FFCP PHASE1:Hg19::chr1:165796782..165796803,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7371 | |EntrezGene=7371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12562 | |HGNC=12562 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZX2 | |UniProt=Q9BZX2 | ||
|association_with_transcript=14bp_to_ENST00000367879_5end | |association_with_transcript=14bp_to_ENST00000367879_5end | ||
|cluster_id=chr1:165796782..165796803,+ | |||
|coexpression_cluster_id=C2540 | |coexpression_cluster_id=C2540 | ||
|description=CAGE_peak_2_at_UCK2_5end | |description=CAGE_peak_2_at_UCK2_5end | ||
|id=chr1:165796782..165796803,+ | |id=chr1:165796782..165796803,+ | ||
|ontology_enrichment_celltype=CL:1000449;4.45e-07;15!CL:0002076;6.36e-07;42 | |ontology_enrichment_celltype=CL:0000066!2.55e-30!254;CL:0000548!2.08e-22!679;CL:0000004!2.08e-22!679;CL:0000255!2.08e-22!679;CL:0000012!4.51e-22!682;CL:0002321!1.40e-20!248;CL:0000220!7.41e-20!246;CL:0000003!1.49e-11!722;CL:0000144!2.82e-09!625;CL:0000076!7.83e-09!62;CL:0002076!1.08e-08!43;CL:0000063!1.42e-08!578;CL:0000055!2.35e-08!180;CL:0000223!2.11e-07!59;CL:0000222!7.01e-07!119 | ||
| | |ontology_enrichment_celltype_v019=CL:1000449;4.45e-07;15!CL:0002076;6.36e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000066,1.69e-30,253;CL:0002321,1.29e-20,250;CL:0002076,5.30e-09,42;CL:0000076,1.25e-08,63;CL:0000223,1.17e-07,58;CL:1000449,5.15e-07,15;CL:0000222,7.49e-07,121 | ||
|ontology_enrichment_uberon=UBERON:0000072;1.81e-08;37!UBERON:0006554;1.31e-07;30!UBERON:0001008;1.31e-07;30!UBERON:0000065;3.81e-07;44!UBERON:0006555;4.45e-07;15!UBERON:0004819;4.45e-07;15!UBERON:0001285;4.45e-07;15!UBERON:0007684;4.45e-07;15 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!4.04e-29!235;DOID:14566!1.38e-28!239;DOID:0050687!8.41e-17!143;DOID:305!4.30e-14!106;DOID:0050686!3.28e-12!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.16e-29,235;DOID:14566,1.09e-28,239;DOID:0050687,7.84e-17,143;DOID:305,4.07e-14,106;DOID:0050686,2.85e-12,137 | |||
|ontology_enrichment_uberon=UBERON:0003104!4.18e-14!238;UBERON:0009142!4.18e-14!238;UBERON:0004119!6.46e-09!169;UBERON:0000925!6.46e-09!169;UBERON:0006595!6.46e-09!169;UBERON:0001004!4.32e-08!72;UBERON:0000072!7.32e-08!46;UBERON:0005256!1.16e-07!143;UBERON:0002100!1.43e-07!216;UBERON:0008947!1.75e-07!38;UBERON:0003258!1.75e-07!38;UBERON:0000065!1.84e-07!53;UBERON:0000486!5.93e-07!82;UBERON:0006554!6.28e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;1.81e-08;37!UBERON:0006554;1.31e-07;30!UBERON:0001008;1.31e-07;30!UBERON:0000065;3.81e-07;44!UBERON:0006555;4.45e-07;15!UBERON:0004819;4.45e-07;15!UBERON:0001285;4.45e-07;15!UBERON:0007684;4.45e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.63e-08,160;UBERON:0000925,1.63e-08,160;UBERON:0006595,1.63e-08,160;UBERON:0002100,2.17e-08,199;UBERON:0000072,1.02e-07,47;UBERON:0001004,1.29e-07,74;UBERON:0008947,1.91e-07,38;UBERON:0003258,1.91e-07,38;UBERON:0000065,2.65e-07,54;UBERON:0004211,5.15e-07,15;UBERON:0009773,5.15e-07,15;UBERON:0001231,5.15e-07,15;UBERON:0001285,5.15e-07,15;UBERON:0007684,5.15e-07,15;UBERON:0004208,5.15e-07,15;UBERON:0003104,5.71e-07,160;UBERON:0009142,5.71e-07,160;UBERON:0000490,6.90e-07,148;UBERON:0000486,7.97e-07,83 | |||
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| ||
|short_description=p2@UCK2 | |short_description=p2@UCK2 | ||
}} | }} |
Latest revision as of 10:14, 18 September 2015
Short description: | p2@UCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UCK2_5end |
Coexpression cluster: | C2540_small_neuroblastoma_nonsmall_Urothelial_colon_anaplastic_Smooth |
Association with transcript: | 14bp_to_ENST00000367879_5end |
EntrezGene: | UCK2 |
HGNC: | 12562 |
UniProt: | Q9BZX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.69e-30 | 253 |
embryonic cell | 1.29e-20 | 250 |
endo-epithelial cell | 5.30e-09 | 42 |
squamous epithelial cell | 1.25e-08 | 63 |
endodermal cell | 1.17e-07 | 58 |
epithelial cell of nephron | 5.15e-07 | 15 |
mesodermal cell | 7.49e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.63e-08 | 160 |
endoderm | 1.63e-08 | 160 |
presumptive endoderm | 1.63e-08 | 160 |
trunk | 2.17e-08 | 199 |
segment of respiratory tract | 1.02e-07 | 47 |
respiratory system | 1.29e-07 | 74 |
respiratory primordium | 1.91e-07 | 38 |
endoderm of foregut | 1.91e-07 | 38 |
respiratory tract | 2.65e-07 | 54 |
nephron epithelium | 5.15e-07 | 15 |
renal tubule | 5.15e-07 | 15 |
nephron tubule | 5.15e-07 | 15 |
nephron | 5.15e-07 | 15 |
uriniferous tubule | 5.15e-07 | 15 |
nephrogenic mesenchyme | 5.15e-07 | 15 |
mesenchyme | 5.71e-07 | 160 |
entire embryonic mesenchyme | 5.71e-07 | 160 |
unilaminar epithelium | 6.90e-07 | 148 |
multilaminar epithelium | 7.97e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.16e-29 | 235 |
disease of cellular proliferation | 1.09e-28 | 239 |
cell type cancer | 7.84e-17 | 143 |
carcinoma | 4.07e-14 | 106 |
organ system cancer | 2.85e-12 | 137 |