FFCP PHASE1:Hg19::chr1:62784935..62784964,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163782 | |EntrezGene=163782 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27263 | |HGNC=27263 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_ENST00000354381_5end | |association_with_transcript=7bp_to_ENST00000354381_5end | ||
|cluster_id=chr1:62784935..62784964,- | |||
|coexpression_cluster_id=C3990 | |||
|description=CAGE_peak_3_at_KANK4_5end | |description=CAGE_peak_3_at_KANK4_5end | ||
|id=chr1:62784935..62784964,- | |id=chr1:62784935..62784964,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.45e-17;19!CL:0002541;1.81e-10;3!CL:0002577;2.18e-09;3!CL:0002536;2.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.39e-17,19;CL:0002541,1.73e-10,3;CL:0002577,2.36e-09,3;CL:0002536,1.83e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.43e-10;3!UBERON:0003057;5.43e-10;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.41e-20!115;UBERON:0001049!7.69e-16!57;UBERON:0005068!7.69e-16!57;UBERON:0006241!7.69e-16!57;UBERON:0007135!7.69e-16!57;UBERON:0004121!4.69e-15!169;UBERON:0000924!8.38e-15!173;UBERON:0006601!8.38e-15!173;UBERON:0005743!3.16e-13!86;UBERON:0000073!3.57e-13!94;UBERON:0001016!3.57e-13!94;UBERON:0005631!5.61e-13!14;UBERON:0000158!5.61e-13!14;UBERON:0001017!8.85e-13!82;UBERON:0003075!7.18e-12!86;UBERON:0007284!7.18e-12!86;UBERON:0002346!1.90e-11!90;UBERON:0000955!2.36e-11!69;UBERON:0006238!2.36e-11!69;UBERON:0002616!2.37e-11!59;UBERON:0000153!4.63e-11!129;UBERON:0007811!4.63e-11!129;UBERON:0002298!7.25e-11!8;UBERON:0000033!7.01e-10!123;UBERON:0003124!9.27e-10!7;UBERON:0003076!4.39e-09!15;UBERON:0003057!4.39e-09!15;UBERON:0003080!5.19e-09!42;UBERON:0002780!2.64e-08!41;UBERON:0001890!2.64e-08!41;UBERON:0006240!2.64e-08!41;UBERON:0000478!3.02e-07!24;UBERON:0004732!4.64e-07!13;UBERON:0000475!7.28e-07!365;UBERON:0002020!9.24e-07!34;UBERON:0003528!9.24e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.41e-19;10!UBERON:0000158;2.41e-19;10!UBERON:0000478;8.84e-19;24!UBERON:0002298;1.34e-17;6!UBERON:0001987;9.89e-12;4!UBERON:0000305;3.43e-11;7!UBERON:0004732;1.43e-10;13!UBERON:0003124;1.81e-10;3!UBERON:0000920;1.81e-10;3!UBERON:0002240;5.43e-10;3!UBERON:0005174;5.43e-10;3!UBERON:0001137;5.43e-10;3!UBERON:0000988;6.31e-10;3!UBERON:0001896;2.18e-09;3!UBERON:0005290;2.18e-09;3!UBERON:0004733;1.97e-08;12!UBERON:0002028;1.97e-08;12!UBERON:0005162;1.89e-07;2!UBERON:0000122;1.89e-07;2!UBERON:0002148;3.76e-07;2!UBERON:0006331;3.76e-07;2!UBERON:0009662;3.76e-07;2!UBERON:0002784;5.00e-07;4!UBERON:0001897;6.96e-07;2!UBERON:0010225;6.96e-07;2!UBERON:0001829;7.17e-07;2!UBERON:0001041;7.46e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.27e-29,14;UBERON:0000158,2.27e-29,14;UBERON:0003124,1.41e-20,7;UBERON:0000478,6.96e-19,24;UBERON:0002298,8.65e-18,6;UBERON:0003076,5.78e-15,15;UBERON:0003057,5.78e-15,15;UBERON:0001987,7.78e-12,4;UBERON:0004340,7.78e-12,4;UBERON:0000305,3.16e-11,7;UBERON:0004732,1.14e-10,13;UBERON:0000920,1.73e-10,3;UBERON:0002240,4.09e-10,3;UBERON:0005174,4.09e-10,3;UBERON:0001137,4.09e-10,3;UBERON:0000988,5.20e-10,3;UBERON:0004871,9.08e-10,8;UBERON:0001896,1.71e-09,3;UBERON:0005290,1.71e-09,3;UBERON:0010096,1.71e-09,3;UBERON:0001049,1.76e-09,56;UBERON:0005068,1.76e-09,56;UBERON:0006241,1.76e-09,56;UBERON:0007135,1.76e-09,56;UBERON:0004733,1.61e-08,12;UBERON:0002028,1.61e-08,12;UBERON:0007277,1.61e-08,12;UBERON:0004121,1.28e-07,171;UBERON:0000924,1.28e-07,171;UBERON:0006601,1.28e-07,171;UBERON:0005162,2.21e-07,2;UBERON:0000122,2.21e-07,2;UBERON:0002148,3.19e-07,2;UBERON:0006331,3.19e-07,2;UBERON:0009662,3.19e-07,2;UBERON:0003075,3.38e-07,82;UBERON:0007284,3.38e-07,82;UBERON:0002784,4.31e-07,4;UBERON:0010371,4.90e-07,104;UBERON:0001897,6.01e-07,2;UBERON:0010225,6.01e-07,2;UBERON:0007023,6.43e-07,114;UBERON:0004923,7.72e-07,66;UBERON:0001829,8.57e-07,2 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,3.71350332621293,6.59417445571134,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95285947051099,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.966304265816484,0.545492241181669,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.00789276919316,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,2.42502057157008,3.32870879020994,1.20956117331872,0.496215615637554,1.99500565274481,1.40330047216537,0.128139149255701,2.04682899626681,0.482561763430822,0,0,0,0,0,0,0,1.40354529212299,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.9273691048295,0,0,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0,0.356128142586949,1.32227932288782,0.576570202095319,0.127612712494584,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.659006605437454,0.43050537267123,0,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,34.6492747894809,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,4.05865624054073,5.93929361665277,2.45728561679386,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,2.17499872630438,0,0,1.18193840883968,0.344743373241465,0.874813840149763,0.868124974666461,0,0,0,0,0.886642856860642,0.658156191461918,0.10893846351899,0,0,0,4.6112780877612,0.987334088507493,3.25942115766024,6.38002319463839,3.57230614267263,12.2597998484286,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,3.16785325009182,3.21031058919516,0.937057782901357,0,0,0,0,2.41981432097328,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0.794305140223502,0.90392296312213,0,0,0.253243183823515,0.195551382734803,0,0.213452994739353,3.39676336289621,1.00863292007874,0,0.171594997861965,0,0,0,0,0,0,2.60055530911367,0,0.958337652243951,0,0,0,0,1.60412296808179,0,0.199679000498991,0,0,0.335917362433631,0,0,1.41809728153003,1.07140615895516,1.68508859635462,0.492137407573744,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.364497339948148,0,0,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97520666736664,4.39562051629272,2.90911723833918,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,5.98419583706421,13.0358744891804,7.04594826555962,4.91808946064707,0.157054096250234,0,0,0,2.86704597845036,1.55300672151593,3.22901295295194,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,1.23520578864389,0.219284049578707,0,0,0,0,0.690860683462397,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.449604575675217,0,0.319267718114302,0.82046545696302,0,0.691572524642179,0,7.13847101295772,0,0.11796972334774,0,0.231051332300676,0.381382095467167,0,2.3869946653953,0.150420656698515,0,0.781514011233092,0.523813388962845,0,0,1.01306376927592,0,0.620060389503552,0.634158101939068,0,2.19303106742873,0,0,0.766574565837572,0,1.3451348888753,0,0,1.95145214357805,0,0,3.53442611479525,0.591954962065642,0,0,0.549451649953598,0.314231179832004,0.280272163313789,1.82631744101899,0,0,0.714765441766563,0,0,0,0,0,0,0,2.15113679410139,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0.485710993059139,0,0,0,0,0.109940516745429,0.301925687133347,0.0771741581079447,0.655678681511872,0,0,0,5.88925401344836,2.97046400327086,3.8039015482506,0,0,0.128915775947154,0,0,0,0,0,2.2936464170227,4.01350832824064,0,0.611923411718232,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0.151557396436479,0.267964130156178,4.1458471972939,1.44806194206653,0.426467963801962,1.1903221573187,0.129177819672012,0.0620747142958579,0,0,0.606351566874658,0,0.684466602170562,0.134704106029175,0.286888821570705,1.99596213927608,0,0,0,0,4.69281884806909,0,0,0,0,0 | |phase1_expression=0.54503513781167,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,3.71350332621293,6.59417445571134,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95285947051099,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.966304265816484,0.545492241181669,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.00789276919316,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,2.42502057157008,3.32870879020994,1.20956117331872,0.496215615637554,1.99500565274481,1.40330047216537,0.128139149255701,2.04682899626681,0.482561763430822,0,0,0,0,0,0,0,1.40354529212299,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.9273691048295,0,0,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0,0.356128142586949,1.32227932288782,0.576570202095319,0.127612712494584,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.659006605437454,0.43050537267123,0,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,34.6492747894809,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,4.05865624054073,5.93929361665277,2.45728561679386,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,2.17499872630438,0,0,1.18193840883968,0.344743373241465,0.874813840149763,0.868124974666461,0,0,0,0,0.886642856860642,0.658156191461918,0.10893846351899,0,0,0,4.6112780877612,0.987334088507493,3.25942115766024,6.38002319463839,3.57230614267263,12.2597998484286,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,3.16785325009182,3.21031058919516,0.937057782901357,0,0,0,0,2.41981432097328,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0.794305140223502,0.90392296312213,0,0,0.253243183823515,0.195551382734803,0,0.213452994739353,3.39676336289621,1.00863292007874,0,0.171594997861965,0,0,0,0,0,0,2.60055530911367,0,0.958337652243951,0,0,0,0,1.60412296808179,0,0.199679000498991,0,0,0.335917362433631,0,0,1.41809728153003,1.07140615895516,1.68508859635462,0.492137407573744,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.364497339948148,0,0,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97520666736664,4.39562051629272,2.90911723833918,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,5.98419583706421,13.0358744891804,7.04594826555962,4.91808946064707,0.157054096250234,0,0,0,2.86704597845036,1.55300672151593,3.22901295295194,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,1.23520578864389,0.219284049578707,0,0,0,0,0.690860683462397,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.449604575675217,0,0.319267718114302,0.82046545696302,0,0.691572524642179,0,7.13847101295772,0,0.11796972334774,0,0.231051332300676,0.381382095467167,0,2.3869946653953,0.150420656698515,0,0.781514011233092,0.523813388962845,0,0,1.01306376927592,0,0.620060389503552,0.634158101939068,0,2.19303106742873,0,0,0.766574565837572,0,1.3451348888753,0,0,1.95145214357805,0,0,3.53442611479525,0.591954962065642,0,0,0.549451649953598,0.314231179832004,0.280272163313789,1.82631744101899,0,0,0.714765441766563,0,0,0,0,0,0,0,2.15113679410139,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0.485710993059139,0,0,0,0,0.109940516745429,0.301925687133347,0.0771741581079447,0.655678681511872,0,0,0,5.88925401344836,2.97046400327086,3.8039015482506,0,0,0.128915775947154,0,0,0,0,0,2.2936464170227,4.01350832824064,0,0.611923411718232,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0.151557396436479,0.267964130156178,4.1458471972939,1.44806194206653,0.426467963801962,1.1903221573187,0.129177819672012,0.0620747142958579,0,0,0.606351566874658,0,0.684466602170562,0.134704106029175,0.286888821570705,1.99596213927608,0,0,0,0,4.69281884806909,0,0,0,0,0 | ||
|short_description=p3@KANK4 | |short_description=p3@KANK4 | ||
}} | }} |
Latest revision as of 19:51, 18 September 2015
Short description: | p3@KANK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KANK4_5end |
Coexpression cluster: | C3990_Wilms_choriocarcinoma_chorionic_mature_Amniotic_amniotic_optic |
Association with transcript: | 7bp_to_ENST00000354381_5end |
EntrezGene: | KANK4 |
HGNC: | 27263 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.39e-17 | 19 |
chorionic membrane mesenchymal stem cell | 1.73e-10 | 3 |
placental epithelial cell | 2.36e-09 | 3 |
amniotic epithelial cell | 1.83e-07 | 2 |