FFCP PHASE1:Hg19::chr5:57878895..57878929,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115827 | |EntrezGene=115827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30269 | |HGNC=30269 | ||
|TSSclassifier=strong | |||
|UniProt=Q96E17 | |UniProt=Q96E17 | ||
|association_with_transcript=-9bp_to_NM_138453,uc003jrp.2_5end | |association_with_transcript=-9bp_to_NM_138453,uc003jrp.2_5end | ||
|cluster_id=chr5:57878895..57878929,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_RAB3C_5end | |description=CAGE_peak_1_at_RAB3C_5end | ||
|id=chr5:57878895..57878929,+ | |id=chr5:57878895..57878929,+ | ||
|ontology_enrichment_celltype=CL:0000047!5.33e-08!8 | |ontology_enrichment_celltype=CL:0000047!5.33e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;9.16e-10;6!CL:0000404;9.16e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.00e-09,6;CL:0000031,1.00e-09,6;CL:0000404,1.00e-09,6;CL:0000047,1.29e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.34e-19;82!CL:0000031;9.16e-10;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;4.74e-46;41!UBERON:0001890;4.74e-46;41!UBERON:0001869;2.77e-44;32!UBERON:0003528;3.38e-44;34!UBERON:0002020;3.38e-44;34!UBERON:0001893;4.18e-44;34!UBERON:0002791;8.06e-44;32!UBERON:0002619;3.04e-42;22!UBERON:0000073;1.01e-41;53!UBERON:0002616;1.01e-41;53!UBERON:0001950;1.54e-38;20!UBERON:0000956;1.91e-36;25!UBERON:0000203;1.91e-36;25!UBERON:0000955;3.68e-30;68!UBERON:0001017;1.45e-29;75!UBERON:0001016;3.87e-28;83!UBERON:0002420;2.46e-17;9!UBERON:0007245;2.46e-17;9!UBERON:0010009;2.46e-17;9!UBERON:0010011;2.46e-17;9!UBERON:0000454;2.46e-17;9!UBERON:0000125;4.62e-17;9!UBERON:0002308;4.62e-17;9!UBERON:0007023;4.18e-16;114!UBERON:0009663;1.03e-13;7!UBERON:0001871;1.80e-13;6!UBERON:0001894;2.38e-13;7!UBERON:0004732;3.66e-13;13!UBERON:0000200;1.31e-12;6!UBERON:0011216;5.75e-12;132!UBERON:0004733;7.94e-12;12!UBERON:0002028;7.94e-12;12!UBERON:0002298;1.42e-11;6!UBERON:0000349;7.88e-11;5!UBERON:0001872;1.95e-10;5!UBERON:0002021;2.72e-10;5!UBERON:0000369;2.91e-09;4!UBERON:0002435;2.91e-09;4!UBERON:0000204;2.91e-09;4!UBERON:0003296;3.01e-08;4!UBERON:0010133;3.01e-08;4!UBERON:0002784;3.04e-08;4!UBERON:0002680;1.55e-07;9!UBERON:0001895;1.55e-07;9!UBERON:0005383;2.33e-07;3!UBERON:0005382;2.33e-07;3!UBERON:0001870;2.74e-07;3!UBERON:0010314;3.36e-07;132!UBERON:0000988;7.28e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.24e-84,89;UBERON:0001017,2.53e-84,81;UBERON:0001049,1.14e-79,56;UBERON:0005068,1.14e-79,56;UBERON:0006241,1.14e-79,56;UBERON:0007135,1.14e-79,56;UBERON:0000073,7.27e-75,53;UBERON:0002616,7.27e-75,53;UBERON:0000955,2.86e-67,68;UBERON:0006238,2.86e-67,68;UBERON:0002780,2.18e-64,41;UBERON:0001890,2.18e-64,41;UBERON:0003080,2.18e-64,41;UBERON:0006240,2.18e-64,41;UBERON:0003075,4.17e-58,82;UBERON:0007284,4.17e-58,82;UBERON:0002346,1.32e-54,86;UBERON:0003528,3.53e-52,34;UBERON:0002020,3.53e-52,34;UBERON:0001893,3.72e-52,34;UBERON:0007023,3.52e-50,114;UBERON:0001869,2.32e-49,32;UBERON:0002791,1.03e-48,32;UBERON:0003056,5.64e-46,61;UBERON:0010371,5.67e-44,104;UBERON:0002619,3.02e-42,22;UBERON:0011216,5.41e-39,223;UBERON:0004121,1.01e-38,171;UBERON:0000924,1.01e-38,171;UBERON:0006601,1.01e-38,171;UBERON:0001950,1.55e-38,20;UBERON:0000956,1.90e-36,25;UBERON:0000203,1.90e-36,25;UBERON:0010314,7.91e-34,132;UBERON:0000025,2.46e-20,192;UBERON:0002420,2.58e-17,9;UBERON:0007245,2.58e-17,9;UBERON:0010009,2.58e-17,9;UBERON:0010011,2.58e-17,9;UBERON:0000454,2.58e-17,9;UBERON:0000125,4.80e-17,9;UBERON:0002308,4.80e-17,9;UBERON:0003076,4.72e-16,15;UBERON:0003057,4.72e-16,15;UBERON:0004111,3.17e-14,240;UBERON:0009663,1.06e-13,7;UBERON:0001871,1.72e-13,6;UBERON:0001894,2.36e-13,7;UBERON:0006222,2.36e-13,7;UBERON:0004732,3.61e-13,13;UBERON:0000200,1.29e-12,6;UBERON:0004733,7.95e-12,12;UBERON:0002028,7.95e-12,12;UBERON:0007277,7.95e-12,12;UBERON:0002298,1.45e-11,6;UBERON:0000349,7.96e-11,5;UBERON:0001872,2.01e-10,5;UBERON:0002021,2.77e-10,5;UBERON:0000922,7.24e-10,592;UBERON:0000923,8.82e-10,560;UBERON:0010316,8.82e-10,560;UBERON:0005291,8.82e-10,560;UBERON:0006598,8.82e-10,560;UBERON:0010317,8.82e-10,560;UBERON:0002532,8.82e-10,560;UBERON:0002050,1.55e-09,564;UBERON:0000483,2.84e-09,306;UBERON:0000369,2.91e-09,4;UBERON:0002435,2.91e-09,4;UBERON:0000204,2.91e-09,4;UBERON:0010082,2.91e-09,4;UBERON:0000119,5.00e-09,309;UBERON:0005423,1.56e-08,581;UBERON:0003296,2.93e-08,4;UBERON:0010133,2.93e-08,4;UBERON:0002784,2.98e-08,4;UBERON:0002680,1.55e-07,9;UBERON:0001895,1.55e-07,9;UBERON:0010092,1.55e-07,9;UBERON:0005383,2.33e-07,3;UBERON:0005382,2.33e-07,3;UBERON:0001870,2.74e-07,3;UBERON:0000988,7.43e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736555271975129,0.632924774881769,0,0,0,0,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.05521314310933,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82960559194393,1.19276791489337,0.69716365721711,1.14027160516907,0.504641701751257,3.6497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72631925345123,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97065295158377,0.616339038092582,0.621984346622316,1.00883967391873,1.00993946741104,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,10.4111883086097,3.09315525111078,9.04587832805483,4.46557126157214,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94007937463814,0,0.677167111206413,0,0,0.851692475380653,0,1.53620382154229,1.78940886313933,0.834245708559542,0.19538809540204,0,0,0.811367035427949,0,2.81974010175699,0,2.93016358543788,0,0,0,0,0,0,87.4849930034342,100.015955067875,0,0,0.422250816255987,0.398495976502139,0.276283915531148,2.01546198283421,0,0,0,0,0,0,0.887790650732402,0,0,54.2826337813322,60.0209595107178,29.9420697001791,0,0,0,0,0,0,14.823965049383,1.45802306691627,31.5997490778592,108.060449069288,107.813216131115,67.1359639795166,39.8085335752409,27.1903809437264,69.5451708978093,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0.995261931078505,2.0345239835768,1.22206028986725,2.37216902944498,1.11207545051853,0.626531697032732,10.5145767449856,0,72.6219781748551,0,0,0,0.789168805698781,4.83962864194656,28.7708395932661,3.91756793696625,0.60129367765797,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,8.3612874088797,0,0,125.35537599264,0,0,0.213452994739353,0.19980960958213,0,0,11.6684598546136,0.14405479798815,0,0,0,0,0,0,72.6508549338845,17.2500777403911,0,0,0,0.837847203816763,0.687481272035051,2.87149209830726,0,0.429226048136571,0.223171457441873,0.268733889946905,0,0,0,0,0.0674035438541849,0,0,147.117492614721,58.5674646279775,3.05430982083536,5.63911690048659,6.23160507043778,0,0,127.209571641904,0,0.157611414598396,0.104909176269996,0,11.2951023779692,0,1.42939065274673,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,1.46552233678082,0,53.5231439336819,45.8847128047134,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,164.808681473859,101.769904928237,73.7374581861284,24.083186218983,21.9639522042968,32.228033126578,2.35192679391592,0,0.151649117541648,0,0,0,6.37652525887631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,72.7239374158104,0.194860308839388,0,0,0.327609848846413,0,0,0.59996218756479,0,0,0,0,0,0,11.8941765312396,14.556349538552,0,13.9788336885778,0,0.850299680406731,0,0,0,0,14.4102734691385,0,0,113.55726997054,111.940295297212,44.5378466769452,74.0470074909126,39.5752563068097,43.5690690524573,100.27637593738,8.56616521554926,0,0,0,0,0,0,0,1.65462722368366,0,0,0,0,0,115.354194528218,96.8536842281171,100.036409506573,95.0602994806663,31.1775641140385,0,0,0.175871244359621,0,39.6419358549932,31.6106698885695,32.7761426287781,62.6071026216068,0.0887023701626388,0,0,101.68272053334,58.0773590559957,0,0,0.706437835654626,167.956565620206,0,2.73947616152849,0,0,3.07349139959622,9.95485753916178,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,10.7612153192569,0,0.237840181555137,0,9.78470599034319,2.8682940277668,1.23478652972711,1.09279780251979,2.82190377816914,0.735444965261716,15.0832990145041,21.397622915529,5.64388160621463,19.019507741253,0,0,0.0644578879735772,0,0,0,0,1.46067277649303,0,2.58011249672612,0,53.9172517213954,30.9808990141668,4.7612415646386,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0.459474497674225,0,0.833565680400634,0.535928260312357,88.7211300220894,22.2380941103075,0.213233981900981,0.476128862927481,0,0,0,0.190941474834495,0.202117188958219,0,0,0.26940821205835,0.645499848534087,0.665320713092027,0,0.213454691755431,0,0,0,1.1001729976458,0.406896178315738,2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| ||
|short_description=p1@RAB3C | |short_description=p1@RAB3C | ||
}} | }} |
Latest revision as of 06:31, 18 September 2015
Short description: | p1@RAB3C |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB3C_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -9bp_to_NM_138453, uc003jrp.2_5end |
EntrezGene: | RAB3C |
HGNC: | 30269 |
UniProt: | Q96E17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.00e-09 | 6 |
neuroblast | 1.00e-09 | 6 |
electrically signaling cell | 1.00e-09 | 6 |
neuronal stem cell | 1.29e-09 | 8 |