FFCP PHASE1:Hg19::chr17:1928587..1928602,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=146760 | |EntrezGene=146760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21329 | |HGNC=21329 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UN2 | |UniProt=Q86UN2 | ||
|association_with_transcript=-409bp_to_ENST00000331238,NM_178568,uc002ftp.2_5end | |association_with_transcript=-409bp_to_ENST00000331238,NM_178568,uc002ftp.2_5end | ||
|cluster_id=chr17:1928587..1928602,- | |||
|coexpression_cluster_id=C3611 | |||
|description=CAGE_peak_2_at_RTN4RL1_5end | |description=CAGE_peak_2_at_RTN4RL1_5end | ||
|id=chr17:1928587..1928602,- | |id=chr17:1928587..1928602,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000148;7.49e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.25e-07,10;CL:0000541,6.25e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.47e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.11e-07;4!DOID:1612;2.11e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.52e-07,4;DOID:1612,2.52e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.58e-29!115;UBERON:0001049!4.26e-25!57;UBERON:0005068!4.26e-25!57;UBERON:0006241!4.26e-25!57;UBERON:0007135!4.26e-25!57;UBERON:0001017!5.63e-24!82;UBERON:0005743!5.98e-23!86;UBERON:0000955!8.13e-23!69;UBERON:0006238!8.13e-23!69;UBERON:0003080!3.74e-22!42;UBERON:0002780!2.33e-21!41;UBERON:0001890!2.33e-21!41;UBERON:0006240!2.33e-21!41;UBERON:0002616!2.82e-20!59;UBERON:0000073!9.85e-20!94;UBERON:0001016!9.85e-20!94;UBERON:0003075!1.73e-18!86;UBERON:0007284!1.73e-18!86;UBERON:0002346!2.54e-18!90;UBERON:0002619!3.95e-18!22;UBERON:0001893!1.98e-17!34;UBERON:0001869!4.47e-17!32;UBERON:0002020!8.82e-17!34;UBERON:0003528!8.82e-17!34;UBERON:0001950!1.14e-16!20;UBERON:0002791!1.19e-16!33;UBERON:0000924!3.16e-15!173;UBERON:0006601!3.16e-15!173;UBERON:0004121!4.02e-15!169;UBERON:0003056!5.49e-15!61;UBERON:0000956!7.95e-15!25;UBERON:0000203!7.95e-15!25;UBERON:0000033!1.88e-14!123;UBERON:0000153!2.92e-14!129;UBERON:0007811!2.92e-14!129 | |ontology_enrichment_uberon=UBERON:0007023!7.58e-29!115;UBERON:0001049!4.26e-25!57;UBERON:0005068!4.26e-25!57;UBERON:0006241!4.26e-25!57;UBERON:0007135!4.26e-25!57;UBERON:0001017!5.63e-24!82;UBERON:0005743!5.98e-23!86;UBERON:0000955!8.13e-23!69;UBERON:0006238!8.13e-23!69;UBERON:0003080!3.74e-22!42;UBERON:0002780!2.33e-21!41;UBERON:0001890!2.33e-21!41;UBERON:0006240!2.33e-21!41;UBERON:0002616!2.82e-20!59;UBERON:0000073!9.85e-20!94;UBERON:0001016!9.85e-20!94;UBERON:0003075!1.73e-18!86;UBERON:0007284!1.73e-18!86;UBERON:0002346!2.54e-18!90;UBERON:0002619!3.95e-18!22;UBERON:0001893!1.98e-17!34;UBERON:0001869!4.47e-17!32;UBERON:0002020!8.82e-17!34;UBERON:0003528!8.82e-17!34;UBERON:0001950!1.14e-16!20;UBERON:0002791!1.19e-16!33;UBERON:0000924!3.16e-15!173;UBERON:0006601!3.16e-15!173;UBERON:0004121!4.02e-15!169;UBERON:0003056!5.49e-15!61;UBERON:0000956!7.95e-15!25;UBERON:0000203!7.95e-15!25;UBERON:0000033!1.88e-14!123;UBERON:0000153!2.92e-14!129;UBERON:0007811!2.92e-14!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.72e-32;22!UBERON:0001950;2.24e-29;20!UBERON:0000956;1.84e-27;25!UBERON:0000203;1.84e-27;25!UBERON:0001869;1.54e-23;32!UBERON:0002791;1.26e-21;32!UBERON:0001893;1.78e-21;34!UBERON:0003528;7.23e-20;34!UBERON:0002020;7.23e-20;34!UBERON:0002780;1.20e-18;41!UBERON:0001890;1.20e-18;41!UBERON:0000073;8.17e-14;53!UBERON:0002616;8.17e-14;53!UBERON:0000955;3.63e-11;68!UBERON:0000200;1.85e-10;6!UBERON:0001017;1.37e-09;75!UBERON:0001871;5.29e-09;6!UBERON:0001872;6.02e-09;5!UBERON:0002021;9.78e-09;5!UBERON:0000349;1.68e-08;5!UBERON:0001016;2.50e-08;83!UBERON:0003296;4.25e-07;4!UBERON:0010133;4.25e-07;4!UBERON:0004905;5.39e-07;8!UBERON:0000982;5.39e-07;8!UBERON:0004770;5.39e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.15e-32,22;UBERON:0001950,1.44e-29,20;UBERON:0000956,1.29e-27,25;UBERON:0000203,1.29e-27,25;UBERON:0002780,6.81e-27,41;UBERON:0001890,6.81e-27,41;UBERON:0003080,6.81e-27,41;UBERON:0006240,6.81e-27,41;UBERON:0001869,1.01e-26,32;UBERON:0001893,1.06e-24,34;UBERON:0002791,2.58e-24,32;UBERON:0001017,1.96e-23,81;UBERON:0000073,2.31e-23,53;UBERON:0002616,2.31e-23,53;UBERON:0001049,5.21e-23,56;UBERON:0005068,5.21e-23,56;UBERON:0006241,5.21e-23,56;UBERON:0007135,5.21e-23,56;UBERON:0003528,1.85e-22,34;UBERON:0002020,1.85e-22,34;UBERON:0000955,2.78e-21,68;UBERON:0006238,2.78e-21,68;UBERON:0001016,7.75e-20,89;UBERON:0003056,4.83e-19,61;UBERON:0007023,1.61e-17,114;UBERON:0010371,3.43e-17,104;UBERON:0003075,9.77e-17,82;UBERON:0007284,9.77e-17,82;UBERON:0002346,1.34e-16,86;UBERON:0004121,1.68e-14,171;UBERON:0000924,1.68e-14,171;UBERON:0006601,1.68e-14,171;UBERON:0000200,1.99e-10,6;UBERON:0011216,1.99e-09,223;UBERON:0001872,4.31e-09,5;UBERON:0001871,5.85e-09,6;UBERON:0002021,8.55e-09,5;UBERON:0000349,1.60e-08,5;UBERON:0010314,7.85e-08,132;UBERON:0003296,6.16e-07,4;UBERON:0010133,6.16e-07,4;UBERON:0004905,6.21e-07,8;UBERON:0000982,6.21e-07,8;UBERON:0004770,6.21e-07,8 | |||
|phase1_expression=0.181678379270557,1.92690471501885,0,0,1.34088328328186,0,0,0,2.61185628199839,0,0,0,0,1.23766352960047,4.63956326019082,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.641858054152187,0,0,0,0,0,0.56738522469114,0,0,0,0,1.21079900526674,0,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.650296737799391,0,0,0.289803085735052,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,1.80719576192283,1.00267582127178,2.60723734129483,0,0.486634870302636,0,0,0,1.0478326039817,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0.408308342509787,0.122834317311768,1.23990937410919,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0,0.515281080091258,0.37223371266318,0,0.194874010322397,0.504867548488229,0.368199594569197,0,1.42003837006646,1.41052937518696,0,0,0,0,0.121973706129595,0,0.232387885739037,1.24393266018445,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86261773342101,1.18157981336281,0,0.122988438543114,0,0.219500570817251,0,1.00528972411631,0.185176890317059,0,0,0,0,0,0,0,0,3.1608175918371,4.29243081047436,0,0,0,0,0,0,0.716468181622786,1.16253575405585,0.766765358330422,0,0,0,0.288239906833923,0.37872730027914,2.92090313743978,3.81988425558278,7.03304683260282,3.4214489204541,0.616964956219941,1.8020583470635,3.14409075893636,0.112131084345361,0,0,0,17.8828222925941,0,0,0,1.80045161983499,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0.215627574859517,0,0,0,1.54657762555539,1.17261385734044,3.18969375826582,0,0,0,3.18997878469764,7.00238729483548,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,7.44044398358414,1.37257369524342,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,1.83138929636687,0.907604499126468,0,1.95018073810956,0,0,0.770243085573222,0.767518373630648,0,0.214840489736547,0.290033387828457,0,0,0.330569830721956,0,0.255225424989168,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53329162357197,0.658589785919804,0,1.04980416073495,0.0962221127255121,0,0,0.847294206991012,0.43050537267123,0,2.21715076768338,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,7.1572127655407,0,0.735120647943095,0,0.721346064882224,0,1.27541018183058,0.199579371432817,0,0.635020748171649,0.324621940274555,0,2.05411211129873,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,2.61996756571508,2.4906390476222,0,0,0.284136146806413,0,0,0,6.95903353436409,3.23539657744179,0,0,0,0.597743964753209,0,3.02319297425131,0,0,0,0,0,0,0.295930216910801,0,0,4.84666373047609,3.9890282209596,9.98068990005971,9.63582716015363,3.14855999986305,5.07499702804355,0,0,0,1.03423011972439,0,0,0.885741385813839,0.723578631752448,6.10326945268333,1.43753037910592,1.18219047581419,4.16832254592548,0,1.81250867562184,0.461701551022782,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0.104421949505455,0.539209063845416,0,0.937057782901357,0.182454789215666,0,0.242780379534093,2.76209081994573,0,9.48825561054519,2.90658266291045,0,0.311064574191741,0.664653872707185,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.581934098930517,0.176512253383001,5.42353777873278,0,0,5.88790402389672,0,0,1.70762395791482,0.19980960958213,1.29681375438695,0,0,0,0,0,0.271808412147228,0,0.407992870545287,0.288950589901519,0,0.273810757783986,0,0,0,1.95497680890578,0.458320848023367,0.717873024576814,0.798716001995964,0,0.89268582976749,0.739018197353989,0,1.16495949527454,0,0,0,1.37798474120648,0,4.77137813885582,2.31545790389679,0,0,0,0.2249738915515,0.77380195455795,7.65444413891111,1.34173875039706,1.65491985328316,0.367182116944987,0,0,0,0,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0.113312091520126,1.46552233678082,0,0.129282956361551,0.79339561045614,0,0,0.533937062838473,0.78602152549833,0.828478110694391,0,0,0,0,4.35214242695579,1.2534494701135,2.14441903734423,1.96723578425883,0,4.43034089983493,5.61320818549031,5.50840095108599,0,0.443716206147409,0.807253238237985,0.138348634936231,0.124980407962107,2.12308764558307,0,0,0,4.0577888011031,0.149254802886874,0,0,0,1.25783950876288,5.33886732957922,0,0.302461847526478,0.310874401165561,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71635536432595,1.23520578864389,0,0.176689145945881,0,0,0,0.345430341731199,0,3.04168559533808,0.194860308839388,0,0,1.31043939538565,0,0,0,0,0,0,0,0.13987950771944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| ||
|short_description=p2@RTN4RL1 | |short_description=p2@RTN4RL1 | ||
}} | }} |
Latest revision as of 23:47, 18 September 2015
Short description: | p2@RTN4RL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RTN4RL1_5end |
Coexpression cluster: | C3611_Mesenchymal_brain_pineal_amygdala_tenocyte_occipital_breast |
Association with transcript: | -409bp_to_ENST00000331238, NM_178568, uc002ftp.2_5end |
EntrezGene: | RTN4RL1 |
HGNC: | 21329 |
UniProt: | Q86UN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.25e-07 | 10 |
melanoblast | 6.25e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.52e-07 | 4 |
breast cancer | 2.52e-07 | 4 |