FFCP PHASE1:Hg19::chr10:68685786..68685801,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:68685786..68685801,+ to FFCP PHASE1:Hg19::chr10:68685786..68685801,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=347731 | |EntrezGene=347731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19410 | |HGNC=19410 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VH5 | |UniProt=Q86VH5 | ||
|association_with_transcript=0bp_to_ENST00000373722,NM_178011,uc001jmy.2,uc001jmz.1_5end | |||
|cluster_id=chr10:68685786..68685801,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_LRRTM3_5end | |||
|id=chr10:68685786..68685801,+ | |||
|ontology_enrichment_celltype=CL:0000047!8.65e-09!8;CL:0000540!8.78e-07!6;CL:0000031!8.78e-07!6;CL:0000404!8.78e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.55e-07;6!CL:0000404;2.55e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.74e-10,8;CL:0000540,2.50e-07,6;CL:0000031,2.50e-07,6;CL:0000404,2.50e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.46e-17;82!UBERON:0006215;1.32e-07;3!CL:0000031;2.55e-07;6!UBERON:0006241;9.77e-07;3!UBERON:0003057;9.77e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.23e-64!82;UBERON:0005743!4.41e-62!86;UBERON:0001049!1.01e-58!57;UBERON:0005068!1.01e-58!57;UBERON:0006241!1.01e-58!57;UBERON:0007135!1.01e-58!57;UBERON:0000073!1.34e-58!94;UBERON:0001016!1.34e-58!94;UBERON:0002616!9.59e-53!59;UBERON:0000955!5.27e-51!69;UBERON:0006238!5.27e-51!69;UBERON:0002780!6.67e-49!41;UBERON:0001890!6.67e-49!41;UBERON:0006240!6.67e-49!41;UBERON:0003080!2.35e-47!42;UBERON:0003075!4.87e-45!86;UBERON:0007284!4.87e-45!86;UBERON:0002346!1.74e-43!90;UBERON:0001893!5.37e-41!34;UBERON:0002020!5.72e-41!34;UBERON:0003528!5.72e-41!34;UBERON:0002791!7.81e-40!33;UBERON:0001869!7.29e-39!32;UBERON:0004121!1.24e-36!169;UBERON:0000924!4.00e-36!173;UBERON:0006601!4.00e-36!173;UBERON:0007023!1.14e-35!115;UBERON:0003056!1.44e-33!61;UBERON:0000956!2.21e-30!25;UBERON:0000203!2.21e-30!25;UBERON:0002619!9.32e-29!22;UBERON:0001950!1.48e-26!20;UBERON:0000033!2.79e-26!123;UBERON:0000153!4.85e-25!129;UBERON:0007811!4.85e-25!129;UBERON:0003076!2.62e-12!15;UBERON:0003057!2.62e-12!15;UBERON:0002420!3.10e-12!9;UBERON:0007245!3.10e-12!9;UBERON:0010009!3.10e-12!9;UBERON:0010011!3.10e-12!9;UBERON:0000454!3.10e-12!9;UBERON:0002308!6.95e-12!9;UBERON:0000125!6.95e-12!9;UBERON:0000025!2.89e-11!194;UBERON:0001871!5.96e-11!7;UBERON:0004732!2.98e-10!13;UBERON:0009663!8.67e-10!7;UBERON:0000064!1.26e-09!219;UBERON:0004733!2.66e-09!12;UBERON:0002028!2.66e-09!12;UBERON:0007277!2.66e-09!12;UBERON:0001894!3.81e-09!7;UBERON:0006222!3.81e-09!7;UBERON:0000200!7.20e-09!6;UBERON:0001872!1.33e-07!5;UBERON:0002021!1.50e-07!5;UBERON:0002298!1.66e-07!8;UBERON:0000349!1.82e-07!5;UBERON:0000119!1.84e-07!312;UBERON:0000483!2.00e-07!309;UBERON:0004111!2.18e-07!241;UBERON:0000475!2.72e-07!365;UBERON:0000922!4.02e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.59e-52;41!UBERON:0001890;4.59e-52;41!UBERON:0001893;2.48e-51;34!UBERON:0003528;2.61e-51;34!UBERON:0002020;2.61e-51;34!UBERON:0001869;4.17e-51;32!UBERON:0002791;5.24e-51;32!UBERON:0000073;3.39e-48;53!UBERON:0002616;3.39e-48;53!UBERON:0002619;3.82e-46;22!UBERON:0000956;3.27e-43;25!UBERON:0000203;3.27e-43;25!UBERON:0001950;1.53e-42;20!UBERON:0001017;3.91e-33;75!UBERON:0000955;1.04e-32;68!UBERON:0001016;2.08e-27;83!UBERON:0002420;5.44e-19;9!UBERON:0007245;5.44e-19;9!UBERON:0010009;5.44e-19;9!UBERON:0010011;5.44e-19;9!UBERON:0000454;5.44e-19;9!UBERON:0000125;1.93e-18;9!UBERON:0002308;1.93e-18;9!UBERON:0009663;5.44e-15;7!UBERON:0001871;5.73e-15;6!UBERON:0004732;2.88e-14;13!UBERON:0001894;6.34e-14;7!UBERON:0000200;1.64e-13;6!UBERON:0007023;3.61e-13;114!UBERON:0004733;9.65e-13;12!UBERON:0002028;9.65e-13;12!UBERON:0002298;8.97e-12;6!UBERON:0001872;1.86e-11;5!UBERON:0002021;2.48e-11;5!UBERON:0000349;3.35e-11;5!UBERON:0011216;1.72e-10;132!UBERON:0000369;8.14e-10;4!UBERON:0002435;8.14e-10;4!UBERON:0000204;8.14e-10;4!UBERON:0003296;1.62e-08;4!UBERON:0010133;1.62e-08;4!UBERON:0002680;3.58e-08;9!UBERON:0001895;3.58e-08;9!UBERON:0002784;7.34e-08;4!UBERON:0005383;8.10e-08;3!UBERON:0005382;8.10e-08;3!UBERON:0001870;9.96e-08;3!UBERON:0010314;4.74e-07;132!UBERON:0000988;8.67e-07;3!UBERON:0002240;9.77e-07;3!UBERON:0005174;9.77e-07;3!UBERON:0001137;9.77e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.40e-90,56;UBERON:0005068,3.40e-90,56;UBERON:0006241,3.40e-90,56;UBERON:0007135,3.40e-90,56;UBERON:0001017,1.72e-89,81;UBERON:0000073,1.16e-84,53;UBERON:0002616,1.16e-84,53;UBERON:0001016,1.30e-81,89;UBERON:0000955,2.03e-73,68;UBERON:0006238,2.03e-73,68;UBERON:0002780,2.04e-73,41;UBERON:0001890,2.04e-73,41;UBERON:0003080,2.04e-73,41;UBERON:0006240,2.04e-73,41;UBERON:0003075,7.62e-64,82;UBERON:0007284,7.62e-64,82;UBERON:0001893,1.87e-60,34;UBERON:0003528,2.07e-60,34;UBERON:0002020,2.07e-60,34;UBERON:0002346,4.01e-60,86;UBERON:0001869,5.98e-57,32;UBERON:0002791,8.18e-57,32;UBERON:0003056,9.57e-53,61;UBERON:0010371,8.35e-51,104;UBERON:0004121,5.91e-47,171;UBERON:0000924,5.91e-47,171;UBERON:0006601,5.91e-47,171;UBERON:0002619,4.01e-46,22;UBERON:0000956,4.03e-43,25;UBERON:0000203,4.03e-43,25;UBERON:0001950,1.66e-42,20;UBERON:0007023,5.87e-40,114;UBERON:0010314,9.74e-37,132;UBERON:0011216,1.84e-30,223;UBERON:0002420,5.29e-19,9;UBERON:0007245,5.29e-19,9;UBERON:0010009,5.29e-19,9;UBERON:0010011,5.29e-19,9;UBERON:0000454,5.29e-19,9;UBERON:0000125,1.98e-18,9;UBERON:0002308,1.98e-18,9;UBERON:0003076,1.55e-17,15;UBERON:0003057,1.55e-17,15;UBERON:0000025,2.24e-17,192;UBERON:0009663,5.29e-15,7;UBERON:0001871,5.99e-15,6;UBERON:0004732,3.11e-14,13;UBERON:0001894,5.93e-14,7;UBERON:0006222,5.93e-14,7;UBERON:0000200,1.68e-13,6;UBERON:0004733,1.03e-12,12;UBERON:0002028,1.03e-12,12;UBERON:0007277,1.03e-12,12;UBERON:0002298,9.53e-12,6;UBERON:0001872,1.95e-11,5;UBERON:0002021,2.35e-11,5;UBERON:0000349,3.22e-11,5;UBERON:0004111,4.94e-11,240;UBERON:0000369,8.06e-10,4;UBERON:0002435,8.06e-10,4;UBERON:0000204,8.06e-10,4;UBERON:0010082,8.06e-10,4;UBERON:0000922,6.30e-09,592;UBERON:0000483,1.22e-08,306;UBERON:0003296,1.56e-08,4;UBERON:0010133,1.56e-08,4;UBERON:0000119,2.04e-08,309;UBERON:0002680,3.77e-08,9;UBERON:0001895,3.77e-08,9;UBERON:0010092,3.77e-08,9;UBERON:0002050,6.13e-08,564;UBERON:0002784,7.08e-08,4;UBERON:0005383,8.11e-08,3;UBERON:0005382,8.11e-08,3;UBERON:0001870,1.05e-07,3;UBERON:0000923,1.10e-07,560;UBERON:0010316,1.10e-07,560;UBERON:0005291,1.10e-07,560;UBERON:0006598,1.10e-07,560;UBERON:0010317,1.10e-07,560;UBERON:0002532,1.10e-07,560;UBERON:0005423,1.54e-07,581;UBERON:0000988,9.12e-07,3;UBERON:0002240,9.68e-07,3;UBERON:0005174,9.68e-07,3;UBERON:0001137,9.68e-07,3 | |||
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| ||
|short_description=p1@LRRTM3 | |||
}} | }} |
Latest revision as of 21:48, 18 September 2015
Short description: | p1@LRRTM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRTM3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000373722, NM_178011, uc001jmy.2, uc001jmz.1_5end |
EntrezGene: | LRRTM3 |
HGNC: | 19410 |
UniProt: | Q86VH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.74e-10 | 8 |
neuron | 2.50e-07 | 6 |
neuroblast | 2.50e-07 | 6 |
electrically signaling cell | 2.50e-07 | 6 |