 2.39e-66 | 3 |
dorsal striatum | 2.39e-66 | 3 |
corpus striatum | 3.10e-50 | 4 |
striatum | 3.10e-50 | 4 |
ventral part of telencephalon | 3.10e-50 | 4 |
future corpus striatum | 3.10e-50 | 4 |
telencephalic nucleus | 1.78e-29 | 7 |
basal ganglion | 2.62e-23 | 9 |
neural nucleus | 2.62e-23 | 9 |
nuclear complex of neuraxis | 2.62e-23 | 9 |
nucleus of brain | 2.62e-23 | 9 |
aggregate regional part of brain | 2.62e-23 | 9 |
collection of basal ganglia | 2.62e-23 | 9 |
cerebral subcortex | 2.62e-23 | 9 |
regional part of telencephalon | 1.82e-07 | 32 |
cerebral hemisphere | 1.82e-07 | 32 |
brain grey matter | 4.03e-07 | 34 |
gray matter | 4.03e-07 | 34 |
telencephalon | 4.03e-07 | 34 |