FFCP PHASE1:Hg19::chr11:6341050..6341059,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112464 | |EntrezGene=112464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9400 | |HGNC=9400 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=232bp_to_ENST00000532354_5end | |association_with_transcript=232bp_to_ENST00000532354_5end | ||
|cluster_id=chr11:6341050..6341059,- | |||
|description=CAGE_peak_7_at_PRKCDBP_5end | |description=CAGE_peak_7_at_PRKCDBP_5end | ||
|id=chr11:6341050..6341059,- | |id=chr11:6341050..6341059,- | ||
|ontology_enrichment_celltype=CL:0000650;5.96e-08;2!CL:1000500;5.96e-08;2!CL:1000618;5.96e-08;2!CL:1001318;5.96e-08;2!CL:0002173;5.96e-08;2!CL:0002363;5.34e-07;2 | |ontology_enrichment_celltype=CL:0000055!1.90e-16!180;CL:0000222!7.34e-14!119;CL:0000057!2.96e-11!75;CL:0000183!6.95e-11!59;CL:0000680!7.65e-10!57;CL:0000056!7.65e-10!57;CL:0000355!7.65e-10!57;CL:0000187!7.38e-09!54;CL:0000220!1.92e-07!246;CL:0002321!2.50e-07!248;CL:0000192!2.82e-07!42;CL:0000514!2.82e-07!42;CL:0000071!3.89e-07!18;CL:0002546!3.89e-07!18;CL:0002139!4.05e-07!24;CL:0000393!5.33e-07!60;CL:0000211!5.33e-07!60;CL:0000076!8.37e-07!62 | ||
| | |ontology_enrichment_celltype_v019=CL:0000650;5.96e-08;2!CL:1000500;5.96e-08;2!CL:1000618;5.96e-08;2!CL:1001318;5.96e-08;2!CL:0002173;5.96e-08;2!CL:0002363;5.34e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000650,6.48e-08,2;CL:1000500,6.48e-08,2;CL:1000618,6.48e-08,2;CL:1001318,6.48e-08,2;CL:0002173,6.48e-08,2;CL:0002363,9.61e-07,2;CL:0000008,9.61e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;5.34e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003891;2.93e-13;4!UBERON:0001801;7.93e-10;14!UBERON:0000478;2.70e-09;24!UBERON:0002331;5.79e-08;10!UBERON:0003567;5.96e-08;2!UBERON:0003838;5.96e-08;2!UBERON:0003586;5.96e-08;2!UBERON:0005169;5.96e-08;2!UBERON:0002321;5.96e-08;2!UBERON:0005215;5.96e-08;2!UBERON:0002303;5.96e-08;2!UBERON:0002319;5.96e-08;2!UBERON:0003566;5.34e-07;2!UBERON:0001777;5.34e-07;2!UBERON:0000019;5.73e-07;19!UBERON:0000047;5.73e-07;19!UBERON:0004088;5.73e-07;19!UBERON:0010230;5.73e-07;19!UBERON:0006876;8.28e-07;11 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.46e-15!79;UBERON:0007798!2.46e-15!79;UBERON:0004535!3.84e-13!110;UBERON:0001009!6.15e-13!113;UBERON:0004872!5.58e-12!84;UBERON:0000914!2.87e-11!83;UBERON:0002329!2.87e-11!83;UBERON:0003077!2.87e-11!83;UBERON:0003059!2.87e-11!83;UBERON:0007282!2.87e-11!83;UBERON:0009618!2.87e-11!83;UBERON:0007285!2.87e-11!83;UBERON:0004290!3.87e-11!70;UBERON:0000055!6.02e-11!69;UBERON:0001981!4.92e-10!60;UBERON:0007500!4.92e-10!60;UBERON:0004537!4.92e-10!60;UBERON:0006965!4.92e-10!60;UBERON:0001134!2.28e-09!61;UBERON:0002036!2.28e-09!61;UBERON:0003082!2.28e-09!61;UBERON:0002385!4.60e-09!63;UBERON:0001015!4.60e-09!63;UBERON:0000383!4.60e-09!63;UBERON:0005256!1.08e-08!143;UBERON:0000486!1.22e-08!82;UBERON:0000490!1.40e-08!138;UBERON:0000119!4.81e-08!312;UBERON:0000468!6.49e-08!659;UBERON:0002100!6.89e-08!216;UBERON:0001637!1.57e-07!42;UBERON:0003509!1.57e-07!42;UBERON:0004572!1.57e-07!42;UBERON:0000483!1.83e-07!309;UBERON:0000487!3.18e-07!22;UBERON:0001986!3.89e-07!18;UBERON:0004638!3.89e-07!18;UBERON:0004852!3.89e-07!18;UBERON:0000481!4.11e-07!347;UBERON:0003914!5.32e-07!118;UBERON:0000475!5.52e-07!365;UBERON:0000467!9.08e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0003891;2.93e-13;4!UBERON:0001801;7.93e-10;14!UBERON:0000478;2.70e-09;24!UBERON:0002331;5.79e-08;10!UBERON:0003567;5.96e-08;2!UBERON:0003838;5.96e-08;2!UBERON:0003586;5.96e-08;2!UBERON:0005169;5.96e-08;2!UBERON:0002321;5.96e-08;2!UBERON:0005215;5.96e-08;2!UBERON:0002303;5.96e-08;2!UBERON:0002319;5.96e-08;2!UBERON:0003566;5.34e-07;2!UBERON:0001777;5.34e-07;2!UBERON:0000019;5.73e-07;19!UBERON:0000047;5.73e-07;19!UBERON:0004088;5.73e-07;19!UBERON:0010230;5.73e-07;19!UBERON:0006876;8.28e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003891,5.79e-13,4;UBERON:0001801,1.02e-09,14;UBERON:0000478,3.35e-09,24;UBERON:0003567,6.48e-08,2;UBERON:0003838,6.48e-08,2;UBERON:0003586,6.48e-08,2;UBERON:0005169,6.48e-08,2;UBERON:0002321,6.48e-08,2;UBERON:0005215,6.48e-08,2;UBERON:0002303,6.48e-08,2;UBERON:0002319,6.48e-08,2;UBERON:0002331,8.20e-08,10;UBERON:0000358,8.20e-08,10;UBERON:0000307,8.20e-08,10;UBERON:0000091,8.20e-08,10;UBERON:0000087,8.20e-08,10;UBERON:0007010,8.20e-08,10;UBERON:0007806,8.20e-08,10;UBERON:0008780,8.20e-08,10;UBERON:0005728,8.20e-08,10;UBERON:0004535,3.07e-07,109;UBERON:0002049,3.26e-07,78;UBERON:0007798,3.26e-07,78;UBERON:0001009,6.41e-07,112;UBERON:0006876,9.36e-07,11;UBERON:0003566,9.61e-07,2;UBERON:0001777,9.61e-07,2 | |||
|phase1_expression=0.726713517082227,1.2846031433459,1.12763523276777,1.0007329835313,0,0,0,1.89515962028049,0.522371256399677,0.245733936501509,0,0.655324116390517,2.37390280405608,0.74259811776028,0,0,0,0,0.487932798790507,0,0.408001382488506,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.472674085820339,1.33037638477538,1.14185221401064,0.392937226493138,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0.596287222100115,0,1.04142150482278,0.56530794192401,1.25849830862972,1.6507082516404,0.835979866147242,0,0.35576626268671,0,1.20848795132744,0.760272105718513,0.732186172644509,0.367663080345869,0.81014194788176,0.357198913136319,0.44905874525234,0.675668882899933,0,1.89853131913626,0.366403487860815,0,0,0.436094052142534,0.993943903390637,0.633152558322899,0,0.573673241497627,0.709336764396714,0.560677600142307,1.06748995729705,0.49333509683432,0,0.134710672069688,0.163461903113459,1.05950199351452,0,0,0.312160076830321,0,0.448346041655403,0.352303495931295,1.13311061057692,0.98315564691574,0.816616685019573,0.982674538494144,0.309977343527296,0,0.247266929278557,0.910161361938026,2.15585442544872,1.0100166837244,0.625592599359821,0.277064115484183,0.438977620880838,0.612975591598039,0,0.340296549480063,0.179389635688862,0.85422955527427,0,0,0.206105058476878,0,0.37223371266318,1.0126579934476,0.0974370051611986,0.252433774244115,0.368199594569197,0.161646056818812,0,0.10075209822764,1.01736355386293,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0,0.310983165046111,0,0,1.56449532329816,2.57296375277154,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.241011029883482,0.441175890929576,0.217879444092406,0.237270619111097,0.539325232640658,0.196221465125346,0,0,0,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0.329250856225877,0,0.502644862058154,0.462942225792648,1.3032332212413,1.03993478527958,1.44331342025273,0.115930404975077,0.234817388471643,0.433099343283221,0.925971025153221,0.570762456703795,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0.144119953416961,0.12624243342638,0.761974731506028,0.381988425558278,0,3.4214489204541,0.102827492703324,0,0.285826432630578,0.448524337381443,0.43596006883328,0.8800594298514,0.129271715757778,0,0.845302752556,0.531876233169741,1.04007436911366,0.257207374262142,0,0.532844358032199,0,1.08524321078289,0,0.325736184293735,0,0.791951872933429,0.904318131178758,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.868687840005475,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,0,0.315404830067869,0.702848489956279,0.601892199455438,0,2.0694614258501,0,0.553107505625109,0.781952530212746,0.783204629850962,0.343143423810856,0,0,0,0,3.32870879020994,1.81434175997808,0.744323423456331,0.306923946576125,0.280660094433074,1.15325234330131,0.511707249066704,0.482561763430822,1.48418066444991,0.462629081407967,1.24293207719189,1.14978018419333,0,0.232420756919918,0,0,0,1.14814448164607,0.546273504020151,0.393373244878272,0,0.15403067420883,1.56869953835371,0,0.105551628892876,0,0.510281115829547,0.215915916102139,0,2.16757150035082,3.01013864312912,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0.650060246036521,1.6068392984416,0.290012154876366,0.616194468458578,0.921022048356777,1.10269257987624,0.644521469209642,0.435050081742686,0.255679882248303,0.712256285173899,0.330569830721956,0.384380134730212,0.127612712494584,0.2023155617111,0.464845549297286,0.31481234683064,1.3940745403212,0.616067160352178,0,0,0.9266210955196,0,1.48863347743867,0.949138274156178,0.571890581771475,1.27948895655667,0.42793898803392,0.95460974377781,1.56989728039846,0.539617372749944,0.274537029736055,0.706874414074119,1.01091240786658,0,0.421258456238981,1.46290121726877,0.243713489631284,1.05650146756755,0.409499734223957,0.282810863907425,0,0,1.32687795048244,0.876901770507525,0,0,1.82619339266434,0.6196469961995,0.281695602532241,0.573645408816206,0.392996164052485,0.35667105148125,0.709522128141196,0,0,0.75894634753143,2.44954304171488,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0.293016358543788,0,0,0.284136146806413,0.47748896947538,0,0.614321404198464,0,0,0,0.329607748453519,0,0.398495976502139,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0.227586896570999,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.552896299656123,0,0.438770794307945,0.32681539055697,0,0.153900517007594,0.113942055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| ||
|short_description=p7@PRKCDBP | |short_description=p7@PRKCDBP | ||
}} | }} |
Latest revision as of 23:43, 18 September 2015
Short description: | p7@PRKCDBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PRKCDBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 232bp_to_ENST00000532354_5end |
EntrezGene: | PRKCDBP |
HGNC: | 9400 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 6.48e-08 | 2 |
kidney interstitial cell | 6.48e-08 | 2 |
juxtaglomerular complex cell | 6.48e-08 | 2 |
renal interstitial pericyte | 6.48e-08 | 2 |
extraglomerular mesangial cell | 6.48e-08 | 2 |
keratocyte | 9.61e-07 | 2 |
migratory cranial neural crest cell | 9.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma | 5.79e-13 | 4 |
anterior segment of eyeball | 1.02e-09 | 14 |
extraembryonic structure | 3.35e-09 | 24 |
abdomen connective tissue | 6.48e-08 | 2 |
abdominal segment connective tissue | 6.48e-08 | 2 |
trunk connective tissue | 6.48e-08 | 2 |
interstitial tissue | 6.48e-08 | 2 |
extraglomerular mesangium | 6.48e-08 | 2 |
kidney interstitium | 6.48e-08 | 2 |
juxtaglomerular apparatus | 6.48e-08 | 2 |
mesangium | 6.48e-08 | 2 |
umbilical cord | 8.20e-08 | 10 |
blastocyst | 8.20e-08 | 10 |
blastula | 8.20e-08 | 10 |
bilaminar disc | 8.20e-08 | 10 |
inner cell mass | 8.20e-08 | 10 |
cleaving embryo | 8.20e-08 | 10 |
connecting stalk | 8.20e-08 | 10 |
inner cell mass derived epiblast | 8.20e-08 | 10 |
extraembryonic mesoderm | 8.20e-08 | 10 |
cardiovascular system | 3.07e-07 | 109 |
vasculature | 3.26e-07 | 78 |
vascular system | 3.26e-07 | 78 |
circulatory system | 6.41e-07 | 112 |
vasculature of organ | 9.36e-07 | 11 |
head connective tissue | 9.61e-07 | 2 |
substantia propria of cornea | 9.61e-07 | 2 |