FFCP PHASE1:Hg19::chr4:74486090..74486106,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:74486090..74486106,-
|short_description=p2@RASSF6
|description=CAGE_peak_2_at_RASSF6_5end
|association_with_transcript=22bp_to_ENST00000395777_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=166824 | |EntrezGene=166824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20796 | |HGNC=20796 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000395777_5end | |||
|cluster_id=chr4:74486090..74486106,- | |||
|coexpression_cluster_id=C1523 | |||
|description=CAGE_peak_2_at_RASSF6_5end | |||
|id=chr4:74486090..74486106,- | |||
|ontology_enrichment_celltype=CL:0002076!7.96e-14!43;CL:0000223!2.53e-13!59;CL:0000066!2.34e-12!254;CL:0000945!4.03e-12!24;CL:0000826!4.03e-12!24;CL:0002251!1.09e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.06e-20;24!CL:0000236;1.84e-09;13!CL:0002621;6.18e-09;3!CL:0002076;1.69e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.96e-20,24;CL:0000826,3.96e-20,24;CL:0002076,8.35e-10,42;CL:0002621,4.76e-09,3;CL:0000542,1.30e-08,53;CL:0000051,1.30e-08,53;CL:0000236,1.40e-08,14;CL:0000838,1.62e-07,52;CL:0000223,2.52e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.54e-10!106;DOID:1749!2.59e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060058;8.18e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.27e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.56e-18!169;UBERON:0000925!9.56e-18!169;UBERON:0006595!9.56e-18!169;UBERON:0001007!7.38e-15!155;UBERON:0001555!7.38e-15!155;UBERON:0007026!7.38e-15!155;UBERON:0004921!5.98e-12!129;UBERON:0004185!5.98e-12!129;UBERON:0001004!6.72e-10!72;UBERON:0005911!1.81e-08!82;UBERON:0000077!2.15e-08!130;UBERON:0000161!9.60e-08!35;UBERON:0000974!1.15e-07!10;UBERON:0005409!1.81e-07!35;UBERON:0000344!5.17e-07!12;UBERON:0000464!1.00e-06!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.18e-09;3!UBERON:0002370;1.21e-07;2!UBERON:0005058;1.21e-07;2!UBERON:0009113;1.21e-07;2!UBERON:0006562;6.48e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.57e-11,160;UBERON:0000925,1.57e-11,160;UBERON:0006595,1.57e-11,160;UBERON:0001949,4.76e-09,3;UBERON:0001007,8.84e-09,145;UBERON:0001555,8.84e-09,145;UBERON:0007026,8.84e-09,145;UBERON:0005409,2.61e-07,25;UBERON:0001004,4.66e-07,74;UBERON:0004921,8.51e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06316195519468,1.80621296789881,1.25937250101887,0,0,0,0.919421224478927,0,0,15.1061041131588,11.5157078314811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,1.60158394814405,1.14950487990897,1.32208974556972,0,0.569212969109448,1.17447437874188,1.52909291250092,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.175669571386252,0.72038491523742,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.90922284413584,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.686271241194102,0.878002283269004,0,0.502644862058154,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.6798212819886,0.992425680696705,7.07512329352502,2.90633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,4.41114234667227,0.460404944679482,0,0,0,0.902399225814824,0.693138033939733,0,0,0.73886140225013,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0.256450125116389,0.656029291399411,0,1.13345112812495,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,3.8015530533025,1.72971060628596,3.31793052485919,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,0,1.08890984861323,1.03558180854457,0,0,0.443430153536676,2.98640420269047,0,0,0,0,0,0,0,0,0,0,1.96032172784825,7.24632382990303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,2.48655523978033,9.57344441846249,0,7.38508832766417,0,0,2.68531762013414,0,1.08507746200627,0,0,0,0,0,0,0,0.724999575434793,2.04828206913899,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0,0,0,0.0897576444097721,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.979396848954886,0.565412285735763,0,0.995261931078505,1.68069372556344,1.83309043480088,0,0,0,0.067401132980677,0,0,12.2244708774496,0.19566461893209,0,1.18375320854817,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0.569219092059585,0,1.04135843001079,0.293977192243133,0,0.873633341210151,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0,0.480952921509202,0.85381197895741,0,0,0,0.686379991447858,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,1.77169466726548,0,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0.670869375198532,2.36417121897595,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,0,0.106787412567695,0.628817220398664,0.414239055347196,0,9.88058159489721,18.8778527490389,2.55336503108073,0,0,0,0,8.95208348626335,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66851121451744,0.11796972334774,3.66857197043358,0.231051332300676,0,0,0,0,0,1.56302802246618,0.785720083444267,0,1.47856086217045,0,0,0,0,0,0,0,0,2.29972369751271,0,0,0.606965604236632,0.455324382702595,1.33053555243958,0.576169937778896,0,0,0,0,0.333694205676207,0.549451649953598,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0.828864656652147,0,0,0.430227358820278,0,0,1.27016115057279,0,0,0,2.01339777236026,1.3741032706134,0.609589624911347,0,0,0,0,5.38060765962843,16.9108158887163,0,1.24240690242856,0,12.0770274853339,2.54674721756217,1.74847648403166,13.1688842981226,0,0,0,0,0,0,0,0.0644578879735772,3.19811698959773,0,0,0.0802413666891683,4.3820183294791,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.227336094654718,0,0,0,0.426467963801962,0.714193294391221,18.6661949426058,23.153868432355,0,0.0636471582781649,1.21270313374932,0,0,2.02056159043763,1.07583308089015,0.332660356546013,1.54666210360852,0,0,0.179650404213174,0,0,0,0,1.61019034872821,0 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| ||
|short_description=p2@RASSF6 | |||
}} | }} |
Latest revision as of 13:41, 18 September 2015
Short description: | p2@RASSF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RASSF6_5end |
Coexpression cluster: | C1523_diffuse_small_lymphoma_thymus_Burkitt_lymphangiectasia_b |
Association with transcript: | 22bp_to_ENST00000395777_5end |
EntrezGene: | RASSF6 |
HGNC: | 20796 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.96e-20 | 24 |
pro-B cell | 3.96e-20 | 24 |
endo-epithelial cell | 8.35e-10 | 42 |
gingival epithelial cell | 4.76e-09 | 3 |
lymphocyte | 1.30e-08 | 53 |
common lymphoid progenitor | 1.30e-08 | 53 |
B cell | 1.40e-08 | 14 |
lymphoid lineage restricted progenitor cell | 1.62e-07 | 52 |
endodermal cell | 2.52e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.57e-11 | 160 |
endoderm | 1.57e-11 | 160 |
presumptive endoderm | 1.57e-11 | 160 |
gingival epithelium | 4.76e-09 | 3 |
digestive system | 8.84e-09 | 145 |
digestive tract | 8.84e-09 | 145 |
primitive gut | 8.84e-09 | 145 |
gastrointestinal system | 2.61e-07 | 25 |
respiratory system | 4.66e-07 | 74 |
subdivision of digestive tract | 8.51e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.27e-08 | 10 |