FFCP PHASE1:Hg19::chr8:42013399..42013411,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10947 | |EntrezGene=10947 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=570 | |HGNC=570 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=119bp_to_ENST00000523249_5end | |association_with_transcript=119bp_to_ENST00000523249_5end | ||
|cluster_id=chr8:42013399..42013411,+ | |||
|coexpression_cluster_id=C177 | |coexpression_cluster_id=C177 | ||
|description=CAGE_peak_5_at_AP3M2_5end | |description=CAGE_peak_5_at_AP3M2_5end | ||
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|ontology_enrichment_celltype=CL:0000359!9.43e-16!32;CL:0000192!6.60e-14!42;CL:0000514!6.60e-14!42;CL:0000055!5.51e-13!180;CL:0000148!1.63e-11!10;CL:0000541!1.63e-11!10;CL:0000187!4.24e-11!54;CL:1000306!2.75e-10!4;CL:0002547!2.75e-10!4;CL:0000680!2.99e-10!57;CL:0000056!2.99e-10!57;CL:0000355!2.99e-10!57;CL:0000183!9.81e-10!59;CL:0000393!1.72e-09!60;CL:0000211!1.72e-09!60;CL:0002539!8.59e-09!10;CL:0002567!1.27e-08!3;CL:0002494!5.68e-08!16;CL:0000147!7.43e-08!14 | |ontology_enrichment_celltype=CL:0000359!9.43e-16!32;CL:0000192!6.60e-14!42;CL:0000514!6.60e-14!42;CL:0000055!5.51e-13!180;CL:0000148!1.63e-11!10;CL:0000541!1.63e-11!10;CL:0000187!4.24e-11!54;CL:1000306!2.75e-10!4;CL:0002547!2.75e-10!4;CL:0000680!2.99e-10!57;CL:0000056!2.99e-10!57;CL:0000355!2.99e-10!57;CL:0000183!9.81e-10!59;CL:0000393!1.72e-09!60;CL:0000211!1.72e-09!60;CL:0002539!8.59e-09!10;CL:0002567!1.27e-08!3;CL:0002494!5.68e-08!16;CL:0000147!7.43e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.78e-27;10!CL:0002539;1.41e-26;10!CL:0002567;3.89e-23;3!CL:0000147;2.43e-19;14!CL:0002591;8.72e-18;1!CL:0000710;1.18e-13;20!CL:0000359;7.74e-13;32!CL:0000075;3.39e-10;27!CL:0000192;9.69e-08;43!CL:0002077;1.69e-07;34 | |ontology_enrichment_celltype_v019=CL:0000148;6.78e-27;10!CL:0002539;1.41e-26;10!CL:0002567;3.89e-23;3!CL:0000147;2.43e-19;14!CL:0002591;8.72e-18;1!CL:0000710;1.18e-13;20!CL:0000359;7.74e-13;32!CL:0000075;3.39e-10;27!CL:0000192;9.69e-08;43!CL:0002077;1.69e-07;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.86e-27,10;CL:0000541,4.86e-27,10;CL:0002539,1.72e-26,10;CL:0002567,2.94e-23,3;CL:0000147,1.92e-19,14;CL:0002591,1.22e-17,1;CL:0000710,1.01e-13,20;CL:0000359,7.34e-13,32;CL:0000075,3.01e-10,27;CL:0000192,1.39e-09,43;CL:0000514,1.39e-09,43;CL:0002077,3.42e-08,34;CL:0000187,1.72e-07,55;CL:0000680,4.20e-07,58;CL:0000056,4.20e-07,58;CL:0000355,4.20e-07,58;CL:0000393,9.43e-07,61;CL:0000211,9.43e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;9.69e-08;43 | |ontology_enrichment_development_v019=CL:0000514;9.69e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;7.97e-10;2 | |ontology_enrichment_disease_v019=DOID:1909;7.97e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,7.98e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001637!3.49e-18!42;UBERON:0003509!3.49e-18!42;UBERON:0004572!3.49e-18!42;UBERON:0004573!2.10e-15!33;UBERON:0004571!2.10e-15!33;UBERON:0004872!2.83e-13!84;UBERON:0001981!4.89e-11!60;UBERON:0007500!4.89e-11!60;UBERON:0004537!4.89e-11!60;UBERON:0006965!4.89e-11!60;UBERON:0000415!2.75e-10!4;UBERON:0007240!2.75e-10!4;UBERON:0005742!2.75e-10!4;UBERON:0005734!2.75e-10!4;UBERON:0004664!2.75e-10!4;UBERON:0004663!2.75e-10!4;UBERON:0000947!4.50e-10!21;UBERON:0010191!4.50e-10!21;UBERON:0002385!8.18e-10!63;UBERON:0001015!8.18e-10!63;UBERON:0000383!8.18e-10!63;UBERON:0001134!2.96e-09!61;UBERON:0002036!2.96e-09!61;UBERON:0003082!2.96e-09!61;UBERON:0001135!4.93e-09!15;UBERON:0003914!5.26e-09!118;UBERON:0000055!6.56e-09!69;UBERON:0004237!8.59e-09!10;UBERON:0004695!8.59e-09!10;UBERON:0002111!8.59e-09!10;UBERON:0004178!8.59e-09!10;UBERON:0004535!1.62e-08!110;UBERON:0001009!4.10e-08!113;UBERON:0004290!1.87e-07!70;UBERON:0002049!3.79e-07!79;UBERON:0007798!3.79e-07!79 | |ontology_enrichment_uberon=UBERON:0001637!3.49e-18!42;UBERON:0003509!3.49e-18!42;UBERON:0004572!3.49e-18!42;UBERON:0004573!2.10e-15!33;UBERON:0004571!2.10e-15!33;UBERON:0004872!2.83e-13!84;UBERON:0001981!4.89e-11!60;UBERON:0007500!4.89e-11!60;UBERON:0004537!4.89e-11!60;UBERON:0006965!4.89e-11!60;UBERON:0000415!2.75e-10!4;UBERON:0007240!2.75e-10!4;UBERON:0005742!2.75e-10!4;UBERON:0005734!2.75e-10!4;UBERON:0004664!2.75e-10!4;UBERON:0004663!2.75e-10!4;UBERON:0000947!4.50e-10!21;UBERON:0010191!4.50e-10!21;UBERON:0002385!8.18e-10!63;UBERON:0001015!8.18e-10!63;UBERON:0000383!8.18e-10!63;UBERON:0001134!2.96e-09!61;UBERON:0002036!2.96e-09!61;UBERON:0003082!2.96e-09!61;UBERON:0001135!4.93e-09!15;UBERON:0003914!5.26e-09!118;UBERON:0000055!6.56e-09!69;UBERON:0004237!8.59e-09!10;UBERON:0004695!8.59e-09!10;UBERON:0002111!8.59e-09!10;UBERON:0004178!8.59e-09!10;UBERON:0004535!1.62e-08!110;UBERON:0001009!4.10e-08!113;UBERON:0004290!1.87e-07!70;UBERON:0002049!3.79e-07!79;UBERON:0007798!3.79e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.41e-26;10!UBERON:0004695;1.41e-26;10!UBERON:0002111;1.41e-26;10!UBERON:0004178;1.41e-26;10!UBERON:0000947;1.27e-19;21!UBERON:0010191;1.27e-19;21!UBERON:0001135;7.21e-18;15!UBERON:0004573;5.71e-11;33!UBERON:0004571;5.71e-11;33!UBERON:0001637;2.50e-10;42!UBERON:0003509;2.50e-10;42!UBERON:0004572;2.50e-10;42!UBERON:0000078;1.44e-09;2!UBERON:0002012;1.44e-09;2!UBERON:0008886;1.44e-09;2!UBERON:0002385;9.62e-09;31!UBERON:0001015;9.62e-09;31!UBERON:0000383;9.62e-09;31 | |ontology_enrichment_uberon_v019=UBERON:0004237;1.41e-26;10!UBERON:0004695;1.41e-26;10!UBERON:0002111;1.41e-26;10!UBERON:0004178;1.41e-26;10!UBERON:0000947;1.27e-19;21!UBERON:0010191;1.27e-19;21!UBERON:0001135;7.21e-18;15!UBERON:0004573;5.71e-11;33!UBERON:0004571;5.71e-11;33!UBERON:0001637;2.50e-10;42!UBERON:0003509;2.50e-10;42!UBERON:0004572;2.50e-10;42!UBERON:0000078;1.44e-09;2!UBERON:0002012;1.44e-09;2!UBERON:0008886;1.44e-09;2!UBERON:0002385;9.62e-09;31!UBERON:0001015;9.62e-09;31!UBERON:0000383;9.62e-09;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,1.72e-26,10;UBERON:0004695,1.72e-26,10;UBERON:0002111,1.72e-26,10;UBERON:0004178,1.72e-26,10;UBERON:0000947,1.68e-19,21;UBERON:0010191,1.68e-19,21;UBERON:0001135,8.23e-18,15;UBERON:0001637,7.83e-14,42;UBERON:0003509,7.83e-14,42;UBERON:0004572,7.83e-14,42;UBERON:0004573,1.88e-12,33;UBERON:0004571,1.88e-12,33;UBERON:0007500,8.53e-10,59;UBERON:0001981,8.53e-10,59;UBERON:0004537,8.53e-10,59;UBERON:0006965,8.53e-10,59;UBERON:0000078,1.71e-09,2;UBERON:0007497,1.71e-09,2;UBERON:0003643,1.71e-09,2;UBERON:0003504,1.71e-09,2;UBERON:0003469,1.71e-09,2;UBERON:0003496,1.71e-09,2;UBERON:0002012,1.71e-09,2;UBERON:0008886,1.71e-09,2;UBERON:0007303,1.71e-09,2;UBERON:0002061,1.71e-09,2;UBERON:0005432,1.71e-09,2;UBERON:0004363,1.71e-09,2;UBERON:0000055,1.81e-08,68;UBERON:0002049,2.37e-07,78;UBERON:0007798,2.37e-07,78;UBERON:0004872,6.82e-07,83;UBERON:0004145,9.64e-07,3 | |||
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|short_description=p5@AP3M2 | |short_description=p5@AP3M2 | ||
}} | }} |
Latest revision as of 07:13, 18 September 2015
Short description: | p5@AP3M2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AP3M2_5end |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | 119bp_to_ENST00000523249_5end |
EntrezGene: | AP3M2 |
HGNC: | 570 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.86e-27 | 10 |
melanoblast | 4.86e-27 | 10 |
aortic smooth muscle cell | 1.72e-26 | 10 |
light melanocyte | 2.94e-23 | 3 |
pigment cell | 1.92e-19 | 14 |
smooth muscle cell of the pulmonary artery | 1.22e-17 | 1 |
neurecto-epithelial cell | 1.01e-13 | 20 |
vascular associated smooth muscle cell | 7.34e-13 | 32 |
columnar/cuboidal epithelial cell | 3.01e-10 | 27 |
smooth muscle cell | 1.39e-09 | 43 |
smooth muscle myoblast | 1.39e-09 | 43 |
ecto-epithelial cell | 3.42e-08 | 34 |
muscle cell | 1.72e-07 | 55 |
muscle precursor cell | 4.20e-07 | 58 |
myoblast | 4.20e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.20e-07 | 58 |
electrically responsive cell | 9.43e-07 | 61 |
electrically active cell | 9.43e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
melanoma | 7.98e-10 | 2 |