FFCP PHASE1:Hg19::chr10:70066616..70066659,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64081 | |EntrezGene=64081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23301 | |HGNC=23301 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7D0,Q8NAD7 | |UniProt=F8W7D0,Q8NAD7 | ||
|association_with_transcript=0bp_to_ENST00000277795,uc001jnv.1_5end | |association_with_transcript=0bp_to_ENST00000277795,uc001jnv.1_5end | ||
|cluster_id=chr10:70066616..70066659,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_2_at_PBLD_5end | |description=CAGE_peak_2_at_PBLD_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!4.92e-09!12;CL:0000417!4.92e-09!12;CL:0000668!4.92e-09!12;CL:0000414!4.92e-09!12;CL:0000412!4.92e-09!12;CL:0000182!4.92e-09!12 | |ontology_enrichment_celltype=CL:0000181!4.92e-09!12;CL:0000417!4.92e-09!12;CL:0000668!4.92e-09!12;CL:0000414!4.92e-09!12;CL:0000412!4.92e-09!12;CL:0000182!4.92e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.02e-07;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.02e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.02e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.72e-11;2!UBERON:0009497;7.60e-10;13!UBERON:0003104;2.06e-09;31!UBERON:0004161;7.17e-08;11 | |ontology_enrichment_development_v019=UBERON:0007297;4.72e-11;2!UBERON:0009497;7.60e-10;13!UBERON:0003104;2.06e-09;31!UBERON:0004161;7.17e-08;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.23e-12!115;UBERON:0005409!1.56e-11!35;UBERON:0005172!1.35e-10!55;UBERON:0005173!1.35e-10!55;UBERON:0009854!1.58e-10!23;UBERON:0003929!1.59e-10!54;UBERON:0004921!1.62e-10!129;UBERON:0004185!1.62e-10!129;UBERON:0002417!3.86e-10!61;UBERON:0000916!3.86e-10!61;UBERON:0000160!5.39e-10!27;UBERON:0000059!6.25e-10!11;UBERON:0001007!1.73e-09!155;UBERON:0001555!1.73e-09!155;UBERON:0007026!1.73e-09!155;UBERON:0009497!1.82e-09!25;UBERON:0000015!1.82e-09!25;UBERON:0002423!1.82e-09!25;UBERON:0006235!1.82e-09!25;UBERON:0004161!1.82e-09!25;UBERON:0008835!4.09e-09!22;UBERON:0003894!4.09e-09!22;UBERON:0009856!5.27e-09!26;UBERON:0002107!7.74e-09!19;UBERON:0006925!7.74e-09!19;UBERON:0008836!7.74e-09!19;UBERON:0005057!9.15e-09!26;UBERON:0004119!1.35e-08!169;UBERON:0000925!1.35e-08!169;UBERON:0006595!1.35e-08!169;UBERON:0006947!7.89e-08!3;UBERON:0004054!7.89e-08!3;UBERON:0007499!9.52e-08!25;UBERON:0004907!9.71e-08!5;UBERON:0000062!1.01e-07!511;UBERON:0005911!1.02e-07!82;UBERON:0005177!1.33e-07!107 | |ontology_enrichment_uberon=UBERON:0007023!2.23e-12!115;UBERON:0005409!1.56e-11!35;UBERON:0005172!1.35e-10!55;UBERON:0005173!1.35e-10!55;UBERON:0009854!1.58e-10!23;UBERON:0003929!1.59e-10!54;UBERON:0004921!1.62e-10!129;UBERON:0004185!1.62e-10!129;UBERON:0002417!3.86e-10!61;UBERON:0000916!3.86e-10!61;UBERON:0000160!5.39e-10!27;UBERON:0000059!6.25e-10!11;UBERON:0001007!1.73e-09!155;UBERON:0001555!1.73e-09!155;UBERON:0007026!1.73e-09!155;UBERON:0009497!1.82e-09!25;UBERON:0000015!1.82e-09!25;UBERON:0002423!1.82e-09!25;UBERON:0006235!1.82e-09!25;UBERON:0004161!1.82e-09!25;UBERON:0008835!4.09e-09!22;UBERON:0003894!4.09e-09!22;UBERON:0009856!5.27e-09!26;UBERON:0002107!7.74e-09!19;UBERON:0006925!7.74e-09!19;UBERON:0008836!7.74e-09!19;UBERON:0005057!9.15e-09!26;UBERON:0004119!1.35e-08!169;UBERON:0000925!1.35e-08!169;UBERON:0006595!1.35e-08!169;UBERON:0006947!7.89e-08!3;UBERON:0004054!7.89e-08!3;UBERON:0007499!9.52e-08!25;UBERON:0004907!9.71e-08!5;UBERON:0000062!1.01e-07!511;UBERON:0005911!1.02e-07!82;UBERON:0005177!1.33e-07!107 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.01e-30;22!UBERON:0000160;1.72e-27;17!UBERON:0004921;4.63e-18;33!UBERON:0000059;1.75e-16;11!UBERON:0006947;1.48e-15;3!UBERON:0004054;1.48e-15;3!UBERON:0001155;2.64e-14;9!UBERON:0002423;1.96e-12;25!UBERON:0005904;8.38e-12;4!UBERON:0002108;1.66e-10;4!UBERON:0001007;3.77e-10;81!UBERON:0002107;8.76e-10;19!UBERON:0006925;8.76e-10;19!UBERON:0004907;1.17e-09;5!UBERON:0000058;4.10e-08;10!UBERON:0001555;7.90e-07;54 | |ontology_enrichment_uberon_v019=UBERON:0005409;3.01e-30;22!UBERON:0000160;1.72e-27;17!UBERON:0004921;4.63e-18;33!UBERON:0000059;1.75e-16;11!UBERON:0006947;1.48e-15;3!UBERON:0004054;1.48e-15;3!UBERON:0001155;2.64e-14;9!UBERON:0002423;1.96e-12;25!UBERON:0005904;8.38e-12;4!UBERON:0002108;1.66e-10;4!UBERON:0001007;3.77e-10;81!UBERON:0002107;8.76e-10;19!UBERON:0006925;8.76e-10;19!UBERON:0004907;1.17e-09;5!UBERON:0000058;4.10e-08;10!UBERON:0001555;7.90e-07;54 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.88e-27,17;UBERON:0005409,1.79e-26,25;UBERON:0000059,1.90e-16,11;UBERON:0006947,1.56e-15,3;UBERON:0004054,1.56e-15,3;UBERON:0004921,1.10e-14,118;UBERON:0001155,2.87e-14,9;UBERON:0009854,1.22e-13,23;UBERON:0009497,1.93e-12,25;UBERON:0000015,1.93e-12,25;UBERON:0002423,1.93e-12,25;UBERON:0006235,1.93e-12,25;UBERON:0004161,1.93e-12,25;UBERON:0001007,2.06e-12,145;UBERON:0001555,2.06e-12,145;UBERON:0007026,2.06e-12,145;UBERON:0009856,6.40e-12,26;UBERON:0005904,8.70e-12,4;UBERON:0008835,4.44e-11,22;UBERON:0003894,4.44e-11,22;UBERON:0004119,8.27e-11,160;UBERON:0000925,8.27e-11,160;UBERON:0006595,8.27e-11,160;UBERON:0002108,1.66e-10,4;UBERON:0002107,8.76e-10,19;UBERON:0006925,8.76e-10,19;UBERON:0008836,8.76e-10,19;UBERON:0005172,9.82e-10,54;UBERON:0005173,9.82e-10,54;UBERON:0007499,1.23e-09,25;UBERON:0004907,1.28e-09,5;UBERON:0003929,1.34e-09,54;UBERON:0002417,1.50e-08,60;UBERON:0000916,1.50e-08,60;UBERON:0011216,3.92e-07,223;UBERON:0005911,9.41e-07,82 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,1.15921234294021,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,40.6690029420398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,453.783024662154,157.25235466842,121.111930869688,0,19.3091848512688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90062679019893,0,0,0,0,0,0,0,0,0,0.527758144464379,0,0,0,0,0.812839312631559,0,0,0,0.223874754722178,0,0,0,0,0,151.470287122152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,149.123780430418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5269135004138,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90709788827869,1.76352923497993,0,0,0,0,1.43216939740487,0,0,0,0,2.90799823828566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,1.13082457147153,0,28.8625960012766,102.168487001357,78.2118585515041,0,0,0,0.134802265961354,0,0,0,0,0,1.18375320854817,105.261922962338,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,14.1528601276044,0,0,0,0,0,0,0,0,0,0,0,0,5.54977786322317,0,1.72908500584927,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.458320848023367,0,0.399358000997982,2.14613024068285,0,0,0,0,0.315132729228895,0.494495150286999,0.943649613958588,12.5002901523731,0.0846733320657845,0,0,0,0,0,0,0,0,0,90.7841748086763,24.0766559539641,0,0,0,0,0,0,0,0,0,0,0,0,0,131.45735360924,111.305786686266,0,0,1.53978154095896,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,61.7396068874143,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.118193840883968,0,0.313972371402056,0.157115589916002,0.280272163313789,10.9579046461139,0.431855182437243,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0.782988022584546,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0,0,0,198.491934653634,181.622994778788,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.580120991762195,0,0,0,0,4.3820183294791,0,0,0,0,0,70.3605697885483,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0.267964130156178,0,0,0,0,0,0.124149428591716,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,1.15921234294021,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,40.6690029420398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,453.783024662154,157.25235466842,121.111930869688,0,19.3091848512688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90062679019893,0,0,0,0,0,0,0,0,0,0.527758144464379,0,0,0,0,0.812839312631559,0,0,0,0.223874754722178,0,0,0,0,0,151.470287122152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,149.123780430418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5269135004138,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90709788827869,1.76352923497993,0,0,0,0,1.43216939740487,0,0,0,0,2.90799823828566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,1.13082457147153,0,28.8625960012766,102.168487001357,78.2118585515041,0,0,0,0.134802265961354,0,0,0,0,0,1.18375320854817,105.261922962338,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,14.1528601276044,0,0,0,0,0,0,0,0,0,0,0,0,5.54977786322317,0,1.72908500584927,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.458320848023367,0,0.399358000997982,2.14613024068285,0,0,0,0,0.315132729228895,0.494495150286999,0.943649613958588,12.5002901523731,0.0846733320657845,0,0,0,0,0,0,0,0,0,90.7841748086763,24.0766559539641,0,0,0,0,0,0,0,0,0,0,0,0,0,131.45735360924,111.305786686266,0,0,1.53978154095896,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,61.7396068874143,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.118193840883968,0,0.313972371402056,0.157115589916002,0.280272163313789,10.9579046461139,0.431855182437243,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0.782988022584546,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0,0,0,198.491934653634,181.622994778788,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.580120991762195,0,0,0,0,4.3820183294791,0,0,0,0,0,70.3605697885483,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0.267964130156178,0,0,0,0,0,0.124149428591716,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p2@PBLD | |short_description=p2@PBLD | ||
}} | }} |
Latest revision as of 22:45, 18 September 2015
Short description: | p2@PBLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PBLD_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000277795, uc001jnv.1_5end |
EntrezGene: | PBLD |
HGNC: | 23301 |
UniProt: | F8W7D0Q8NAD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.02e-07 | 12 |