FFCP PHASE1:Hg19::chr5:74162119..74162144,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:74162119..74162144,- to FFCP PHASE1:Hg19::chr5:74162119..74162144,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26049 | |EntrezGene=26049 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29138 | |HGNC=29138 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000510609_5end | |||
|cluster_id=chr5:74162119..74162144,- | |||
|description=CAGE_peak_3_at_FAM169A_5end | |||
|id=chr5:74162119..74162144,- | |||
|ontology_enrichment_celltype=CL:0000838!2.82e-12!52;CL:0000542!9.91e-12!53;CL:0000051!9.91e-12!53;CL:0000791!8.18e-09!18;CL:0000789!8.18e-09!18;CL:0002420!8.18e-09!18;CL:0002419!8.18e-09!18;CL:0000790!8.18e-09!18;CL:0000084!1.24e-08!25;CL:0000827!1.24e-08!25;CL:0000625!1.70e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.06e-12;18!CL:0000789;9.06e-12;18!CL:0002419;9.06e-12;18!CL:0000625;1.49e-10;11!CL:0000084;3.18e-10;25!CL:0000542;2.15e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.79e-15,52;CL:0000542,7.72e-15,53;CL:0000051,7.72e-15,53;CL:0000791,2.52e-12,18;CL:0000789,2.52e-12,18;CL:0002420,2.52e-12,18;CL:0002419,2.52e-12,18;CL:0000790,2.52e-12,18;CL:0000625,1.10e-10,11;CL:0000084,1.26e-10,25;CL:0000827,1.26e-10,25 | |||
|ontology_enrichment_development_v019=CL:0000790;9.06e-12;18!UBERON:0006601;8.05e-11;82!CL:0000051;2.15e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.97e-27!94;UBERON:0001016!1.97e-27!94;UBERON:0001017!1.98e-27!82;UBERON:0001049!1.59e-26!57;UBERON:0005068!1.59e-26!57;UBERON:0006241!1.59e-26!57;UBERON:0007135!1.59e-26!57;UBERON:0005743!1.60e-26!86;UBERON:0000955!7.20e-26!69;UBERON:0006238!7.20e-26!69;UBERON:0002616!2.76e-23!59;UBERON:0002780!2.54e-22!41;UBERON:0001890!2.54e-22!41;UBERON:0006240!2.54e-22!41;UBERON:0003080!2.56e-21!42;UBERON:0000153!1.13e-19!129;UBERON:0007811!1.13e-19!129;UBERON:0000033!1.22e-18!123;UBERON:0007023!2.45e-18!115;UBERON:0002020!4.82e-18!34;UBERON:0003528!4.82e-18!34;UBERON:0001893!7.58e-18!34;UBERON:0002346!1.40e-17!90;UBERON:0003075!1.51e-17!86;UBERON:0007284!1.51e-17!86;UBERON:0002791!4.28e-17!33;UBERON:0001869!5.61e-17!32;UBERON:0000924!1.67e-16!173;UBERON:0006601!1.67e-16!173;UBERON:0004121!2.81e-16!169;UBERON:0003056!1.75e-15!61;UBERON:0000956!6.10e-13!25;UBERON:0000203!6.10e-13!25;UBERON:0002619!1.10e-12!22;UBERON:0001950!1.88e-11!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.33e-27;53!UBERON:0002616;5.33e-27;53!UBERON:0001893;3.58e-26;34!UBERON:0003528;4.93e-26;34!UBERON:0002020;4.93e-26;34!UBERON:0002619;5.04e-26;22!UBERON:0002780;5.81e-26;41!UBERON:0001890;5.81e-26;41!UBERON:0001869;2.88e-25;32!UBERON:0002791;4.93e-25;32!UBERON:0001950;1.69e-23;20!UBERON:0000956;3.09e-22;25!UBERON:0000203;3.09e-22;25!UBERON:0000955;2.93e-16;68!UBERON:0001017;1.17e-14;75!UBERON:0001016;2.22e-13;83!UBERON:0004732;3.31e-11;13!UBERON:0000200;3.06e-10;6!UBERON:0002420;3.46e-10;9!UBERON:0000125;3.46e-10;9!UBERON:0007245;3.46e-10;9!UBERON:0002308;3.46e-10;9!UBERON:0010009;3.46e-10;9!UBERON:0010011;3.46e-10;9!UBERON:0000454;3.46e-10;9!UBERON:0004733;9.49e-10;12!UBERON:0002028;9.49e-10;12!UBERON:0002298;1.16e-09;6!UBERON:0000349;1.79e-08;5!UBERON:0001894;4.40e-08;7!UBERON:0001872;9.93e-08;5!UBERON:0002021;1.50e-07;5!UBERON:0009663;2.01e-07;7!UBERON:0007023;2.30e-07;114!UBERON:0003296;4.38e-07;4!UBERON:0010133;4.38e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.75e-48,56;UBERON:0005068,1.75e-48,56;UBERON:0006241,1.75e-48,56;UBERON:0007135,1.75e-48,56;UBERON:0000073,7.78e-47,53;UBERON:0002616,7.78e-47,53;UBERON:0000955,2.66e-38,68;UBERON:0006238,2.66e-38,68;UBERON:0002780,3.55e-38,41;UBERON:0001890,3.55e-38,41;UBERON:0003080,3.55e-38,41;UBERON:0006240,3.55e-38,41;UBERON:0001017,1.95e-36,81;UBERON:0001016,5.07e-33,89;UBERON:0003075,1.26e-31,82;UBERON:0007284,1.26e-31,82;UBERON:0003528,2.07e-31,34;UBERON:0002020,2.07e-31,34;UBERON:0001893,5.02e-31,34;UBERON:0002346,1.85e-29,86;UBERON:0001869,3.33e-29,32;UBERON:0002791,1.28e-28,32;UBERON:0010371,7.87e-28,104;UBERON:0002619,2.30e-26,22;UBERON:0003056,2.83e-25,61;UBERON:0001950,9.27e-24,20;UBERON:0000956,1.57e-22,25;UBERON:0000203,1.57e-22,25;UBERON:0007023,2.91e-22,114;UBERON:0010314,3.76e-15,132;UBERON:0004121,6.52e-15,171;UBERON:0000924,6.52e-15,171;UBERON:0006601,6.52e-15,171;UBERON:0011216,1.57e-12,223;UBERON:0003076,2.94e-11,15;UBERON:0003057,2.94e-11,15;UBERON:0004732,3.62e-11,13;UBERON:0002420,2.05e-10,9;UBERON:0007245,2.05e-10,9;UBERON:0010009,2.05e-10,9;UBERON:0010011,2.05e-10,9;UBERON:0000454,2.05e-10,9;UBERON:0000125,2.60e-10,9;UBERON:0002308,2.60e-10,9;UBERON:0000200,2.86e-10,6;UBERON:0004733,1.02e-09,12;UBERON:0002028,1.02e-09,12;UBERON:0007277,1.02e-09,12;UBERON:0002298,1.58e-09,6;UBERON:0000025,2.32e-09,192;UBERON:0000349,9.38e-09,5;UBERON:0001894,1.65e-08,7;UBERON:0006222,1.65e-08,7;UBERON:0001872,9.29e-08,5;UBERON:0002021,1.27e-07,5;UBERON:0009663,1.52e-07,7;UBERON:0003296,1.88e-07,4;UBERON:0010133,1.88e-07,4;UBERON:0000369,3.84e-07,4;UBERON:0002435,3.84e-07,4;UBERON:0000204,3.84e-07,4;UBERON:0010082,3.84e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.547497700291537,0.502170558379211,0.534893840235659,1.23150884174919,1.81034797021462,0.393364276848904,4.60595277716655,0.77408061658038,0,0.30120591877825,0.739508020333575,0,0,0.587200878669695,0.553995408531877,0.802177789880567,1.51907609501096,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0,0,0.426730222566507,0.400395987036012,0.574752439954483,1.32208974556972,0,3.41527781465669,1.76171156811282,3.44045905312706,1.32171328579026,3.36305137788922,0,0.393419540227666,1.57204305099666,1.85041349099558,0,1.95553359980154,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0,0.640456598628376,0,0,0,0.289803085735052,2.07601188426885,0.535081656179426,1.04535523804977,0.113309342697566,1.53288197440768,0.34362744548263,0.506039384039006,0.318565414324097,1.30216690771284,1.90090408889675,1.50575119077773,1.66382594500744,2.49861453104692,1.18388626022008,0.821127996921047,5.84659555351724,5.08136371988664,4.19990771260117,0,0,0,0,0,0,0,0,0.756278537312543,0.221729397462564,0.43917392846563,0.916853528483988,0,0.741568885568859,0,0,0,1.43094374583205,1.71598473234038,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421352420106746,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,1.36373060295417,0.573609190778008,0.975789649036763,1.98794652482228,0.232387885739037,0.829288440122964,1.51392510525377,0.72995471815166,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0.653638332277218,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0.368965315629341,0,0.439001141634502,1.1240175325762,0.301586917234893,1.01847289674383,0,0,0,0.811512834825538,0.352226082707465,0,0,0,0,0,0,0,0,0,0.671928512795438,0.708875486211932,1.88072897675981,1.16253575405585,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74358444383662,5.60631694634745,4.74869234235069,0.76228387266739,0,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0.630809660135739,0.234282829985426,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.362578348774867,1.40354529212299,0.736647911487171,0,0,0,0.451199612907412,0.231046011313244,0,0,0.211103257785751,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.824125183365091,0.495056999523528,0.574265537996172,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0.495854746082934,0.384380134730212,0.510450849978337,1.2138933702666,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.288666338176536,0,1.08890984861323,0,0,0,0,1.37834040124176,1.01489521846434,2.29391162142713,0,0.238231775457789,0.411362273086194,0.648473311192717,0.540031437238115,0,9.82781454372753,0.962479855263359,0.490080431962063,0,0,0.640276590135727,1.75368900001705,0,0.383010740264733,0.635020748171649,0,0,0,0,2.50634477090067,0,0,0,0.425846237690326,0,0,0,0,0,0.556812347790485,0,0,0,0,1.49712432326576,0,0,0,2.27308917445131,0,0.296964680832639,0,2.98244294329889,2.53204949538923,0,0.494411622680279,4.01138275443188,0,0.276283915531148,0,0.102268682502155,1.84627208191604,0,1.3480252672099,0.358042349351218,0,0.295930216910801,0,0,0.969332746095218,2.22643435588443,1.99613798001194,0.260427761085233,0,0,0,0,0.236387681767936,0,0,1.21537496453305,1.77148277162768,1.68835014075571,1.52581736317083,2.43274371848694,3.54657142744257,1.31631238292384,0,1.67308493134324,0.0769502585037971,0.91153644677601,0.69169171316418,1.34636466614658,0.217294743844016,0,0.183195186803725,0,1.02193298195737,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0.424059214301822,0.216388639742091,0,0.0884575645033392,0.611030144933625,0,0.247127877893006,0.104421949505455,1.01101699471016,0,1.63985112007737,0.729819156862664,0.782658475728359,0.485560759068186,0.394584402849391,0,0,0.252746318513952,4.66002600184927,1.24425829676697,0,0,0.313932918407225,0,0,0,0.694238953340524,0.391969589657511,0.783532859223623,1.39781334593624,0.687944129886466,0,0,0,0.0969890164884194,0.0882561266915003,1.35588444468319,0.137041924646751,0.397429223405979,3.16553979779394,0.782205530939212,0.240476460754601,0.213452994739353,0.999048047910651,1.29681375438695,8.59024471244367,0.514784993585894,0,0.49701014226173,0.235694034616795,0.543616824294456,0.523014231561666,0.101998217636322,0.866851769704557,0.600420288709789,1.23214841002794,0,0.859530882839914,0.262887354279314,0,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,1.1649594952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| ||
|short_description=p3@FAM169A | |||
}} | }} |
Latest revision as of 16:56, 18 September 2015
Short description: | p3@FAM169A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM169A_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000510609_5end |
EntrezGene: | FAM169A |
HGNC: | 29138 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.79e-15 | 52 |
lymphocyte | 7.72e-15 | 53 |
common lymphoid progenitor | 7.72e-15 | 53 |
mature alpha-beta T cell | 2.52e-12 | 18 |
alpha-beta T cell | 2.52e-12 | 18 |
immature T cell | 2.52e-12 | 18 |
mature T cell | 2.52e-12 | 18 |
immature alpha-beta T cell | 2.52e-12 | 18 |
CD8-positive, alpha-beta T cell | 1.10e-10 | 11 |
T cell | 1.26e-10 | 25 |
pro-T cell | 1.26e-10 | 25 |