FFCP PHASE1:Hg19::chr8:52773461..52773474,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115294 | |EntrezGene=115294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30483 | |HGNC=30483 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000519975_5end | |association_with_transcript=-17bp_to_ENST00000519975_5end | ||
|cluster_id=chr8:52773461..52773474,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_9_at_PCMTD1_5end | |description=CAGE_peak_9_at_PCMTD1_5end | ||
|id=chr8:52773461..52773474,- | |id=chr8:52773461..52773474,- | ||
|ontology_enrichment_celltype=CL:0000791!1.72e-07!18;CL:0000789!1.72e-07!18;CL:0002420!1.72e-07!18;CL:0002419!1.72e-07!18;CL:0000790!1.72e-07!18 | |ontology_enrichment_celltype=CL:0000791!1.72e-07!18;CL:0000789!1.72e-07!18;CL:0002420!1.72e-07!18;CL:0002419!1.72e-07!18;CL:0000790!1.72e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.51e-17;3!CL:0000094;3.78e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.39e-17,3;CL:0000094,3.67e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.40e-10!15;UBERON:0000179!7.40e-10!15;UBERON:0000463!7.40e-10!15;UBERON:0007023!7.49e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.74e-66;15!UBERON:0000179;1.74e-66;15!UBERON:0000463;1.74e-66;15!UBERON:0002390;4.15e-28;32!UBERON:0002193;1.25e-15;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.55e-66,15;UBERON:0000179,1.55e-66,15;UBERON:0000463,1.55e-66,15;UBERON:0002390,2.83e-09,98;UBERON:0003061,2.83e-09,98;UBERON:0004535,2.52e-08,109;UBERON:0002193,2.52e-08,108;UBERON:0001009,4.50e-08,112;UBERON:0007023,6.51e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0.515151135268373,0,0,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0,0.22465726229299,0,0,0,0,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0,0.444859689486181,0.802622484269139,1.04535523804977,0,0.383220493601921,0,0,0,0.651083453856419,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,0.201606743224732,1.06976078313403,0.724122019413995,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.336255431980582,0.394061520403854,0.646882724578552,0.128343036279748,0,0,0,0,0,3.74503511973591,2.99161459204025,0.414415513436035,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.82707210449155,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,0,0,0.184161977871793,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,2.53723804616085,3.0585488285695,11.3929437434833,5.47933083552915,4.52498500394814,1.94541993357815,3.7802200606668,12.6900028207083,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0.251932747854276,0.306806047506464,0,0,0,0.179021174675609,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.438770794307945,0,0,0.230850775511391,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.136203406111576,0.321506296930038,0,0,0.2249738915515,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.146552233678082,0,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0.732157589411779,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0.53168342911599,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0.705351887381368,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0.171488009437418,0.135939465953663,0.0657727735628491,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0.414432328326074,0,0,0,0,0,0,0.22910686854405,0,0,0.223710863595585,0,0,0,0.513314034281235,3.4794432940146,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0.187967835959707,0.257831551894309,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0.436350690340377,0,0,0.924351257262837,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0.227336094654718,0,0,0,0,0.23806443146374,0.129177819672012,0.31037357147929,0,0.12729431655633,0,0.435433495793923,0.684466602170562,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0.515151135268373,0,0,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0,0.22465726229299,0,0,0,0,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0,0.444859689486181,0.802622484269139,1.04535523804977,0,0.383220493601921,0,0,0,0.651083453856419,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,0.201606743224732,1.06976078313403,0.724122019413995,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.336255431980582,0.394061520403854,0.646882724578552,0.128343036279748,0,0,0,0,0,3.74503511973591,2.99161459204025,0.414415513436035,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.82707210449155,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,0,0,0.184161977871793,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,2.53723804616085,3.0585488285695,11.3929437434833,5.47933083552915,4.52498500394814,1.94541993357815,3.7802200606668,12.6900028207083,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0.251932747854276,0.306806047506464,0,0,0,0.179021174675609,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.438770794307945,0,0,0.230850775511391,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.136203406111576,0.321506296930038,0,0,0.2249738915515,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.146552233678082,0,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0.732157589411779,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0.53168342911599,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0.705351887381368,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0.171488009437418,0.135939465953663,0.0657727735628491,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0.414432328326074,0,0,0,0,0,0,0.22910686854405,0,0,0.223710863595585,0,0,0,0.513314034281235,3.4794432940146,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0.187967835959707,0.257831551894309,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0.436350690340377,0,0,0.924351257262837,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0.227336094654718,0,0,0,0,0.23806443146374,0.129177819672012,0.31037357147929,0,0.12729431655633,0,0.435433495793923,0.684466602170562,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@PCMTD1 | |short_description=p9@PCMTD1 | ||
}} | }} |
Latest revision as of 11:03, 18 September 2015
Short description: | p9@PCMTD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PCMTD1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -17bp_to_ENST00000519975_5end |
EntrezGene: | PCMTD1 |
HGNC: | 30483 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.39e-17 | 3 |
granulocyte | 3.67e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 1.55e-66 | 15 |
haemolymphatic fluid | 1.55e-66 | 15 |
organism substance | 1.55e-66 | 15 |
hematopoietic system | 2.83e-09 | 98 |
blood island | 2.83e-09 | 98 |
cardiovascular system | 2.52e-08 | 109 |
hemolymphoid system | 2.52e-08 | 108 |
circulatory system | 4.50e-08 | 112 |
adult organism | 6.51e-08 | 114 |