FFCP PHASE1:Hg19::chr5:75379172..75379184,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22987 | |EntrezGene=22987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30670 | |HGNC=30670 | ||
|TSSclassifier=strong | |||
|UniProt=Q496J9 | |UniProt=Q496J9 | ||
|association_with_transcript=-54bp_to_ENST00000322285_5end | |association_with_transcript=-54bp_to_ENST00000322285_5end | ||
|cluster_id=chr5:75379172..75379184,+ | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_3_at_SV2C_5end | |description=CAGE_peak_3_at_SV2C_5end | ||
|id=chr5:75379172..75379184,+ | |id=chr5:75379172..75379184,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;4.47e-16;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.20e-15;82!UBERON:0010122;9.73e-12;2!UBERON:0006241;1.39e-07;3!UBERON:0003057;1.39e-07;3 | |||
|ontology_enrichment_disease=DOID:3095!5.62e-07!22;DOID:2994!5.62e-07!22;DOID:169!7.51e-07!6 | |ontology_enrichment_disease=DOID:3095!5.62e-07!22;DOID:2994!5.62e-07!22;DOID:169!7.51e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:169;2.02e-13;6!DOID:171;4.34e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.46e-13,6;DOID:171,3.60e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.76e-51!57;UBERON:0005068!2.76e-51!57;UBERON:0006241!2.76e-51!57;UBERON:0007135!2.76e-51!57;UBERON:0000073!3.10e-47!94;UBERON:0001016!3.10e-47!94;UBERON:0002780!1.59e-45!41;UBERON:0001890!1.59e-45!41;UBERON:0006240!1.59e-45!41;UBERON:0001017!2.93e-44!82;UBERON:0003080!3.07e-44!42;UBERON:0000955!3.57e-44!69;UBERON:0006238!3.57e-44!69;UBERON:0005743!1.01e-43!86;UBERON:0002616!2.13e-43!59;UBERON:0002020!3.06e-42!34;UBERON:0003528!3.06e-42!34;UBERON:0001893!7.22e-42!34;UBERON:0002791!8.63e-40!33;UBERON:0001869!1.48e-38!32;UBERON:0003075!9.53e-38!86;UBERON:0007284!9.53e-38!86;UBERON:0002346!1.64e-37!90;UBERON:0007023!1.26e-35!115;UBERON:0003056!8.92e-32!61;UBERON:0002619!4.26e-28!22;UBERON:0001950!1.50e-24!20;UBERON:0000956!3.04e-24!25;UBERON:0000203!3.04e-24!25;UBERON:0000924!5.58e-24!173;UBERON:0006601!5.58e-24!173;UBERON:0004121!1.18e-23!169;UBERON:0000033!2.77e-22!123;UBERON:0002308!3.49e-21!9;UBERON:0000125!3.49e-21!9;UBERON:0000153!1.05e-20!129;UBERON:0007811!1.05e-20!129;UBERON:0009663!8.90e-17!7;UBERON:0000200!7.00e-14!6;UBERON:0002420!9.48e-13!9;UBERON:0007245!9.48e-13!9;UBERON:0010009!9.48e-13!9;UBERON:0010011!9.48e-13!9;UBERON:0000454!9.48e-13!9;UBERON:0000369!5.38e-11!4;UBERON:0002435!5.38e-11!4;UBERON:0000204!5.38e-11!4;UBERON:0010082!5.38e-11!4;UBERON:0000025!3.51e-10!194;UBERON:0002298!6.07e-10!8;UBERON:0003076!8.57e-09!15;UBERON:0003057!8.57e-09!15;UBERON:0005383!1.06e-08!3;UBERON:0005382!1.06e-08!3;UBERON:0001872!2.86e-08!5;UBERON:0000013!2.97e-08!5;UBERON:0002410!2.97e-08!5;UBERON:0000988!4.64e-08!3;UBERON:0006331!1.33e-07!3;UBERON:0002021!1.58e-07!5;UBERON:0002771!2.32e-07!3;UBERON:0001871!7.80e-07!7 | |ontology_enrichment_uberon=UBERON:0001049!2.76e-51!57;UBERON:0005068!2.76e-51!57;UBERON:0006241!2.76e-51!57;UBERON:0007135!2.76e-51!57;UBERON:0000073!3.10e-47!94;UBERON:0001016!3.10e-47!94;UBERON:0002780!1.59e-45!41;UBERON:0001890!1.59e-45!41;UBERON:0006240!1.59e-45!41;UBERON:0001017!2.93e-44!82;UBERON:0003080!3.07e-44!42;UBERON:0000955!3.57e-44!69;UBERON:0006238!3.57e-44!69;UBERON:0005743!1.01e-43!86;UBERON:0002616!2.13e-43!59;UBERON:0002020!3.06e-42!34;UBERON:0003528!3.06e-42!34;UBERON:0001893!7.22e-42!34;UBERON:0002791!8.63e-40!33;UBERON:0001869!1.48e-38!32;UBERON:0003075!9.53e-38!86;UBERON:0007284!9.53e-38!86;UBERON:0002346!1.64e-37!90;UBERON:0007023!1.26e-35!115;UBERON:0003056!8.92e-32!61;UBERON:0002619!4.26e-28!22;UBERON:0001950!1.50e-24!20;UBERON:0000956!3.04e-24!25;UBERON:0000203!3.04e-24!25;UBERON:0000924!5.58e-24!173;UBERON:0006601!5.58e-24!173;UBERON:0004121!1.18e-23!169;UBERON:0000033!2.77e-22!123;UBERON:0002308!3.49e-21!9;UBERON:0000125!3.49e-21!9;UBERON:0000153!1.05e-20!129;UBERON:0007811!1.05e-20!129;UBERON:0009663!8.90e-17!7;UBERON:0000200!7.00e-14!6;UBERON:0002420!9.48e-13!9;UBERON:0007245!9.48e-13!9;UBERON:0010009!9.48e-13!9;UBERON:0010011!9.48e-13!9;UBERON:0000454!9.48e-13!9;UBERON:0000369!5.38e-11!4;UBERON:0002435!5.38e-11!4;UBERON:0000204!5.38e-11!4;UBERON:0010082!5.38e-11!4;UBERON:0000025!3.51e-10!194;UBERON:0002298!6.07e-10!8;UBERON:0003076!8.57e-09!15;UBERON:0003057!8.57e-09!15;UBERON:0005383!1.06e-08!3;UBERON:0005382!1.06e-08!3;UBERON:0001872!2.86e-08!5;UBERON:0000013!2.97e-08!5;UBERON:0002410!2.97e-08!5;UBERON:0000988!4.64e-08!3;UBERON:0006331!1.33e-07!3;UBERON:0002021!1.58e-07!5;UBERON:0002771!2.32e-07!3;UBERON:0001871!7.80e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.70e-41;32!UBERON:0003528;8.66e-40;34!UBERON:0002020;8.66e-40;34!UBERON:0001893;3.54e-38;34!UBERON:0002791;1.07e-37;32!UBERON:0000125;1.35e-35;9!UBERON:0002308;1.35e-35;9!UBERON:0002780;1.52e-31;41!UBERON:0001890;1.52e-31;41!UBERON:0000073;1.22e-26;53!UBERON:0002616;1.22e-26;53!UBERON:0009663;2.17e-26;7!UBERON:0001950;5.30e-26;20!UBERON:0001017;4.96e-24;75!UBERON:0002619;1.49e-23;22!UBERON:0000955;4.18e-23;68!UBERON:0000369;1.26e-21;4!UBERON:0002435;1.26e-21;4!UBERON:0000204;1.26e-21;4!UBERON:0000956;1.38e-20;25!UBERON:0000203;1.38e-20;25!UBERON:0002420;2.14e-20;9!UBERON:0007245;2.14e-20;9!UBERON:0010009;2.14e-20;9!UBERON:0010011;2.14e-20;9!UBERON:0000454;2.14e-20;9!UBERON:0001016;2.42e-20;83!UBERON:0005383;9.57e-17;3!UBERON:0005382;9.57e-17;3!UBERON:0001872;1.95e-16;5!UBERON:0000013;4.47e-16;5!UBERON:0002410;4.47e-16;5!UBERON:0000988;1.99e-15;3!UBERON:0002298;1.56e-13;6!UBERON:0000200;2.02e-13;6!UBERON:0001873;9.73e-12;2!UBERON:0002148;4.51e-11;2!UBERON:0006331;4.51e-11;2!UBERON:0009662;4.51e-11;2!UBERON:0001875;4.99e-11;2!UBERON:0006514;4.99e-11;2!UBERON:0002021;2.90e-09;5!UBERON:0000010;5.57e-09;8!UBERON:0007023;1.11e-08;114!UBERON:0011216;4.86e-08;132!UBERON:0002240;1.39e-07;3!UBERON:0005174;1.39e-07;3!UBERON:0001137;1.39e-07;3!UBERON:0004733;8.39e-07;12!UBERON:0002028;8.39e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.20e-53,56;UBERON:0005068,3.20e-53,56;UBERON:0006241,3.20e-53,56;UBERON:0007135,3.20e-53,56;UBERON:0001016,6.21e-52,89;UBERON:0000073,1.42e-47,53;UBERON:0002616,1.42e-47,53;UBERON:0003528,9.14e-47,34;UBERON:0002020,9.14e-47,34;UBERON:0001869,1.80e-44,32;UBERON:0001017,6.49e-44,81;UBERON:0002780,9.25e-43,41;UBERON:0001890,9.25e-43,41;UBERON:0003080,9.25e-43,41;UBERON:0006240,9.25e-43,41;UBERON:0000955,4.72e-42,68;UBERON:0006238,4.72e-42,68;UBERON:0001893,1.08e-41,34;UBERON:0002791,1.94e-39,32;UBERON:0000125,1.30e-35,9;UBERON:0002308,1.30e-35,9;UBERON:0003075,1.03e-34,82;UBERON:0007284,1.03e-34,82;UBERON:0002346,7.57e-33,86;UBERON:0003056,1.79e-27,61;UBERON:0009663,2.59e-26,7;UBERON:0010371,3.28e-26,104;UBERON:0007023,1.25e-25,114;UBERON:0001950,1.31e-25,20;UBERON:0004121,3.28e-24,171;UBERON:0000924,3.28e-24,171;UBERON:0006601,3.28e-24,171;UBERON:0002619,3.38e-23,22;UBERON:0000369,1.26e-21,4;UBERON:0002435,1.26e-21,4;UBERON:0000204,1.26e-21,4;UBERON:0010082,1.26e-21,4;UBERON:0011216,3.21e-21,223;UBERON:0002420,2.46e-20,9;UBERON:0007245,2.46e-20,9;UBERON:0010009,2.46e-20,9;UBERON:0010011,2.46e-20,9;UBERON:0000454,2.46e-20,9;UBERON:0000956,2.83e-20,25;UBERON:0000203,2.83e-20,25;UBERON:0010314,1.85e-19,132;UBERON:0005383,9.60e-17,3;UBERON:0005382,9.60e-17,3;UBERON:0001872,2.80e-16,5;UBERON:0000013,3.02e-16,5;UBERON:0002410,3.02e-16,5;UBERON:0000988,2.20e-15,3;UBERON:0002298,1.67e-13,6;UBERON:0000200,2.54e-13,6;UBERON:0000025,8.92e-13,192;UBERON:0001873,9.75e-12,2;UBERON:0010122,9.75e-12,2;UBERON:0003076,1.74e-11,15;UBERON:0003057,1.74e-11,15;UBERON:0002148,3.51e-11,2;UBERON:0006331,3.51e-11,2;UBERON:0009662,3.51e-11,2;UBERON:0001875,6.11e-11,2;UBERON:0006514,6.11e-11,2;UBERON:0002021,3.55e-09,5;UBERON:0000010,4.52e-09,8;UBERON:0004111,4.64e-09,240;UBERON:0002240,1.03e-07,3;UBERON:0005174,1.03e-07,3;UBERON:0001137,1.03e-07,3;UBERON:0004733,8.66e-07,12;UBERON:0002028,8.66e-07,12;UBERON:0007277,8.66e-07,12 | |||
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|short_description=p3@SV2C | |short_description=p3@SV2C | ||
}} | }} |
Latest revision as of 17:46, 18 September 2015
Short description: | p3@SV2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SV2C_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -54bp_to_ENST00000322285_5end |
EntrezGene: | SV2C |
HGNC: | 30670 |
UniProt: | Q496J9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.46e-13 | 6 |
neuroectodermal tumor | 3.60e-08 | 10 |