FFCP PHASE1:Hg19::chr19:48825121..48825168,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93233 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26560 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000497803,ENST00000504608_5end | |||
|cluster_id=chr19:48825121..48825168,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_CCDC114_5end | |||
|id=chr19:48825121..48825168,- | |||
|ontology_enrichment_celltype=CL:0000988!1.83e-18!182;CL:0000037!2.21e-17!172;CL:0000566!2.21e-17!172;CL:0000738!4.92e-16!140;CL:0002032!4.38e-15!165;CL:0000837!4.38e-15!165;CL:0002031!4.18e-13!124;CL:0002087!2.02e-12!119;CL:0000838!5.87e-09!52;CL:0000542!9.51e-09!53;CL:0000051!9.51e-09!53;CL:0000791!8.22e-08!18;CL:0000789!8.22e-08!18;CL:0002420!8.22e-08!18;CL:0002419!8.22e-08!18;CL:0000790!8.22e-08!18;CL:0000084!9.58e-08!25;CL:0000827!9.58e-08!25;CL:0000763!1.90e-07!112;CL:0000049!1.90e-07!112;CL:0000860!3.47e-07!45;CL:0002057!7.77e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.01e-13;18!CL:0000789;2.01e-13;18!CL:0002419;2.01e-13;18!CL:0000084;4.94e-10;25!CL:0000624;1.49e-08;6!CL:0000625;7.00e-08;11!CL:0000542;1.55e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.65e-18,136;CL:0000037,1.66e-18,168;CL:0000988,3.21e-18,177;CL:0002032,2.74e-16,161;CL:0000837,2.74e-16,161;CL:0002031,1.46e-14,120;CL:0000791,4.05e-14,18;CL:0000789,4.05e-14,18;CL:0002420,4.05e-14,18;CL:0002419,4.05e-14,18;CL:0000790,4.05e-14,18;CL:0002087,1.51e-13,115;CL:0000838,7.63e-13,52;CL:0000542,1.84e-12,53;CL:0000051,1.84e-12,53;CL:0000084,1.33e-10,25;CL:0000827,1.33e-10,25;CL:0000624,3.15e-09,6;CL:0000625,4.61e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.01e-13;18!CL:0000051;1.55e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.10e-15!57;UBERON:0005068!3.10e-15!57;UBERON:0006241!3.10e-15!57;UBERON:0007135!3.10e-15!57;UBERON:0002616!3.93e-12!59;UBERON:0002780!4.64e-12!41;UBERON:0001890!4.64e-12!41;UBERON:0006240!4.64e-12!41;UBERON:0003080!2.61e-11!42;UBERON:0002346!1.83e-10!90;UBERON:0003075!5.23e-10!86;UBERON:0007284!5.23e-10!86;UBERON:0000955!6.03e-10!69;UBERON:0006238!6.03e-10!69;UBERON:0005743!8.18e-10!86;UBERON:0001017!1.00e-09!82;UBERON:0002791!1.22e-09!33;UBERON:0002020!1.40e-09!34;UBERON:0003528!1.40e-09!34;UBERON:0002390!1.42e-09!102;UBERON:0003061!1.42e-09!102;UBERON:0001893!1.87e-09!34;UBERON:0001869!1.48e-08!32;UBERON:0003056!3.11e-08!61;UBERON:0002193!7.80e-08!112;UBERON:0000073!1.06e-07!94;UBERON:0001016!1.06e-07!94;UBERON:0002619!1.08e-07!22;UBERON:0000956!1.24e-07!25;UBERON:0000203!1.24e-07!25;UBERON:0002371!5.47e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.31e-13;53!UBERON:0002616;3.31e-13;53!UBERON:0002780;1.69e-11;41!UBERON:0001890;1.69e-11;41!UBERON:0002791;1.75e-10;32!UBERON:0003528;2.20e-10;34!UBERON:0002020;2.20e-10;34!UBERON:0001893;4.99e-10;34!UBERON:0001869;2.77e-09;32!UBERON:0002619;2.26e-08;22!UBERON:0000956;2.95e-08;25!UBERON:0000203;2.95e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.43e-20,56;UBERON:0005068,6.43e-20,56;UBERON:0006241,6.43e-20,56;UBERON:0007135,6.43e-20,56;UBERON:0000073,1.79e-18,53;UBERON:0002616,1.79e-18,53;UBERON:0002780,1.40e-14,41;UBERON:0001890,1.40e-14,41;UBERON:0003080,1.40e-14,41;UBERON:0006240,1.40e-14,41;UBERON:0001893,1.36e-12,34;UBERON:0003528,1.53e-12,34;UBERON:0002020,1.53e-12,34;UBERON:0002791,2.60e-12,32;UBERON:0000955,3.31e-12,68;UBERON:0006238,3.31e-12,68;UBERON:0001017,9.83e-12,81;UBERON:0003075,1.59e-11,82;UBERON:0007284,1.59e-11,82;UBERON:0001869,8.70e-11,32;UBERON:0002346,1.41e-10,86;UBERON:0001016,1.06e-09,89;UBERON:0002619,1.21e-08,22;UBERON:0010371,1.39e-08,104;UBERON:0003056,1.54e-08,61;UBERON:0000956,2.02e-08,25;UBERON:0000203,2.02e-08,25;UBERON:0007023,4.03e-08,114;UBERON:0002390,6.32e-07,98;UBERON:0003061,6.32e-07,98;UBERON:0001950,9.42e-07,20 | |||
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| |||
|short_description=p1@CCDC114 | |||
}} |
Latest revision as of 01:46, 19 September 2015
Short description: | p1@CCDC114 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC114_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000497803, ENST00000504608_5end |
EntrezGene: | CCDC114 |
HGNC: | 26560 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.65e-18 | 136 |
hematopoietic stem cell | 1.66e-18 | 168 |
hematopoietic cell | 3.21e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.74e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.74e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 1.46e-14 | 120 |
mature alpha-beta T cell | 4.05e-14 | 18 |
alpha-beta T cell | 4.05e-14 | 18 |
immature T cell | 4.05e-14 | 18 |
mature T cell | 4.05e-14 | 18 |
immature alpha-beta T cell | 4.05e-14 | 18 |
nongranular leukocyte | 1.51e-13 | 115 |
lymphoid lineage restricted progenitor cell | 7.63e-13 | 52 |
lymphocyte | 1.84e-12 | 53 |
common lymphoid progenitor | 1.84e-12 | 53 |
T cell | 1.33e-10 | 25 |
pro-T cell | 1.33e-10 | 25 |
CD4-positive, alpha-beta T cell | 3.15e-09 | 6 |
CD8-positive, alpha-beta T cell | 4.61e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
neural tube | 6.43e-20 | 56 |
neural rod | 6.43e-20 | 56 |
future spinal cord | 6.43e-20 | 56 |
neural keel | 6.43e-20 | 56 |
regional part of nervous system | 1.79e-18 | 53 |
regional part of brain | 1.79e-18 | 53 |
regional part of forebrain | 1.40e-14 | 41 |
forebrain | 1.40e-14 | 41 |
anterior neural tube | 1.40e-14 | 41 |
future forebrain | 1.40e-14 | 41 |
telencephalon | 1.36e-12 | 34 |
brain grey matter | 1.53e-12 | 34 |
gray matter | 1.53e-12 | 34 |
regional part of telencephalon | 2.60e-12 | 32 |
brain | 3.31e-12 | 68 |
future brain | 3.31e-12 | 68 |
central nervous system | 9.83e-12 | 81 |
neural plate | 1.59e-11 | 82 |
presumptive neural plate | 1.59e-11 | 82 |
cerebral hemisphere | 8.70e-11 | 32 |
neurectoderm | 1.41e-10 | 86 |
nervous system | 1.06e-09 | 89 |
regional part of cerebral cortex | 1.21e-08 | 22 |
ecto-epithelium | 1.39e-08 | 104 |
pre-chordal neural plate | 1.54e-08 | 61 |
cerebral cortex | 2.02e-08 | 25 |
pallium | 2.02e-08 | 25 |
adult organism | 4.03e-08 | 114 |
hematopoietic system | 6.32e-07 | 98 |
blood island | 6.32e-07 | 98 |
neocortex | 9.42e-07 | 20 |