FFCP PHASE1:Hg19::chr15:59908840..59908861,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9245 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=110bp_to_ENST00000560210_5end | |||
|cluster_id=chr15:59908840..59908861,+ | |||
|coexpression_cluster_id=C3501 | |||
|description=CAGE_peak_7_at_GCNT3_5end | |||
|id=chr15:59908840..59908861,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.90e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000167;3.45e-12;1!CL:0000164;3.45e-12;1!CL:0000502;3.45e-12;1!CL:0000172;3.45e-12;1!CL:0000173;3.45e-12;1!CL:0002149;6.05e-08;6!CL:0002255;6.05e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.27e-12,1;CL:0000164,3.27e-12,1;CL:0000502,3.27e-12,1;CL:0000172,3.27e-12,1;CL:0000173,3.27e-12,1;CL:0002351,3.27e-12,1;CL:0002149,5.55e-08,6;CL:0002255,5.55e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002351;3.45e-12;1!UBERON:0008801;3.45e-12;1!UBERON:0006298;5.05e-12;1!UBERON:0009143;1.25e-11;1!UBERON:0006595;5.20e-07;86 | |||
|ontology_enrichment_disease=DOID:4468!7.36e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:4430;3.45e-12;1!DOID:3001;6.05e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.27e-12,1;DOID:3001,5.55e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0006562!1.38e-10!11;UBERON:0000476!1.90e-10!3;UBERON:0000920!1.90e-10!3;UBERON:0007023!1.30e-08!115;UBERON:0001829!1.69e-08!2;UBERON:0003408!1.78e-08!10;UBERON:0001042!2.50e-08!10;UBERON:0009145!2.50e-08!10;UBERON:0003127!2.69e-08!2;UBERON:0004119!1.13e-07!169;UBERON:0000925!1.13e-07!169;UBERON:0006595!1.13e-07!169;UBERON:0003124!1.56e-07!7;UBERON:0008814!2.44e-07!15;UBERON:0001004!3.13e-07!72;UBERON:0004921!3.14e-07!129;UBERON:0004185!3.14e-07!129;UBERON:0000995!5.52e-07!21;UBERON:0000078!9.17e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.95e-22;2!UBERON:0003127;8.71e-22;2!UBERON:0001044;8.58e-17;6!UBERON:0003293;8.58e-17;6!UBERON:0003294;8.58e-17;6!UBERON:0010047;8.58e-17;6!UBERON:0003408;8.58e-17;6!UBERON:0000167;8.58e-17;6!UBERON:0001723;1.15e-14;3!UBERON:0001033;1.15e-14;3!UBERON:0000165;2.75e-13;28!UBERON:0001041;1.97e-12;14!UBERON:0002372;2.78e-12;1!UBERON:0001961;2.78e-12;1!UBERON:0001744;2.78e-12;1!UBERON:0001042;2.78e-12;1!UBERON:0001735;2.78e-12;1!UBERON:0001831;3.45e-12;1!UBERON:0001567;3.45e-12;1!UBERON:0001736;5.05e-12;1!UBERON:0000161;2.41e-09;19!UBERON:0000166;2.41e-09;19!UBERON:0003126;7.09e-07;7!UBERON:0001005;7.09e-07;7!UBERON:0004921;7.45e-07;33!UBERON:0006562;9.18e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.30e-22,2;UBERON:0003127,9.19e-22,2;UBERON:0000166,5.92e-17,22;UBERON:0001044,9.55e-17,6;UBERON:0003293,9.55e-17,6;UBERON:0003294,9.55e-17,6;UBERON:0010047,9.55e-17,6;UBERON:0000167,9.55e-17,6;UBERON:0001723,1.41e-14,3;UBERON:0001033,1.41e-14,3;UBERON:0010056,1.41e-14,3;UBERON:0001041,5.61e-13,87;UBERON:0000165,8.94e-13,29;UBERON:0000930,8.94e-13,29;UBERON:0002372,2.63e-12,1;UBERON:0001961,2.63e-12,1;UBERON:0001744,2.63e-12,1;UBERON:0001735,2.63e-12,1;UBERON:0001831,3.65e-12,1;UBERON:0001567,3.65e-12,1;UBERON:0008801,3.65e-12,1;UBERON:0001736,5.62e-12,1;UBERON:0006298,5.62e-12,1;UBERON:0001004,2.50e-10,74;UBERON:0003408,2.83e-10,10;UBERON:0000161,3.25e-10,36;UBERON:0001042,5.44e-10,10;UBERON:0009145,5.44e-10,10;UBERON:0006562,3.95e-09,11;UBERON:0004921,4.65e-09,118;UBERON:0000153,1.03e-07,62;UBERON:0007811,1.03e-07,62;UBERON:0000072,1.44e-07,47;UBERON:0001444,2.17e-07,49;UBERON:0001007,4.39e-07,145;UBERON:0001555,4.39e-07,145;UBERON:0007026,4.39e-07,145;UBERON:0003126,7.19e-07,7;UBERON:0001005,7.19e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.644566922551274,0,0,0,0,0.924184045252977,0,0,0.316654886678627,0,0,0,0,0,0,2.29388645740534,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0,0,1.61119057208048,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0.769502585037971,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.843992258112108,0.489698424477443,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,5.0332324117188,0,0,0,0,0,0,0,1.84279131327997,0,2.93774963014692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,6.030835435429,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31386509994472,0,0,0,1.8328549483524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20770274853339,0.0771741581079447,0.218559560503957,4.23285566725371,0,6.12759022464227,0,0,0,0,0,0,0,1.2498775702396,0,0,0,4.12856355064087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90438158372256,0,0.0645889098360061,0.186224142887574,0,0.190941474834495,0.404234377916439,1.08858373948481,1.36893320434112,7.47607788461922,3.22749924267044,1.33064142618405,0,0,0,0,0,0.733448665097199,0,0,0,0 | |||
|short_description=p7@GCNT3 | |||
}} |
Latest revision as of 09:11, 18 September 2015
Short description: | p7@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GCNT3_5end |
Coexpression cluster: | C3501_somatostatinoma_tonsil_throat_trachea_endometrioid_salivary_smallcell |
Association with transcript: | 110bp_to_ENST00000560210_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.27e-12 | 1 |
enteroendocrine cell | 3.27e-12 | 1 |
type D enteroendocrine cell | 3.27e-12 | 1 |
somatostatin secreting cell | 3.27e-12 | 1 |
pancreatic D cell | 3.27e-12 | 1 |
progenitor cell of endocrine pancreas | 3.27e-12 | 1 |
epithelial cell of uterus | 5.55e-08 | 6 |
stromal cell of endometrium | 5.55e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.27e-12 | 1 |
female reproductive endometrioid cancer | 5.55e-08 | 6 |