FFCP PHASE1:Hg19::chr1:161059154..161059172,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=81607 | |EntrezGene=81607 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=19688 | |HGNC=19688 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=142bp_to_ENST00000460234_5end | |association_with_transcript=142bp_to_ENST00000460234_5end | ||
|cluster_id=chr1:161059154..161059172,- | |||
|coexpression_cluster_id=C433 | |coexpression_cluster_id=C433 | ||
|description=CAGE_peak_6_at_PVRL4_5end | |description=CAGE_peak_6_at_PVRL4_5end | ||
Latest revision as of 04:36, 18 September 2015
| Short description: | p6@PVRL4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_PVRL4_5end |
| Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
| Association with transcript: | 142bp_to_ENST00000460234_5end |
| EntrezGene: | PVRL4 |
| HGNC: | 19688 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@PVRL4 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| macrophage | 1.22e-91 | 6 |
| immature conventional dendritic cell | 2.29e-33 | 5 |
| common dendritic progenitor | 2.29e-33 | 5 |
| monopoietic cell | 2.04e-29 | 59 |
| monocyte | 2.04e-29 | 59 |
| monoblast | 2.04e-29 | 59 |
| promonocyte | 2.04e-29 | 59 |
| macrophage dendritic cell progenitor | 1.81e-28 | 61 |
| myeloid lineage restricted progenitor cell | 2.43e-26 | 66 |
| granulocyte monocyte progenitor cell | 5.95e-26 | 67 |
Showing 1 to 10 of 24 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 6.54e-23 | 76 |
| bone element | 3.01e-21 | 82 |
| skeletal element | 2.27e-19 | 90 |
| immune system | 9.53e-19 | 93 |
| hematopoietic system | 8.57e-18 | 98 |
| blood island | 8.57e-18 | 98 |
| skeletal system | 1.94e-17 | 100 |
| hemolymphoid system | 3.81e-16 | 108 |
| musculoskeletal system | 2.16e-10 | 167 |
| lateral plate mesoderm | 1.68e-08 | 203 |
Showing 1 to 10 of 10 entries
