FFCP PHASE1:Hg19::chr11:62138569..62138596,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42382 | |HGNC=42382 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENST00000526625_5end | |association_with_transcript=-21bp_to_ENST00000526625_5end | ||
|cluster_id=chr11:62138569..62138596,+ | |||
|description=CAGE_peak_1_at_RCC2P6_5end | |description=CAGE_peak_1_at_RCC2P6_5end | ||
|id=chr11:62138569..62138596,+ | |id=chr11:62138569..62138596,+ | ||
|ontology_enrichment_celltype=CL:0000785;8.60e-12;1!CL:0000819;8.60e-12;1!CL:0002322;6.69e-09;5 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000785;8.60e-12;1!CL:0000819;8.60e-12;1!CL:0002322;6.69e-09;5 | ||
|ontology_enrichment_disease=DOID:0060073;8.60e-12;1!DOID:8675;8.60e-12;1!DOID:3371;1.01e-11;1!DOID:4549;1.01e-11;1!DOID:5861;1.01e-11;1!DOID:6496;1.01e-11;1!DOID:0060058;1.14e-09;10 | |ontology_enrichment_celltype_v019_2=CL:0000819,8.62e-12,1;CL:0002322,8.17e-09,5;CL:0000039,9.65e-07,7;CL:0000586,9.65e-07,7 | ||
|ontology_enrichment_uberon=UBERON:0000941;2.67e-11;1!UBERON:0001785;2.67e-11;1!UBERON:0002464;2.67e-11;1!UBERON:0004904;2.67e-11;1!UBERON:0001021;2.67e-11;1 | |ontology_enrichment_development_v019=UBERON:0005425;2.67e-11;1 | ||
|ontology_enrichment_disease=DOID:162!1.06e-17!235;DOID:14566!5.46e-17!239;DOID:2531!2.75e-12!51;DOID:0060083!2.75e-12!51;DOID:0050686!1.93e-10!137;DOID:0050687!1.38e-09!143;DOID:1240!4.70e-08!39;DOID:305!8.40e-08!106;DOID:3095!1.45e-07!22;DOID:2994!1.45e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:0060073;8.60e-12;1!DOID:8675;8.60e-12;1!DOID:3371;1.01e-11;1!DOID:4549;1.01e-11;1!DOID:5861;1.01e-11;1!DOID:6496;1.01e-11;1!DOID:0060058;1.14e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,8.62e-12,1;DOID:8675,8.62e-12,1;DOID:3371,1.06e-11,1;DOID:4549,1.06e-11,1;DOID:5861,1.06e-11,1;DOID:6496,1.06e-11,1;DOID:0060058,7.76e-10,10;DOID:2531,9.62e-07,51;DOID:0060083,9.62e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.67e-11;1!UBERON:0001785;2.67e-11;1!UBERON:0002464;2.67e-11;1!UBERON:0004904;2.67e-11;1!UBERON:0001021;2.67e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.78e-11,1;UBERON:0001785,1.78e-11,1;UBERON:0002464,1.78e-11,1;UBERON:0004904,1.78e-11,1;UBERON:0001021,1.78e-11,1;UBERON:0003902,1.78e-11,1;UBERON:0005425,1.78e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0.626909442956176,0,0,0,0,0.410502947249729,0.0787107813136792,0,0,0.154816123316076,0,0.30120591877825,0,1.54934401160603,1.9903692548239,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,1.29096936716765,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,1.27867425159808,0.329851300186716,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0.130979075497713,0,0.370784442784429,0,0,0.398873881556595,0.238490624305342,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0,1.18800285728205,0,0,0,0.336672227908132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0.286804595389004,1.21973706129595,0.132529768321485,0.232387885739037,0.310983165046111,1.26160425437814,0.72995471815166,0,0,0,0,0,0.236613600079688,0.505754070234305,0,0.110293972732394,0,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0.245976877086227,0.343135620597051,0.109750285408626,1.1240175325762,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0.492663237895943,0.44024217006613,0.414656231081544,0,0.25248486685276,0.380987365753014,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,1.00337954770971,0,0,0,0.219259876645935,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0.557409525377156,0.432807638929335,0.497992903438899,0.159426272728822,0.199579371432817,0.191505370132367,0.423347165447766,0,0,0,0.156679895773023,0,0.50787533340481,0.1605880751037,0.201799707191048,1.70338495076131,0,0,0,0,0,0.278406173895242,1.23087398947712,0.270455678475983,0,1.4098700508785,0.18714054040822,0.146508179271894,0.121360521749513,0.222886768554957,0,0,0.296964680832639,0,0.994147647766298,0,0,0,0,0,0.276283915531148,0.251932747854276,0.306806047506464,0.492339221844278,0,0,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,1.01701460117107,0.709163045303809,0,0,0.173624994933292,0,0,0,0,0,0,0.21787692703798,0,0,0,0.46112780877612,0.0897576444097721,0.325942115766024,0,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0.19606253431774,0.335643173951685,0.189753732724185,0.317873157960757,0,0,0,0,0,0,0,0.593042257361244,0.617819694732514,0.626531697032732,0,0,0,3.46664099509765,0.19566461893209,0.485560759068186,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,2.02989091390451,0,0,0.397429223405979,0.189932387867636,0.391102765469606,0,0,0.39961921916426,0.864542502924636,0.229073192331831,0,0,0,0.471388069233591,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0.429226048136571,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0.338693328263138,0,0.136203406111576,0.964518890790115,0.687697182986169,1.24632101408756,0.2249738915515,0,0,0,0,0.104909176269996,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0.988058159489721,0.730755590285376,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0.573409195690071,0,0,0,0.124980407962107,0,0.285465333544967,0,0.468334905806882,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0.464033759878494,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0,0.688859918643263,0,0.184105950251841,0,0,0,0.107824811396682,0.471797825567689,0,0.33946505990805,0.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| ||
|short_description=p1@RCC2P6 | |short_description=p1@RCC2P6 | ||
}} | }} |
Latest revision as of 18:50, 18 September 2015
Short description: | p1@RCC2P6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RCC2P6_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000526625_5end |
EntrezGene: | NA |
HGNC: | 42382 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 8.62e-12 | 1 |
embryonic stem cell | 8.17e-09 | 5 |
germ line cell | 9.65e-07 | 7 |
germ cell | 9.65e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.78e-11 | 1 |
cranial nerve | 1.78e-11 | 1 |
nerve trunk | 1.78e-11 | 1 |
nerve connecting eye with brain | 1.78e-11 | 1 |
nerve | 1.78e-11 | 1 |
retinal neural layer | 1.78e-11 | 1 |
presumptive neural retina | 1.78e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 8.62e-12 | 1 |
lymphosarcoma | 8.62e-12 | 1 |
chondrosarcoma | 1.06e-11 | 1 |
extraosseous chondrosarcoma | 1.06e-11 | 1 |
myxoid chondrosarcoma | 1.06e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 1.06e-11 | 1 |
lymphoma | 7.76e-10 | 10 |
hematologic cancer | 9.62e-07 | 51 |
immune system cancer | 9.62e-07 | 51 |