FFCP PHASE1:Hg19::chr12:52887237..52887248,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3853 | |EntrezGene=3853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6443 | |HGNC=6443 | ||
|TSSclassifier=strong | |||
|UniProt=P02538 | |UniProt=P02538 | ||
|association_with_transcript=-56bp_to_NM_005554,uc001sam.2_5end | |association_with_transcript=-56bp_to_NM_005554,uc001sam.2_5end | ||
|cluster_id=chr12:52887237..52887248,- | |||
|coexpression_cluster_id=C1170 | |||
|description=CAGE_peak_12_at_KRT6A_5end | |description=CAGE_peak_12_at_KRT6A_5end | ||
|id=chr12:52887237..52887248,- | |id=chr12:52887237..52887248,- | ||
|ontology_enrichment_celltype=CL:0002159!6.62e-30!13;CL:0002076!2.95e-29!43;CL:0002368!1.36e-23!13;CL:0000223!4.78e-20!59;CL:0000066!1.10e-17!254;CL:0002202!4.54e-16!9;CL:0002632!4.54e-16!9;CL:0000349!2.24e-13!3;CL:0002577!2.24e-13!3;CL:0000622!2.36e-13!5;CL:0000068!3.98e-13!3;CL:0000069!3.98e-13!3;CL:0000307!3.98e-13!3;CL:0000377!3.98e-13!3;CL:0002328!4.69e-13!3;CL:0002621!7.03e-13!3;CL:0000362!7.95e-13!8;CL:0002077!8.11e-13!33;CL:0002166!1.63e-12!3;CL:0000240!2.67e-11!6;CL:0000311!2.67e-11!6;CL:0000079!2.67e-11!6;CL:0000237!2.67e-11!6;CL:0000036!2.67e-11!6;CL:0000357!2.67e-11!6;CL:0000114!2.67e-11!6;CL:0002251!3.68e-11!21;CL:0000154!3.87e-11!6;CL:0000244!7.77e-10!4;CL:0000731!7.77e-10!4;CL:0000575!9.30e-10!2;CL:0000317!1.74e-09!2;CL:1000448!1.74e-09!2;CL:0002308!1.74e-09!2;CL:0002140!1.74e-09!2;CL:0002327!6.00e-09!4;CL:0000312!6.14e-08!5;CL:0000220!1.30e-07!246;CL:0002321!1.69e-07!248;CL:0000150!1.96e-07!9 | |ontology_enrichment_celltype=CL:0002159!6.62e-30!13;CL:0002076!2.95e-29!43;CL:0002368!1.36e-23!13;CL:0000223!4.78e-20!59;CL:0000066!1.10e-17!254;CL:0002202!4.54e-16!9;CL:0002632!4.54e-16!9;CL:0000349!2.24e-13!3;CL:0002577!2.24e-13!3;CL:0000622!2.36e-13!5;CL:0000068!3.98e-13!3;CL:0000069!3.98e-13!3;CL:0000307!3.98e-13!3;CL:0000377!3.98e-13!3;CL:0002328!4.69e-13!3;CL:0002621!7.03e-13!3;CL:0000362!7.95e-13!8;CL:0002077!8.11e-13!33;CL:0002166!1.63e-12!3;CL:0000240!2.67e-11!6;CL:0000311!2.67e-11!6;CL:0000079!2.67e-11!6;CL:0000237!2.67e-11!6;CL:0000036!2.67e-11!6;CL:0000357!2.67e-11!6;CL:0000114!2.67e-11!6;CL:0002251!3.68e-11!21;CL:0000154!3.87e-11!6;CL:0000244!7.77e-10!4;CL:0000731!7.77e-10!4;CL:0000575!9.30e-10!2;CL:0000317!1.74e-09!2;CL:1000448!1.74e-09!2;CL:0002308!1.74e-09!2;CL:0002140!1.74e-09!2;CL:0002327!6.00e-09!4;CL:0000312!6.14e-08!5;CL:0000220!1.30e-07!246;CL:0002321!1.69e-07!248;CL:0000150!1.96e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.43e-33;14!CL:0000575;1.83e-27;2!CL:0000317;4.08e-27;2!CL:1000448;4.08e-27;2!CL:0002308;4.08e-27;2!CL:0002140;4.08e-27;2!CL:0000362;1.07e-23;9!CL:0000240;1.98e-20;6!CL:0000311;1.98e-20;6!CL:0000079;1.98e-20;6!CL:0000237;1.98e-20;6!CL:0002577;7.93e-19;3!CL:0002252;5.80e-15;1!CL:0002336;1.84e-14;1!CL:0002261;1.84e-14;1!CL:0002170;1.84e-14;1!CL:0002077;2.76e-13;34!CL:0000312;1.35e-11;5!CL:0000622;1.85e-11;5!CL:0000154;1.06e-09;6!CL:0002076;2.12e-08;42!CL:0002202;7.31e-07;9!CL:0002632;7.31e-07;9!CL:0000150;9.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.70e-33,14;CL:0000575,9.31e-28,2;CL:0000317,6.97e-27,2;CL:1000448,6.97e-27,2;CL:0002308,6.97e-27,2;CL:0002140,6.97e-27,2;CL:0000362,1.72e-23,9;CL:0000240,2.12e-20,6;CL:0000311,2.12e-20,6;CL:0000079,2.12e-20,6;CL:0000237,2.12e-20,6;CL:0000036,2.12e-20,6;CL:0000357,2.12e-20,6;CL:0000114,2.12e-20,6;CL:0002577,6.63e-19,3;CL:0002252,5.42e-15,1;CL:0002336,1.23e-14,1;CL:0002261,1.23e-14,1;CL:0002170,1.23e-14,1;CL:0002077,1.11e-13,34;CL:0000312,1.67e-11,5;CL:0000622,2.29e-11,5;CL:0000076,9.89e-10,63;CL:0000154,1.26e-09,6;CL:0000066,9.78e-09,253;CL:0000221,3.37e-08,72;CL:0002076,6.30e-08,42;CL:0002202,7.87e-07,9;CL:0002632,7.87e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.98e-20;6!CL:0000114;1.98e-20;6!UBERON:0008814;7.03e-08;2!UBERON:0010056;7.03e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002419;4.08e-27;2!UBERON:0007771;4.08e-27;2!UBERON:0003297;4.08e-27;2!UBERON:0001821;4.08e-27;2!UBERON:0003487;4.08e-27;2!UBERON:0001820;4.08e-27;2!UBERON:0001987;2.26e-14;4!UBERON:0001003;2.32e-14;15!UBERON:0007376;2.32e-14;15!UBERON:0000964;2.95e-14;4!UBERON:0010409;2.95e-14;4!UBERON:0010371;1.18e-10;31!UBERON:0003102;7.94e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,6.97e-27,2;UBERON:0007771,6.97e-27,2;UBERON:0003297,6.97e-27,2;UBERON:0001821,6.97e-27,2;UBERON:0003487,6.97e-27,2;UBERON:0001820,6.97e-27,2;UBERON:0005089,6.97e-27,2;UBERON:0005088,6.97e-27,2;UBERON:0001987,1.97e-14,4;UBERON:0004340,1.97e-14,4;UBERON:0000964,2.11e-14,4;UBERON:0010409,2.11e-14,4;UBERON:0004348,2.11e-14,4;UBERON:0005427,2.11e-14,4;UBERON:0001003,3.07e-14,15;UBERON:0007376,3.07e-14,15;UBERON:0007383,3.07e-14,15;UBERON:0003102,7.51e-10,99;UBERON:0003124,1.22e-08,7;UBERON:0005085,4.44e-07,31;UBERON:0001444,9.30e-07,49 | |||
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| ||
|short_description=p12@KRT6A | |short_description=p12@KRT6A | ||
}} | }} |
Latest revision as of 22:56, 18 September 2015
Short description: | p12@KRT6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KRT6A_5end |
Coexpression cluster: | C1170_Placental_Bronchial_nasal_Esophageal_Urothelial_Corneal_Keratinocyte |
Association with transcript: | -56bp_to_NM_005554, uc001sam.2_5end |
EntrezGene: | KRT6A |
HGNC: | 6443 |
UniProt: | P02538 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin gland | 6.97e-27 | 2 |
epidermis gland | 6.97e-27 | 2 |
gland of integumental system | 6.97e-27 | 2 |
sebaceous gland | 6.97e-27 | 2 |
skin sebaceous gland | 6.97e-27 | 2 |
sweat gland | 6.97e-27 | 2 |
sweat gland placode | 6.97e-27 | 2 |
sebaceous gland placode | 6.97e-27 | 2 |
placenta | 1.97e-14 | 4 |
allantois | 1.97e-14 | 4 |
cornea | 2.11e-14 | 4 |
eye surface | 2.11e-14 | 4 |
optic eminence | 2.11e-14 | 4 |
corneal primordium | 2.11e-14 | 4 |
skin epidermis | 3.07e-14 | 15 |
outer epithelium | 3.07e-14 | 15 |
enveloping layer of ectoderm | 3.07e-14 | 15 |
surface structure | 7.51e-10 | 99 |
chorion | 1.22e-08 | 7 |
ectodermal placode | 4.44e-07 | 31 |
subdivision of head | 9.30e-07 | 49 |