FFCP PHASE1:Hg19::chr7:55086735..55086738,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1956 | |EntrezGene=1956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3236 | |HGNC=3236 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000420316_5end | |association_with_transcript=8bp_to_ENST00000420316_5end | ||
|cluster_id=chr7:55086735..55086738,+ | |||
|coexpression_cluster_id=C2899 | |||
|description=CAGE_peak_3_at_EGFR_5end | |description=CAGE_peak_3_at_EGFR_5end | ||
|id=chr7:55086735..55086738,+ | |id=chr7:55086735..55086738,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.03e-13!254;CL:0002076!2.66e-10!43;CL:0000223!3.15e-09!59;CL:0000220!5.25e-08!246;CL:0002321!1.27e-07!248;CL:0002368!2.80e-07!13 | |ontology_enrichment_celltype=CL:0000066!2.03e-13!254;CL:0002076!2.66e-10!43;CL:0000223!3.15e-09!59;CL:0000220!5.25e-08!246;CL:0002321!1.27e-07!248;CL:0002368!2.80e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.84e-09;42!CL:0002368;5.11e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.16e-20,253;CL:0002076,1.41e-10,42;CL:0000223,8.65e-10,58;CL:0000076,2.05e-09,63;CL:0002321,1.09e-07,250;CL:0002077,1.59e-07,34;CL:0002368,4.92e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.43e-07!14 | |ontology_enrichment_disease=DOID:1749!1.43e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;8.21e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.16e-11,14;DOID:305,3.64e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.24e-19!169;UBERON:0000925!1.24e-19!169;UBERON:0006595!1.24e-19!169;UBERON:0001007!3.82e-15!155;UBERON:0001555!3.82e-15!155;UBERON:0007026!3.82e-15!155;UBERON:0000481!8.24e-15!347;UBERON:0003104!4.97e-13!238;UBERON:0009142!4.97e-13!238;UBERON:0001004!4.54e-12!72;UBERON:0000475!5.94e-12!365;UBERON:0003102!1.17e-10!95;UBERON:0000077!2.92e-10!130;UBERON:0004921!1.42e-09!129;UBERON:0004185!1.42e-09!129;UBERON:0000467!2.07e-09!625;UBERON:0000480!3.11e-09!626;UBERON:0000468!1.30e-08!659;UBERON:0000165!2.18e-08!28;UBERON:0000930!2.18e-08!28;UBERON:0000161!2.31e-08!35;UBERON:0000064!3.25e-08!219;UBERON:0002050!3.28e-08!605;UBERON:0005423!3.28e-08!605;UBERON:0002100!3.84e-08!216;UBERON:0001048!4.18e-08!168;UBERON:0000923!4.60e-08!604;UBERON:0005291!4.60e-08!604;UBERON:0006598!4.60e-08!604;UBERON:0002532!4.60e-08!604;UBERON:0000065!5.79e-08!53;UBERON:0001041!6.17e-08!98;UBERON:0000922!8.11e-08!612;UBERON:0000062!8.49e-08!511;UBERON:0001444!3.38e-07!48;UBERON:0000166!4.79e-07!21 | |ontology_enrichment_uberon=UBERON:0004119!1.24e-19!169;UBERON:0000925!1.24e-19!169;UBERON:0006595!1.24e-19!169;UBERON:0001007!3.82e-15!155;UBERON:0001555!3.82e-15!155;UBERON:0007026!3.82e-15!155;UBERON:0000481!8.24e-15!347;UBERON:0003104!4.97e-13!238;UBERON:0009142!4.97e-13!238;UBERON:0001004!4.54e-12!72;UBERON:0000475!5.94e-12!365;UBERON:0003102!1.17e-10!95;UBERON:0000077!2.92e-10!130;UBERON:0004921!1.42e-09!129;UBERON:0004185!1.42e-09!129;UBERON:0000467!2.07e-09!625;UBERON:0000480!3.11e-09!626;UBERON:0000468!1.30e-08!659;UBERON:0000165!2.18e-08!28;UBERON:0000930!2.18e-08!28;UBERON:0000161!2.31e-08!35;UBERON:0000064!3.25e-08!219;UBERON:0002050!3.28e-08!605;UBERON:0005423!3.28e-08!605;UBERON:0002100!3.84e-08!216;UBERON:0001048!4.18e-08!168;UBERON:0000923!4.60e-08!604;UBERON:0005291!4.60e-08!604;UBERON:0006598!4.60e-08!604;UBERON:0002532!4.60e-08!604;UBERON:0000065!5.79e-08!53;UBERON:0001041!6.17e-08!98;UBERON:0000922!8.11e-08!612;UBERON:0000062!8.49e-08!511;UBERON:0001444!3.38e-07!48;UBERON:0000166!4.79e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0003729;2.01e-10;13!UBERON:0000486;2.70e-08;12!UBERON:0000344;4.39e-08;20!UBERON:0000165;6.51e-08;28!UBERON:0000065;2.44e-07;44!UBERON:0001004;7.50e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.36e-12,160;UBERON:0000925,2.36e-12,160;UBERON:0006595,2.36e-12,160;UBERON:0001004,6.79e-12,74;UBERON:0003729,4.09e-10,13;UBERON:0000033,3.48e-09,56;UBERON:0000153,1.08e-08,62;UBERON:0007811,1.08e-08,62;UBERON:0000065,2.54e-08,54;UBERON:0001007,4.14e-08,145;UBERON:0001555,4.14e-08,145;UBERON:0007026,4.14e-08,145;UBERON:0004923,6.00e-08,66;UBERON:0001444,6.86e-08,49;UBERON:0003102,7.29e-08,99;UBERON:0000344,7.61e-08,20;UBERON:0000165,3.23e-07,29;UBERON:0000930,3.23e-07,29 | |||
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| ||
|short_description=p3@EGFR | |short_description=p3@EGFR | ||
}} | }} |
Latest revision as of 00:48, 19 September 2015
Short description: | p3@EGFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EGFR_5end |
Coexpression cluster: | C2899_epidermoid_oral_cervical_Small_large_placenta_mucinous |
Association with transcript: | 8bp_to_ENST00000420316_5end |
EntrezGene: | EGFR |
HGNC: | 3236 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.16e-20 | 253 |
endo-epithelial cell | 1.41e-10 | 42 |
endodermal cell | 8.65e-10 | 58 |
squamous epithelial cell | 2.05e-09 | 63 |
embryonic cell | 1.09e-07 | 250 |
ecto-epithelial cell | 1.59e-07 | 34 |
respiratory epithelial cell | 4.92e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.36e-12 | 160 |
endoderm | 2.36e-12 | 160 |
presumptive endoderm | 2.36e-12 | 160 |
respiratory system | 6.79e-12 | 74 |
mouth mucosa | 4.09e-10 | 13 |
head | 3.48e-09 | 56 |
anterior region of body | 1.08e-08 | 62 |
craniocervical region | 1.08e-08 | 62 |
respiratory tract | 2.54e-08 | 54 |
digestive system | 4.14e-08 | 145 |
digestive tract | 4.14e-08 | 145 |
primitive gut | 4.14e-08 | 145 |
organ component layer | 6.00e-08 | 66 |
subdivision of head | 6.86e-08 | 49 |
surface structure | 7.29e-08 | 99 |
mucosa | 7.61e-08 | 20 |
mouth | 3.23e-07 | 29 |
stomodeum | 3.23e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.16e-11 | 14 |
carcinoma | 3.64e-07 | 106 |