FFCP PHASE1:Hg19::chr18:25757921..25757988,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1000 | |EntrezGene=1000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1759 | |HGNC=1759 | ||
|TSSclassifier=strong | |||
|UniProt=P19022 | |UniProt=P19022 | ||
|association_with_transcript=-476bp_to_NM_001792,uc002kwg.2_5end | |association_with_transcript=-476bp_to_NM_001792,uc002kwg.2_5end | ||
|cluster_id=chr18:25757921..25757988,- | |||
|description=CAGE_peak_3_at_CDH2_5end | |description=CAGE_peak_3_at_CDH2_5end | ||
|id=chr18:25757921..25757988,- | |id=chr18:25757921..25757988,- | ||
|ontology_enrichment_celltype=CL:0000359;4.47e-15;32!CL:0000192;1.50e-09;43!CL:0002494;2.78e-08;16!CL:0002334;1.60e-07;12!CL:0000393;5.12e-07;61!CL:0000211;5.12e-07;61!CL:0002539;7.61e-07;10!CL:0000187;8.09e-07;55 | |ontology_enrichment_celltype=CL:0000055!8.96e-23!180;CL:0000359!1.53e-15!32;CL:0000222!1.53e-14!119;CL:0000393!3.14e-13!60;CL:0000211!3.14e-13!60;CL:0000680!3.94e-13!57;CL:0000056!3.94e-13!57;CL:0000355!3.94e-13!57;CL:0000192!1.06e-12!42;CL:0000514!1.06e-12!42;CL:0000187!1.53e-12!54;CL:0000183!3.55e-12!59;CL:0000220!1.02e-09!246;CL:0002321!1.28e-09!248;CL:0000057!8.60e-08!75;CL:0002494!9.42e-08!16;CL:0002334!4.27e-07!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;4.47e-15;32!CL:0000192;1.50e-09;43!CL:0002494;2.78e-08;16!CL:0002334;1.60e-07;12!CL:0000393;5.12e-07;61!CL:0000211;5.12e-07;61!CL:0002539;7.61e-07;10!CL:0000187;8.09e-07;55 | ||
|ontology_enrichment_disease=DOID:2394;2.09e-07;14 | |ontology_enrichment_celltype_v019_2=CL:0000359,3.25e-16,32;CL:0000393,5.29e-13,61;CL:0000211,5.29e-13,61;CL:0000222,5.82e-13,121;CL:0000680,7.24e-13,58;CL:0000056,7.24e-13,58;CL:0000355,7.24e-13,58;CL:0000192,1.47e-12,43;CL:0000514,1.47e-12,43;CL:0000187,3.16e-12,55;CL:0002494,2.68e-08,16;CL:0002321,3.01e-08,250;CL:0002334,1.38e-07,12;CL:0000057,3.29e-07,76;CL:0002539,8.65e-07,10 | ||
|ontology_enrichment_uberon=UBERON:0001637;7.82e-14;42!UBERON:0003509;7.82e-14;42!UBERON:0004572;7.82e-14;42!UBERON:0004573;8.23e-14;33!UBERON:0004571;8.23e-14;33!UBERON:0007100;7.30e-13;25!UBERON:0000948;4.75e-11;22!UBERON:0000947;2.35e-08;21!UBERON:0010191;2.35e-08;21!UBERON:0007500;2.51e-08;56!UBERON:0001981;2.51e-08;56!UBERON:0004537;2.51e-08;56!UBERON:0003914;4.38e-07;74!UBERON:0001893;6.31e-07;34!UBERON:0004237;7.61e-07;10!UBERON:0004695;7.61e-07;10!UBERON:0002111;7.61e-07;10!UBERON:0004178;7.61e-07;10!UBERON:0003528;8.99e-07;34!UBERON:0002020;8.99e-07;34!UBERON:0001869;9.14e-07;32 | |ontology_enrichment_development_v019=CL:0000514;1.50e-09;43!CL:0000355;6.52e-07;58 | ||
|ontology_enrichment_disease=DOID:2394!8.87e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.09e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.19e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000025!1.24e-28!194;UBERON:0003914!1.13e-22!118;UBERON:0000483!3.65e-21!309;UBERON:0004872!4.27e-21!84;UBERON:0000477!4.78e-21!286;UBERON:0000119!5.52e-21!312;UBERON:0004111!5.01e-20!241;UBERON:0000475!1.79e-19!365;UBERON:0001637!1.20e-18!42;UBERON:0003509!1.20e-18!42;UBERON:0004572!1.20e-18!42;UBERON:0001981!1.93e-16!60;UBERON:0007500!1.93e-16!60;UBERON:0004537!1.93e-16!60;UBERON:0006965!1.93e-16!60;UBERON:0001009!1.12e-15!113;UBERON:0002049!3.32e-15!79;UBERON:0007798!3.32e-15!79;UBERON:0004573!1.01e-14!33;UBERON:0004571!1.01e-14!33;UBERON:0004535!2.29e-14!110;UBERON:0000055!4.76e-14!69;UBERON:0000468!6.16e-14!659;UBERON:0000481!2.95e-13!347;UBERON:0005743!4.80e-13!86;UBERON:0007100!5.62e-13!27;UBERON:0000073!1.01e-12!94;UBERON:0001016!1.01e-12!94;UBERON:0001017!2.19e-12!82;UBERON:0003075!5.72e-12!86;UBERON:0007284!5.72e-12!86;UBERON:0000467!5.91e-12!625;UBERON:0000480!9.81e-12!626;UBERON:0001134!1.37e-11!61;UBERON:0002036!1.37e-11!61;UBERON:0003082!1.37e-11!61;UBERON:0000948!2.58e-11!24;UBERON:0005498!2.58e-11!24;UBERON:0004140!2.58e-11!24;UBERON:0009881!2.58e-11!24;UBERON:0004141!2.58e-11!24;UBERON:0003084!2.58e-11!24;UBERON:0007005!2.58e-11!24;UBERON:0004139!2.58e-11!24;UBERON:0004291!2.58e-11!24;UBERON:0000490!3.75e-11!138;UBERON:0005256!4.10e-11!143;UBERON:0000955!7.82e-11!69;UBERON:0006238!7.82e-11!69;UBERON:0002385!1.76e-10!63;UBERON:0001015!1.76e-10!63;UBERON:0000383!1.76e-10!63;UBERON:0002346!3.49e-10!90;UBERON:0001049!3.45e-09!57;UBERON:0005068!3.45e-09!57;UBERON:0006241!3.45e-09!57;UBERON:0007135!3.45e-09!57;UBERON:0000914!3.92e-09!83;UBERON:0002329!3.92e-09!83;UBERON:0003077!3.92e-09!83;UBERON:0003059!3.92e-09!83;UBERON:0007282!3.92e-09!83;UBERON:0009618!3.92e-09!83;UBERON:0007285!3.92e-09!83;UBERON:0004290!7.21e-09!70;UBERON:0002616!1.17e-08!59;UBERON:0002100!1.68e-08!216;UBERON:0000947!2.56e-08!21;UBERON:0010191!2.56e-08!21;UBERON:0003056!2.94e-08!61;UBERON:0000922!3.95e-08!612;UBERON:0001893!6.53e-08!34;UBERON:0002780!8.04e-08!41;UBERON:0001890!8.04e-08!41;UBERON:0006240!8.04e-08!41;UBERON:0002020!1.08e-07!34;UBERON:0003528!1.08e-07!34;UBERON:0002791!1.33e-07!33;UBERON:0000033!1.50e-07!123;UBERON:0002050!1.64e-07!605;UBERON:0005423!1.64e-07!605;UBERON:0001869!1.73e-07!32;UBERON:0000923!1.88e-07!604;UBERON:0005291!1.88e-07!604;UBERON:0006598!1.88e-07!604;UBERON:0002532!1.88e-07!604;UBERON:0003103!2.01e-07!69;UBERON:0003080!2.72e-07!42;UBERON:0000486!4.17e-07!82;UBERON:0004121!6.56e-07!169;UBERON:0000153!9.27e-07!129;UBERON:0007811!9.27e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.82e-14;42!UBERON:0003509;7.82e-14;42!UBERON:0004572;7.82e-14;42!UBERON:0004573;8.23e-14;33!UBERON:0004571;8.23e-14;33!UBERON:0007100;7.30e-13;25!UBERON:0000948;4.75e-11;22!UBERON:0000947;2.35e-08;21!UBERON:0010191;2.35e-08;21!UBERON:0007500;2.51e-08;56!UBERON:0001981;2.51e-08;56!UBERON:0004537;2.51e-08;56!UBERON:0003914;4.38e-07;74!UBERON:0001893;6.31e-07;34!UBERON:0004237;7.61e-07;10!UBERON:0004695;7.61e-07;10!UBERON:0002111;7.61e-07;10!UBERON:0004178;7.61e-07;10!UBERON:0003528;8.99e-07;34!UBERON:0002020;8.99e-07;34!UBERON:0001869;9.14e-07;32 | |||
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| ||
|short_description=p3@CDH2 | |short_description=p3@CDH2 | ||
}} | }} |
Latest revision as of 03:27, 19 September 2015
Short description: | p3@CDH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDH2_5end |
Coexpression cluster: | NA |
Association with transcript: | -476bp_to_NM_001792, uc002kwg.2_5end |
EntrezGene: | CDH2 |
HGNC: | 1759 |
UniProt: | P19022 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.25e-16 | 32 |
electrically responsive cell | 5.29e-13 | 61 |
electrically active cell | 5.29e-13 | 61 |
mesodermal cell | 5.82e-13 | 121 |
muscle precursor cell | 7.24e-13 | 58 |
myoblast | 7.24e-13 | 58 |
multi-potent skeletal muscle stem cell | 7.24e-13 | 58 |
smooth muscle cell | 1.47e-12 | 43 |
smooth muscle myoblast | 1.47e-12 | 43 |
muscle cell | 3.16e-12 | 55 |
cardiocyte | 2.68e-08 | 16 |
embryonic cell | 3.01e-08 | 250 |
preadipocyte | 1.38e-07 | 12 |
fibroblast | 3.29e-07 | 76 |
aortic smooth muscle cell | 8.65e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.19e-07 | 14 |