FFCP PHASE1:Hg19::chr7:29603436..29603471,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222171 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22310 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IV56,A4D1A1 | |||
|association_with_transcript=9bp_to_ENST00000319694,NM_175887,uc003tac.1_5end | |||
|cluster_id=chr7:29603436..29603471,+ | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_1_at_PRR15_5end | |||
|id=chr7:29603436..29603471,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.30e-14!254 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.09e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.18e-09,253;CL:0000349,6.47e-09,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.62e-15!106;DOID:0050687!4.58e-09!143;DOID:299!2.42e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.10e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.83e-11,106;DOID:299,1.18e-10,25;DOID:0050687,3.19e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000466!1.80e-12!126;UBERON:0004119!8.51e-12!169;UBERON:0000925!8.51e-12!169;UBERON:0006595!8.51e-12!169;UBERON:0004921!4.41e-11!129;UBERON:0004185!4.41e-11!129;UBERON:0005631!6.37e-11!14;UBERON:0000158!6.37e-11!14;UBERON:0000464!9.58e-11!104;UBERON:0003886!3.78e-10!63;UBERON:0001007!7.78e-10!155;UBERON:0001555!7.78e-10!155;UBERON:0007026!7.78e-10!155;UBERON:0002553!8.30e-10!70;UBERON:0000077!1.56e-09!130;UBERON:0002323!2.48e-09!46;UBERON:0005409!2.15e-08!35;UBERON:0000160!2.16e-08!27;UBERON:0005156!2.89e-08!59;UBERON:0000990!2.89e-08!59;UBERON:0004458!5.62e-08!49;UBERON:0009569!6.48e-08!113;UBERON:0003133!2.43e-07!48;UBERON:0003124!4.32e-07!7;UBERON:0001048!7.68e-07!168;UBERON:0000478!8.73e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.23e-10;22!UBERON:0005631;8.28e-10;10!UBERON:0000158;8.28e-10;10!UBERON:0000160;3.94e-09;17!UBERON:0000478;9.85e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.95e-14,14;UBERON:0000158,3.95e-14,14;UBERON:0003124,1.23e-09,7;UBERON:0000160,3.30e-09,17;UBERON:0000478,1.21e-08,24;UBERON:0005409,1.75e-08,25;UBERON:0009569,3.72e-08,112;UBERON:0002100,7.11e-08,199;UBERON:0005177,1.41e-07,101;UBERON:0004871,2.26e-07,8;UBERON:0004119,3.61e-07,160;UBERON:0000925,3.61e-07,160;UBERON:0006595,3.61e-07,160;UBERON:0004921,5.07e-07,118 | |||
|phase1_expression=6.17706489519893,1.07050261945492,3.38290569830331,5.00366491765652,0.446961094427288,6.97870819280295,7.59899634504932,0,0,0,0,52.2074879391112,54.3359975150614,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,1.54816123316076,0.919421224478927,0,1.84877005083394,0,0,1.76160263600908,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,11.8912182514483,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.175669571386252,1.37528029272598,1.45718115317017,0.370784442784429,0,0,0.26591592103773,0,0,0,0.198762407366705,0,0.347140501607594,1.69592382577203,1.25849830862972,0,2.71693456497854,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0.949265659568129,0,0,0,0,4.96971951695318,1.8994576749687,0,1.43418310374407,0.709336764396714,3.36406560085384,0,0.98667019366864,3.11211035399766,5.79255889899659,6.53847612453835,1.21085942115945,3.45705554687999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,13.6524204290704,30.181961956282,0,0.125118519871964,0,0,0,0,6.12533789064114,0,0,0.423863802319124,0,0,0.257640540045629,0.558350568994769,0,0.194874010322397,0,0.0920498986422993,0,0,0.10075209822764,0,1.54608682530637,0,0.860413786167011,2.43947412259191,2.65059536642971,2.67246068599892,1.24393266018445,4.03713361401005,1.82488679537915,0,0,0,0,0,0.354920400119532,0.505754070234305,0,0.661763836394364,0.217879444092406,0.237270619111097,0.808987848960987,0.196221465125346,0.38474715694639,0,0,4.9388881359768,7.3504355692771,0,0,0,0,9.59309820636286,1.88724591328378,0.878002283269004,1.1240175325762,2.01057944823262,0.185176890317059,0.325808305310325,0,0,0,5.16598254637615,0.144366447761074,0.462985512576611,0,12.6432703673484,5.15091697256924,0,0,0,0.93733833986777,0,0.141775097242386,0.268675568108545,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,2.45616259939778,0,0,0.26593811658487,1.04007436911366,0,1.41849132023278,0.532844358032199,2.85955987316295,0.542621605391443,0,0,5.33087923113819,0,0.602878754119172,0,0.799783929456456,0,0,0,0.239624855491583,0,0,1.59259437334337,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.468565659970853,1.50473049863859,4.5481500811197,4.1389228517002,0,1.10621501125022,0,0,0,0,0,0,95.1820574341255,54.923695038464,113.69875029196,10.4205279283886,0.767309866440312,4.2099014164961,6.02254001501795,2.04682899626681,0.804269605718038,4.45254199334973,0.308419387605311,0.710246901252508,0,0,0.232420756919918,6.5264102779476,1.40354529212299,3.59115856849996,0,0,0,8.57279264524082,3.85076685522074,4.70609861506113,1.46139224653261,0.949964660035881,0,0,0,0,0,1.50506932156456,7.13653564526107,12.4661401339309,1.56712328305525,0,0,0.256450125116389,1.31205858279882,0,2.06082023295445,0,0,0,0,19.2820715812991,0.193341436584244,0,0,0.413509717453592,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0.384380134730212,0.255225424989168,1.4162089319777,0.464845549297286,0,0,0.308033580176089,0,0,0.55597265731176,1.28812398067792,0,0,4.95638504201945,1.02359116524534,0,0,0,0,1.92175920815238,0.589062011728432,0.808729926293264,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0.876901770507525,0.578775534266688,0,1.62328301570163,0,2.25356482025793,0.143411352204052,0.196498082026242,1.78335525740625,0.354761064070598,0,0,0.379473173765715,1.39973888097993,0.673554789078584,0.670302275535787,1.08890984861323,1.97701981631236,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.9952810563371,0.293016358543788,0,0,0,87.1417369292569,43.3568434015652,104.741799415838,0,0.281338832821026,0,0,0,1.79323189425963,10.4987887901836,0.251932747854276,0,0,0.311039587661807,1.3480252672099,13.7846304500219,0,3.55116260292961,0,0,0,0.185536196323703,0,5.20855522170466,13.6437599994065,0,1.593108275997,0,6.38246740773428,0,0,0,0,0,0,0,0.295547618953547,0,0,8.6442721452734,6.07907042179997,0,0.69169171316418,2.60297168788339,5.10642648033438,60.6102203490647,23.6321790976805,53.8365123778821,0,0,0,0,0,0,0,0,1.47698645169619,10.7733653385037,5.08871057162187,0,52.7488823471608,47.4132545737898,50.7155020294909,0,0,0,0.134802265961354,0.802577647298789,0,0,2.54364004611717,0,1.97292201424695,25.4080503702194,0,0.063186579628488,0.300646838828985,0.622129148383483,3.98792323624311,0.661983911750998,2.82539626566503,4.77889719091835,8.25367683486399,0,3.12407529003236,0.195984794828755,0.522355239482415,9.2605134168276,0,0.387025325156341,0.219267951258557,0.164230914106418,0.193978032976839,0,0.225980740780532,0,0,0,16.4263161497235,0.64127056201227,8.75157278431345,0.799238438328521,13.4004087953319,0,0,2.16082196982225,0.124252535565433,3.77110455386873,0,0,0,0,0,0,0,0,0,0,0,0,4.991975012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| |||
|short_description=p1@PRR15 | |||
}} |
Latest revision as of 04:30, 18 September 2015
Short description: | p1@PRR15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRR15_5end |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | 9bp_to_ENST00000319694, NM_175887, uc003tac.1_5end |
EntrezGene: | PRR15 |
HGNC: | 22310 |
UniProt: | Q8IV56A4D1A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.18e-09 | 253 |
extraembryonic cell | 6.47e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.95e-14 | 14 |
membranous layer | 3.95e-14 | 14 |
chorion | 1.23e-09 | 7 |
intestine | 3.30e-09 | 17 |
extraembryonic structure | 1.21e-08 | 24 |
gastrointestinal system | 1.75e-08 | 25 |
subdivision of trunk | 3.72e-08 | 112 |
trunk | 7.11e-08 | 199 |
trunk region element | 1.41e-07 | 101 |
somatic layer of lateral plate mesoderm | 2.26e-07 | 8 |
endoderm-derived structure | 3.61e-07 | 160 |
endoderm | 3.61e-07 | 160 |
presumptive endoderm | 3.61e-07 | 160 |
subdivision of digestive tract | 5.07e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.83e-11 | 106 |
adenocarcinoma | 1.18e-10 | 25 |
cell type cancer | 3.19e-07 | 143 |