FFCP PHASE1:Hg19::chr12:40619391..40619402,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:40619391..40619402,+
|short_description=p8@LRRK2
|description=CAGE_peak_8_at_LRRK2_5end
|association_with_transcript=0bp_to_ENST00000474202_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=120892 | |EntrezGene=120892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18618 | |HGNC=18618 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000474202_5end | |||
|cluster_id=chr12:40619391..40619402,+ | |||
|description=CAGE_peak_8_at_LRRK2_5end | |||
|id=chr12:40619391..40619402,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.38e-14!42;CL:0000860!8.80e-13!45;CL:0000766!3.32e-10!76;CL:0002009!4.96e-09!65;CL:0002194!1.32e-08!63;CL:0000576!1.32e-08!63;CL:0000040!1.32e-08!63;CL:0000559!1.32e-08!63;CL:0000557!2.10e-08!71;CL:0000839!8.72e-08!70 | |||
|ontology_enrichment_celltype_v019=CL:0000775;5.38e-36;3!CL:0000094;6.28e-14;8!CL:0000081;2.76e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.14e-36,3;CL:0000094,3.55e-14,8;CL:0000081,1.83e-10,11 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.69e-07;2!UBERON:0007297;3.69e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.21e-41!115;UBERON:0001893!3.90e-14!34;UBERON:0002780!2.56e-13!41;UBERON:0001890!2.56e-13!41;UBERON:0006240!2.56e-13!41;UBERON:0002791!2.72e-13!33;UBERON:0003080!7.52e-13!42;UBERON:0002020!8.67e-13!34;UBERON:0003528!8.67e-13!34;UBERON:0001869!1.70e-12!32;UBERON:0001049!2.50e-12!57;UBERON:0005068!2.50e-12!57;UBERON:0006241!2.50e-12!57;UBERON:0007135!2.50e-12!57;UBERON:0001950!6.18e-12!20;UBERON:0002616!1.18e-11!59;UBERON:0002619!1.50e-10!22;UBERON:0000956!3.88e-10!25;UBERON:0000203!3.88e-10!25;UBERON:0003075!1.44e-09!86;UBERON:0007284!1.44e-09!86;UBERON:0000955!1.60e-09!69;UBERON:0006238!1.60e-09!69;UBERON:0000200!1.91e-09!6;UBERON:0002346!9.05e-09!90;UBERON:0002390!1.09e-08!102;UBERON:0003061!1.09e-08!102;UBERON:0001017!2.13e-08!82;UBERON:0005743!2.24e-08!86;UBERON:0002193!2.59e-08!112;UBERON:0003056!8.77e-08!61;UBERON:0002371!2.41e-07!80;UBERON:0000062!5.76e-07!511;UBERON:0000073!7.16e-07!94;UBERON:0001016!7.16e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;4.76e-13;1!UBERON:0002135;4.76e-13;1!UBERON:0001389;4.76e-13;1!UBERON:0001301;4.76e-13;1!UBERON:0000026;4.76e-13;1!UBERON:0008784;4.76e-13;1!UBERON:0006058;4.76e-13;1!UBERON:0003663;4.76e-13;1!UBERON:0004256;4.76e-13;1!UBERON:0004708;4.76e-13;1!UBERON:0002101;4.76e-13;1!UBERON:0004709;4.76e-13;1!UBERON:0002529;4.76e-13;1!UBERON:0010538;4.76e-13;1!UBERON:0003661;4.76e-13;1!UBERON:0010890;4.76e-13;1!UBERON:0002471;4.76e-13;1!UBERON:0001383;4.76e-13;1!UBERON:0010758;4.76e-13;1!UBERON:0010707;4.76e-13;1!UBERON:0000978;4.76e-13;1!UBERON:0002103;4.76e-13;1!UBERON:0001665;4.76e-13;1!UBERON:0003823;4.76e-13;1!UBERON:0000154;4.76e-13;1!UBERON:0010709;4.76e-13;1!UBERON:0001873;3.69e-07;2!UBERON:0002360;3.69e-07;2!UBERON:0002702;3.69e-07;2!UBERON:0005090;3.69e-07;2!UBERON:0001630;3.69e-07;2!UBERON:0002133;3.69e-07;2!UBERON:0000094;3.69e-07;2!UBERON:0010743;3.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.76e-13,1;UBERON:0001389,3.76e-13,1;UBERON:0000026,3.76e-13,1;UBERON:0008784,3.76e-13,1;UBERON:0006058,3.76e-13,1;UBERON:0003663,3.76e-13,1;UBERON:0004256,3.76e-13,1;UBERON:0004708,3.76e-13,1;UBERON:0002101,3.76e-13,1;UBERON:0004709,3.76e-13,1;UBERON:0002529,3.76e-13,1;UBERON:0010538,3.76e-13,1;UBERON:0003661,3.76e-13,1;UBERON:0010890,3.76e-13,1;UBERON:0002471,3.76e-13,1;UBERON:0001383,3.76e-13,1;UBERON:0004357,3.76e-13,1;UBERON:0004347,3.76e-13,1;UBERON:0005420,3.76e-13,1;UBERON:0005732,3.76e-13,1;UBERON:0010758,3.76e-13,1;UBERON:0010707,3.76e-13,1;UBERON:0000978,3.76e-13,1;UBERON:0002103,3.76e-13,1;UBERON:0001665,3.76e-13,1;UBERON:0003823,3.76e-13,1;UBERON:0000154,3.76e-13,1;UBERON:0010709,3.76e-13,1;UBERON:0005733,3.76e-13,1;UBERON:0005730,3.76e-13,1;UBERON:0002135,5.38e-13,1;UBERON:0006834,6.06e-13,1;UBERON:0001301,9.73e-13,1;UBERON:0007023,6.46e-09,114;UBERON:0005090,3.28e-07,2;UBERON:0001630,3.28e-07,2;UBERON:0001873,3.48e-07,2;UBERON:0010122,3.48e-07,2;UBERON:0002702,3.70e-07,2;UBERON:0002133,3.93e-07,2;UBERON:0002360,4.42e-07,2;UBERON:0000094,4.42e-07,2;UBERON:0010743,4.42e-07,2 | |||
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| ||
|short_description=p8@LRRK2 | |||
}} | }} |
Latest revision as of 06:50, 18 September 2015
Short description: | p8@LRRK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LRRK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000474202_5end |
EntrezGene: | LRRK2 |
HGNC: | 18618 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.14e-36 | 3 |
granulocyte | 3.55e-14 | 8 |
blood cell | 1.83e-10 | 11 |