FFCP PHASE1:Hg19::chr1:166958504..166958525,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84944 | |EntrezGene=84944 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25929 | |HGNC=25929 | ||
|TSSclassifier=strong | |||
|UniProt=Q96JY0 | |UniProt=Q96JY0 | ||
|association_with_transcript=0bp_to_ENST00000447624,NM_032858,uc001gdy.1,uc001gdz.1_5end | |association_with_transcript=0bp_to_ENST00000447624,NM_032858,uc001gdy.1,uc001gdz.1_5end | ||
|cluster_id=chr1:166958504..166958525,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_MAEL_5end | |description=CAGE_peak_1_at_MAEL_5end | ||
|id=chr1:166958504..166958525,+ | |id=chr1:166958504..166958525,+ | ||
|ontology_enrichment_celltype=CL:0002322!4.96e-11!5;CL:0000039!2.00e-08!7;CL:0000586!2.00e-08!7;CL:0002557!6.57e-07!1 | |ontology_enrichment_celltype=CL:0002322!4.96e-11!5;CL:0000039!2.00e-08!7;CL:0000586!2.00e-08!7;CL:0002557!6.57e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.41e-15;7!CL:0000586;5.41e-15;7!CL:0000322;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.81e-15,7;CL:0000586,5.81e-15,7;CL:0000322,1.41e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.10e-40;10!UBERON:0005564;7.10e-40;10!UBERON:0003124;9.79e-26;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;1.07e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.07e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0003135!8.28e-20!11;UBERON:0000473!2.75e-19!8;UBERON:0005631!2.09e-10!14;UBERON:0000158!2.09e-10!14;UBERON:0003101!1.30e-09!22;UBERON:0000079!1.30e-09!22;UBERON:0000305!4.13e-08!7;UBERON:0001301!1.63e-07!1;UBERON:0000991!3.47e-07!21;UBERON:0009196!3.47e-07!21;UBERON:0009117!3.47e-07!21;UBERON:0005564!3.47e-07!21;UBERON:0004871!3.76e-07!8;UBERON:0004176!7.59e-07!22 | |ontology_enrichment_uberon=UBERON:0003135!8.28e-20!11;UBERON:0000473!2.75e-19!8;UBERON:0005631!2.09e-10!14;UBERON:0000158!2.09e-10!14;UBERON:0003101!1.30e-09!22;UBERON:0000079!1.30e-09!22;UBERON:0000305!4.13e-08!7;UBERON:0001301!1.63e-07!1;UBERON:0000991!3.47e-07!21;UBERON:0009196!3.47e-07!21;UBERON:0009117!3.47e-07!21;UBERON:0005564!3.47e-07!21;UBERON:0004871!3.76e-07!8;UBERON:0004176!7.59e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.17e-49;8!UBERON:0003135;2.58e-36;11!UBERON:0000991;2.56e-19;21!UBERON:0003101;1.82e-18;22!UBERON:0000079;1.82e-18;22!UBERON:0004903;1.07e-13;2!UBERON:0002173;1.07e-13;2!UBERON:0002186;1.07e-13;2!UBERON:0004821;1.41e-09;3!UBERON:0007499;1.41e-09;3!UBERON:0003215;1.41e-09;3!UBERON:0010368;1.41e-09;3!UBERON:0009911;1.41e-09;3!UBERON:0002299;1.41e-09;3!UBERON:0006524;1.41e-09;3!UBERON:0008874;1.41e-09;3!UBERON:0002169;1.41e-09;3!UBERON:0004894;1.41e-09;3!UBERON:0009856;1.69e-07;4!UBERON:0001987;1.92e-07;4!UBERON:0002323;2.89e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.33e-49,8;UBERON:0003135,2.83e-36,11;UBERON:0000991,2.68e-19,21;UBERON:0009196,2.68e-19,21;UBERON:0009117,2.68e-19,21;UBERON:0005564,2.68e-19,21;UBERON:0004176,1.91e-18,22;UBERON:0003101,1.91e-18,22;UBERON:0000079,1.91e-18,22;UBERON:0004903,1.07e-13,2;UBERON:0002173,1.07e-13,2;UBERON:0002186,1.07e-13,2;UBERON:0003133,3.83e-13,48;UBERON:0005156,9.69e-11,59;UBERON:0000990,9.69e-11,59;UBERON:0004821,1.41e-09,3;UBERON:0003215,1.41e-09,3;UBERON:0010368,1.41e-09,3;UBERON:0009911,1.41e-09,3;UBERON:0002299,1.41e-09,3;UBERON:0006524,1.41e-09,3;UBERON:0008874,1.41e-09,3;UBERON:0002169,1.41e-09,3;UBERON:0004894,1.41e-09,3;UBERON:0002323,4.61e-09,46;UBERON:0004458,1.57e-08,49;UBERON:0003886,8.93e-08,54;UBERON:0001987,1.80e-07,4;UBERON:0004340,1.80e-07,4;UBERON:0002553,6.36e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,30.518124590967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8658139251779,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.5038423553451,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66107110487917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34574308406558,0.26721740526556,0,2.50707539292375,59.7893928941909,81.9970238277906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,30.518124590967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8658139251779,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.5038423553451,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66107110487917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34574308406558,0.26721740526556,0,2.50707539292375,59.7893928941909,81.9970238277906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p1@MAEL | |short_description=p1@MAEL | ||
}} | }} |
Latest revision as of 10:41, 18 September 2015
Short description: | p1@MAEL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAEL_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000447624, NM_032858, uc001gdy.1, uc001gdz.1_5end |
EntrezGene: | MAEL |
HGNC: | 25929 |
UniProt: | Q96JY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.81e-15 | 7 |
germ cell | 5.81e-15 | 7 |
pneumocyte | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.33e-49 | 8 |
male reproductive organ | 2.83e-36 | 11 |
gonad | 2.68e-19 | 21 |
indifferent external genitalia | 2.68e-19 | 21 |
indifferent gonad | 2.68e-19 | 21 |
gonad primordium | 2.68e-19 | 21 |
external genitalia | 1.91e-18 | 22 |
male organism | 1.91e-18 | 22 |
male reproductive system | 1.91e-18 | 22 |
bronchoalveolar duct junction | 1.07e-13 | 2 |
alveolar duct | 1.07e-13 | 2 |
bronchiole | 1.07e-13 | 2 |
reproductive organ | 3.83e-13 | 48 |
reproductive structure | 9.69e-11 | 59 |
reproductive system | 9.69e-11 | 59 |
pulmonary alveolus epithelium | 1.41e-09 | 3 |
alveolus | 1.41e-09 | 3 |
pulmonary lobule | 1.41e-09 | 3 |
lobule | 1.41e-09 | 3 |
alveolus of lung | 1.41e-09 | 3 |
alveolar system | 1.41e-09 | 3 |
pulmonary acinus | 1.41e-09 | 3 |
alveolar sac | 1.41e-09 | 3 |
alveolar wall | 1.41e-09 | 3 |
body cavity | 4.61e-09 | 46 |
body cavity or lining | 1.57e-08 | 49 |
body cavity precursor | 8.93e-08 | 54 |
placenta | 1.80e-07 | 4 |
allantois | 1.80e-07 | 4 |
anatomical cavity | 6.36e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.07e-13 | 2 |