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FFCP PHASE1:Hg19::chr12:53224364..53224373,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=338785
|EntrezGene=338785
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=28930
|HGNC=28930
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-118bp_to_ENST00000546453,uc001sba.2_5end
|association_with_transcript=-118bp_to_ENST00000546453,uc001sba.2_5end
|cluster_id=chr12:53224364..53224373,-
|coexpression_cluster_id=C166
|coexpression_cluster_id=C166
|description=CAGE_peak_2_at_KRT79_5end
|description=CAGE_peak_2_at_KRT79_5end
Line 9: Line 14:
|ontology_enrichment_celltype=CL:0000136!5.80e-14!15;CL:0000840!1.23e-13!5;CL:0001029!1.23e-13!5;CL:0002615!4.46e-12!3;CL:0000990!2.93e-09!8;CL:0000235!2.78e-08!10;CL:0000451!1.17e-07!10
|ontology_enrichment_celltype=CL:0000136!5.80e-14!15;CL:0000840!1.23e-13!5;CL:0001029!1.23e-13!5;CL:0002615!4.46e-12!3;CL:0000990!2.93e-09!8;CL:0000235!2.78e-08!10;CL:0000451!1.17e-07!10
|ontology_enrichment_celltype_v019=CL:0000840;6.91e-50;5!CL:0000990;1.31e-33;8!CL:0000451;1.12e-27;10!CL:0000235;5.13e-23;6!CL:0002617;1.27e-17;2
|ontology_enrichment_celltype_v019=CL:0000840;6.91e-50;5!CL:0000990;1.31e-33;8!CL:0000451;1.12e-27;10!CL:0000235;5.13e-23;6!CL:0002617;1.27e-17;2
|ontology_enrichment_celltype_v019_2=CL:0000840,7.51e-50,5;CL:0001029,7.51e-50,5;CL:0000990,1.39e-33,8;CL:0000451,1.17e-27,10;CL:0000235,4.86e-23,6;CL:0002617,1.27e-17,2;CL:0002194,3.05e-14,59;CL:0000576,3.05e-14,59;CL:0000040,3.05e-14,59;CL:0000559,3.05e-14,59;CL:0002009,8.45e-14,61;CL:0000839,8.32e-13,66;CL:0000557,1.26e-12,67;CL:0000766,8.59e-12,72;CL:0000763,4.95e-08,108;CL:0000049,4.95e-08,108;CL:0002087,1.44e-07,115;CL:0002031,2.87e-07,120
|ontology_enrichment_development_v019=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:5662!1.62e-09!1
|ontology_enrichment_disease=DOID:5662!1.62e-09!1
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002171!7.50e-10!1;UBERON:0006518!7.50e-10!1;UBERON:0008949!7.50e-10!1;UBERON:0000101!7.50e-10!1;UBERON:0002167!7.50e-10!1;UBERON:0000029!8.91e-10!1
|ontology_enrichment_uberon=UBERON:0002171!7.50e-10!1;UBERON:0006518!7.50e-10!1;UBERON:0008949!7.50e-10!1;UBERON:0000101!7.50e-10!1;UBERON:0002167!7.50e-10!1;UBERON:0000029!8.91e-10!1
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.34e-11,76;UBERON:0001474,2.00e-10,82;UBERON:0004765,1.52e-09,90;UBERON:0002405,2.97e-09,93;UBERON:0002390,8.34e-09,98;UBERON:0003061,8.34e-09,98;UBERON:0001434,1.22e-08,100;UBERON:0002193,4.95e-08,108
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|phase1_expression=0,1.07050261945492,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,3.24547393654683,2.43781632218974,3.19099105245276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,7.95614501473408,2.52672975890838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.828478110694391,0.496166021811951,0,0,0,0.544017803369474,0,0,0.983617892129413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p2@KRT79
|short_description=p2@KRT79
}}
}}

Latest revision as of 00:52, 19 September 2015

Short description:p2@KRT79
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_KRT79_5end
Coexpression cluster:C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung
Association with transcript: -118bp_to_ENST00000546453, uc001sba.2_5end
EntrezGene:KRT79
HGNC: 28930
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data