FFCP PHASE1:Hg19::chr10:43572508..43572523,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5979 | |EntrezGene=5979 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9967 | |HGNC=9967 | ||
|TSSclassifier=strong | |||
|UniProt=C9JYL6,P07949,Q9BTX6 | |UniProt=C9JYL6,P07949,Q9BTX6 | ||
|association_with_transcript=0bp_to_ENST00000498820,NM_020630,NM_020975,uc001jak.1,uc001jal.2_5end | |association_with_transcript=0bp_to_ENST00000498820,NM_020630,NM_020975,uc001jak.1,uc001jal.2_5end | ||
|cluster_id=chr10:43572508..43572523,+ | |||
|description=CAGE_peak_1_at_RET_5end | |description=CAGE_peak_1_at_RET_5end | ||
|id=chr10:43572508..43572523,+ | |id=chr10:43572508..43572523,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.89e-07;5 | |ontology_enrichment_celltype_v019=CL:0002322;3.89e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.41e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.39e-10;82 | |ontology_enrichment_development_v019=UBERON:0006601;3.39e-10;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;3.99e-07;10!DOID:5093;5.38e-07;4!DOID:1612;5.38e-07;4 | |ontology_enrichment_disease_v019=DOID:171;3.99e-07;10!DOID:5093;5.38e-07;4!DOID:1612;5.38e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:171,3.98e-07,10;DOID:5093,5.40e-07,4;DOID:1612,5.40e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.68e-34!115;UBERON:0001049!4.64e-20!57;UBERON:0005068!4.64e-20!57;UBERON:0006241!4.64e-20!57;UBERON:0007135!4.64e-20!57;UBERON:0001017!1.76e-17!82;UBERON:0005743!4.44e-17!86;UBERON:0000073!9.06e-17!94;UBERON:0001016!9.06e-17!94;UBERON:0002616!1.13e-15!59;UBERON:0002346!1.80e-14!90;UBERON:0000955!4.08e-14!69;UBERON:0006238!4.08e-14!69;UBERON:0003075!2.49e-13!86;UBERON:0007284!2.49e-13!86;UBERON:0003080!4.51e-13!42;UBERON:0002780!8.67e-13!41;UBERON:0001890!8.67e-13!41;UBERON:0006240!8.67e-13!41;UBERON:0002020!1.49e-11!34;UBERON:0003528!1.49e-11!34;UBERON:0001893!3.22e-11!34;UBERON:0000924!5.06e-11!173;UBERON:0006601!5.06e-11!173;UBERON:0002791!1.05e-10!33;UBERON:0001869!2.59e-10!32;UBERON:0004121!4.02e-10!169;UBERON:0001950!6.55e-09!20;UBERON:0000956!8.05e-09!25;UBERON:0000203!8.05e-09!25;UBERON:0000153!1.03e-08!129;UBERON:0007811!1.03e-08!129;UBERON:0003076!1.51e-08!15;UBERON:0003057!1.51e-08!15;UBERON:0002619!2.33e-08!22;UBERON:0000922!4.13e-08!612;UBERON:0000033!8.01e-08!123;UBERON:0000468!9.47e-08!659;UBERON:0003056!3.58e-07!61;UBERON:0004733!9.93e-07!12;UBERON:0002028!9.93e-07!12;UBERON:0007277!9.93e-07!12 | |ontology_enrichment_uberon=UBERON:0007023!4.68e-34!115;UBERON:0001049!4.64e-20!57;UBERON:0005068!4.64e-20!57;UBERON:0006241!4.64e-20!57;UBERON:0007135!4.64e-20!57;UBERON:0001017!1.76e-17!82;UBERON:0005743!4.44e-17!86;UBERON:0000073!9.06e-17!94;UBERON:0001016!9.06e-17!94;UBERON:0002616!1.13e-15!59;UBERON:0002346!1.80e-14!90;UBERON:0000955!4.08e-14!69;UBERON:0006238!4.08e-14!69;UBERON:0003075!2.49e-13!86;UBERON:0007284!2.49e-13!86;UBERON:0003080!4.51e-13!42;UBERON:0002780!8.67e-13!41;UBERON:0001890!8.67e-13!41;UBERON:0006240!8.67e-13!41;UBERON:0002020!1.49e-11!34;UBERON:0003528!1.49e-11!34;UBERON:0001893!3.22e-11!34;UBERON:0000924!5.06e-11!173;UBERON:0006601!5.06e-11!173;UBERON:0002791!1.05e-10!33;UBERON:0001869!2.59e-10!32;UBERON:0004121!4.02e-10!169;UBERON:0001950!6.55e-09!20;UBERON:0000956!8.05e-09!25;UBERON:0000203!8.05e-09!25;UBERON:0000153!1.03e-08!129;UBERON:0007811!1.03e-08!129;UBERON:0003076!1.51e-08!15;UBERON:0003057!1.51e-08!15;UBERON:0002619!2.33e-08!22;UBERON:0000922!4.13e-08!612;UBERON:0000033!8.01e-08!123;UBERON:0000468!9.47e-08!659;UBERON:0003056!3.58e-07!61;UBERON:0004733!9.93e-07!12;UBERON:0002028!9.93e-07!12;UBERON:0007277!9.93e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.72e-12;20!UBERON:0002619;8.09e-11;22!UBERON:0000073;8.59e-10;53!UBERON:0002616;8.59e-10;53!UBERON:0000956;4.73e-09;25!UBERON:0000203;4.73e-09;25!UBERON:0001893;9.36e-09;34!UBERON:0002298;9.98e-09;6!UBERON:0003528;1.79e-08;34!UBERON:0002020;1.79e-08;34!UBERON:0004733;2.22e-08;12!UBERON:0002028;2.22e-08;12!UBERON:0000922;2.51e-08;49!UBERON:0001869;5.25e-08;32!UBERON:0002791;5.40e-08;32!UBERON:0002780;6.40e-08;41!UBERON:0001890;6.40e-08;41!UBERON:0007023;9.51e-08;114!UBERON:0004732;1.46e-07;13!UBERON:0003135;6.11e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001950;2.72e-12;20!UBERON:0002619;8.09e-11;22!UBERON:0000073;8.59e-10;53!UBERON:0002616;8.59e-10;53!UBERON:0000956;4.73e-09;25!UBERON:0000203;4.73e-09;25!UBERON:0001893;9.36e-09;34!UBERON:0002298;9.98e-09;6!UBERON:0003528;1.79e-08;34!UBERON:0002020;1.79e-08;34!UBERON:0004733;2.22e-08;12!UBERON:0002028;2.22e-08;12!UBERON:0000922;2.51e-08;49!UBERON:0001869;5.25e-08;32!UBERON:0002791;5.40e-08;32!UBERON:0002780;6.40e-08;41!UBERON:0001890;6.40e-08;41!UBERON:0007023;9.51e-08;114!UBERON:0004732;1.46e-07;13!UBERON:0003135;6.11e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.36e-28,114;UBERON:0001049,8.68e-20,56;UBERON:0005068,8.68e-20,56;UBERON:0006241,8.68e-20,56;UBERON:0007135,8.68e-20,56;UBERON:0000073,3.38e-17,53;UBERON:0002616,3.38e-17,53;UBERON:0001016,4.53e-16,89;UBERON:0001017,1.71e-15,81;UBERON:0002346,8.70e-15,86;UBERON:0003075,6.67e-13,82;UBERON:0007284,6.67e-13,82;UBERON:0000955,9.49e-13,68;UBERON:0006238,9.49e-13,68;UBERON:0001950,2.22e-12,20;UBERON:0010371,3.79e-12,104;UBERON:0004121,4.31e-12,171;UBERON:0000924,4.31e-12,171;UBERON:0006601,4.31e-12,171;UBERON:0011216,4.94e-12,223;UBERON:0003076,1.94e-11,15;UBERON:0003057,1.94e-11,15;UBERON:0003528,6.31e-11,34;UBERON:0002020,6.31e-11,34;UBERON:0002619,6.75e-11,22;UBERON:0002780,7.16e-11,41;UBERON:0001890,7.16e-11,41;UBERON:0003080,7.16e-11,41;UBERON:0006240,7.16e-11,41;UBERON:0001893,1.68e-10,34;UBERON:0002791,3.36e-09,32;UBERON:0001869,3.42e-09,32;UBERON:0000956,4.05e-09,25;UBERON:0000203,4.05e-09,25;UBERON:0002298,8.83e-09,6;UBERON:0004733,1.95e-08,12;UBERON:0002028,1.95e-08,12;UBERON:0007277,1.95e-08,12;UBERON:0004732,1.30e-07,13;UBERON:0003135,3.56e-07,11 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,1.0007329835313,0,0,2.53299878168311,0,1.30592814099919,0.245733936501509,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.626909442956176,0.572471974262113,0.136874425072884,0.87879847716362,0,0,0,0,0.383829398097213,0,0,0.30120591877825,0,0,0,0.880801318004542,0,0.200544447470142,0,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,1.1507695692886,0.512321413058201,0.47296445977717,0,0.645484683583826,0,0,0,0.449446968890169,0.306083892370903,0,0,0.659702600373432,0,0.852449501065388,0.580418477257168,0.56738522469114,0.622822248995575,0.502497330513487,0,0.434377689410233,1.21079900526674,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.764546456250458,3.96513985737078,2.24203425192614,0.263384084775077,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0.25618263945135,0.260118695119756,0.493313713811028,0,0,0,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0,0,1.57174890597255,0,0,0,0,0,24.5645343034502,18.3038371449641,11.8866400425461,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,0.272746120590835,0.286804595389004,5.2448693635726,8.21684563593209,5.11253348625881,4.14644220061482,6.05570042101508,14.2341170039574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,24.5706804169407,10.0434284135839,0,0.368965315629341,0,0.329250856225877,1.1240175325762,0.201057944823262,0,0,0,0,0,0,0,0,0.190254152234598,25.2865407346968,22.3206402144667,0,0.234004265139238,0.148631162288728,0,0.503946384596579,0.425325291727159,0,0,1.15014803749563,0,3.25779205848936,27.7819674824635,35.1652686337386,46.7097003677606,0,0.381988425558278,0,0,0,0,0.571652865261156,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0.773288812777695,0,0.637938751653163,0,0,0.828831026872071,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,6.2656370388077,5.49029478097369,0.82707210449155,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0.232420756919918,0,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0.15403067420883,0,0,0,0,0,0.431831832204279,15.4227252690289,0,0,0,0,0,0,0,0.256450125116389,0,0,0.412164046590889,0,0,0,0,1.6068392984416,0.580024309752732,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.638063562472921,0.50578890427775,0.464845549297286,0,1.3940745403212,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,1.70599442741899,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,1.08890984861323,0.470719003883896,0,1.68471475667626,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,7.69983884210687,0,0,2.01976898167023,0,0.159426272728822,0,0,0.211673582723883,119.136252080762,0,0,0.156679895773023,0,0,0.963528450622197,0.403599414382095,178.429573592247,0,57.4540229256816,91.2598520201057,63.736372133949,0,0,0,0,0,0,0,0.879049075631364,0,0,7.38753981696674,0,0,0.307160702099232,1.9882952955326,0.844016498463076,0,0.494411622680279,9.92289418201569,1.39473591775749,2.48655523978033,3.77899121781414,0,0,0,0,0,0,2.46608514092334,0,0,2.90799823828566,1.39152147242777,0,66.4090790767345,13.6437599994065,0.724999575434793,0,0,0.236387681767936,0.344743373241465,0,5.03512485306548,0,0.964771509003264,9.15490417902499,2.76448149828062,8.27533333069933,0.87754158861589,0,0,2.38545801361771,0,0,0,0,0.957003479195758,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,3.27292988662355,8.55442202907076,0,0,0,1.34802265961354,2.40773294189637,2.10838001152805,0,0.978323094660449,1.21390189767046,1.97292201424695,8.46935012340647,1.22429104652196,0.126373159256976,0.450970258243478,0.414752765588989,0.664653872707185,0,0.627865836814451,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,1.64881328030313,0.176512253383001,3.61569185248852,0,0,1.70939149080872,0.195551382734803,0,1.49417096317547,0.19980960958213,0.576361668616424,0.458146384663663,0,0,0,0.707082103850386,0.407712618220842,0.941425616810999,0,0,1.80126086612937,1.36905378891993,2.55493176133945,0.429765441419957,0,4.74780082162832,8.70809611244398,0.717873024576814,0.199679000498991,1.28767814440971,0.223171457441873,0.470284307407084,0,0,0,0,0,0.688992370603241,0,0,0.544813624446302,8.03765742325096,4.53880140770872,4.15440338029185,0,2.32140586367385,2.12623448303086,0.670869375198532,0.236417121897595,8.91727998294968,0,0,0,0.714695326373367,0,0,0,0.864221491201268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| ||
|short_description=p1@RET | |short_description=p1@RET | ||
}} | }} |
Latest revision as of 05:37, 18 September 2015
Short description: | p1@RET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RET_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000498820, NM_020630, NM_020975, uc001jak.1, uc001jal.2_5end |
EntrezGene: | RET |
HGNC: | 9967 |
UniProt: | C9JYL6P07949Q9BTX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.41e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.98e-07 | 10 |
thoracic cancer | 5.40e-07 | 4 |
breast cancer | 5.40e-07 | 4 |