FFCP PHASE1:Hg19::chr4:62066409..62066507,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23284 | |EntrezGene=23284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20974 | |HGNC=20974 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-466bp_to_uc003hcq.3,uc010ihg.1_5end | |association_with_transcript=-466bp_to_uc003hcq.3,uc010ihg.1_5end | ||
|cluster_id=chr4:62066409..62066507,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_1_at_LPHN3_5end | |description=CAGE_peak_1_at_LPHN3_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.84e-14;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.84e-14;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.65e-50!94;UBERON:0001016!6.65e-50!94;UBERON:0005743!4.47e-49!86;UBERON:0001017!8.17e-48!82;UBERON:0007023!2.31e-46!115;UBERON:0001049!1.45e-42!57;UBERON:0005068!1.45e-42!57;UBERON:0006241!1.45e-42!57;UBERON:0007135!1.45e-42!57;UBERON:0000955!1.37e-41!69;UBERON:0006238!1.37e-41!69;UBERON:0002616!1.58e-41!59;UBERON:0003075!1.73e-38!86;UBERON:0007284!1.73e-38!86;UBERON:0002346!1.04e-37!90;UBERON:0004121!1.44e-33!169;UBERON:0000924!1.73e-33!173;UBERON:0006601!1.73e-33!173;UBERON:0002780!1.59e-32!41;UBERON:0001890!1.59e-32!41;UBERON:0006240!1.59e-32!41;UBERON:0003080!2.64e-31!42;UBERON:0001893!2.78e-30!34;UBERON:0002020!2.96e-30!34;UBERON:0003528!2.96e-30!34;UBERON:0000153!6.05e-30!129;UBERON:0007811!6.05e-30!129;UBERON:0000033!1.93e-29!123;UBERON:0002791!2.37e-29!33;UBERON:0001869!8.99e-29!32;UBERON:0003056!4.79e-27!61;UBERON:0000956!1.99e-22!25;UBERON:0000203!1.99e-22!25;UBERON:0002619!7.52e-22!22;UBERON:0001950!4.06e-20!20;UBERON:0000064!2.92e-14!219;UBERON:0003076!4.14e-12!15;UBERON:0003057!4.14e-12!15;UBERON:0000062!2.15e-11!511;UBERON:0000481!3.34e-11!347;UBERON:0000025!3.59e-11!194;UBERON:0000922!8.16e-11!612;UBERON:0004732!1.64e-10!13;UBERON:0000468!1.70e-10!659;UBERON:0000477!1.94e-10!286;UBERON:0000483!3.36e-10!309;UBERON:0000119!4.18e-10!312;UBERON:0004733!9.94e-10!12;UBERON:0002028!9.94e-10!12;UBERON:0007277!9.94e-10!12;UBERON:0000467!1.06e-09!625;UBERON:0002050!1.15e-09!605;UBERON:0005423!1.15e-09!605;UBERON:0000480!1.39e-09!626;UBERON:0002420!1.66e-09!9;UBERON:0007245!1.66e-09!9;UBERON:0010009!1.66e-09!9;UBERON:0010011!1.66e-09!9;UBERON:0000454!1.66e-09!9;UBERON:0000923!2.28e-09!604;UBERON:0005291!2.28e-09!604;UBERON:0006598!2.28e-09!604;UBERON:0002532!2.28e-09!604;UBERON:0004111!2.30e-09!241;UBERON:0002308!3.17e-09!9;UBERON:0000125!3.17e-09!9;UBERON:0000475!1.19e-08!365;UBERON:0001871!1.32e-08!7;UBERON:0009663!1.24e-07!7;UBERON:0002680!1.98e-07!9;UBERON:0001895!1.98e-07!9;UBERON:0010092!1.98e-07!9;UBERON:0000200!6.24e-07!6 | |ontology_enrichment_uberon=UBERON:0000073!6.65e-50!94;UBERON:0001016!6.65e-50!94;UBERON:0005743!4.47e-49!86;UBERON:0001017!8.17e-48!82;UBERON:0007023!2.31e-46!115;UBERON:0001049!1.45e-42!57;UBERON:0005068!1.45e-42!57;UBERON:0006241!1.45e-42!57;UBERON:0007135!1.45e-42!57;UBERON:0000955!1.37e-41!69;UBERON:0006238!1.37e-41!69;UBERON:0002616!1.58e-41!59;UBERON:0003075!1.73e-38!86;UBERON:0007284!1.73e-38!86;UBERON:0002346!1.04e-37!90;UBERON:0004121!1.44e-33!169;UBERON:0000924!1.73e-33!173;UBERON:0006601!1.73e-33!173;UBERON:0002780!1.59e-32!41;UBERON:0001890!1.59e-32!41;UBERON:0006240!1.59e-32!41;UBERON:0003080!2.64e-31!42;UBERON:0001893!2.78e-30!34;UBERON:0002020!2.96e-30!34;UBERON:0003528!2.96e-30!34;UBERON:0000153!6.05e-30!129;UBERON:0007811!6.05e-30!129;UBERON:0000033!1.93e-29!123;UBERON:0002791!2.37e-29!33;UBERON:0001869!8.99e-29!32;UBERON:0003056!4.79e-27!61;UBERON:0000956!1.99e-22!25;UBERON:0000203!1.99e-22!25;UBERON:0002619!7.52e-22!22;UBERON:0001950!4.06e-20!20;UBERON:0000064!2.92e-14!219;UBERON:0003076!4.14e-12!15;UBERON:0003057!4.14e-12!15;UBERON:0000062!2.15e-11!511;UBERON:0000481!3.34e-11!347;UBERON:0000025!3.59e-11!194;UBERON:0000922!8.16e-11!612;UBERON:0004732!1.64e-10!13;UBERON:0000468!1.70e-10!659;UBERON:0000477!1.94e-10!286;UBERON:0000483!3.36e-10!309;UBERON:0000119!4.18e-10!312;UBERON:0004733!9.94e-10!12;UBERON:0002028!9.94e-10!12;UBERON:0007277!9.94e-10!12;UBERON:0000467!1.06e-09!625;UBERON:0002050!1.15e-09!605;UBERON:0005423!1.15e-09!605;UBERON:0000480!1.39e-09!626;UBERON:0002420!1.66e-09!9;UBERON:0007245!1.66e-09!9;UBERON:0010009!1.66e-09!9;UBERON:0010011!1.66e-09!9;UBERON:0000454!1.66e-09!9;UBERON:0000923!2.28e-09!604;UBERON:0005291!2.28e-09!604;UBERON:0006598!2.28e-09!604;UBERON:0002532!2.28e-09!604;UBERON:0004111!2.30e-09!241;UBERON:0002308!3.17e-09!9;UBERON:0000125!3.17e-09!9;UBERON:0000475!1.19e-08!365;UBERON:0001871!1.32e-08!7;UBERON:0009663!1.24e-07!7;UBERON:0002680!1.98e-07!9;UBERON:0001895!1.98e-07!9;UBERON:0010092!1.98e-07!9;UBERON:0000200!6.24e-07!6 | ||
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| ||
|short_description=p1@LPHN3 | |short_description=p1@LPHN3 | ||
}} | }} |
Latest revision as of 04:20, 18 September 2015
Short description: | p1@LPHN3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LPHN3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -466bp_to_uc003hcq.3, uc010ihg.1_5end |
EntrezGene: | LPHN3 |
HGNC: | 20974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data