FFCP PHASE2:Hg19::chr14:22362614..22362619,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene= |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:12149 |TSSclassifier=strong |UniProt= |ass...") |
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|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=12149 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 04:04, 19 September 2015
| Short description: | p1@TRAV8-4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_TRAV8-4_5end |
| Coexpression cluster: | C300_CD4_CD8_NK_Natural_blood_mycosis_Basophils |
| Association with transcript: | 1bp_to_ENST00000390438_5end |
| EntrezGene: | NA |
| HGNC: | 12149 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@TRAV8-4 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CD4-positive, alpha-beta thymocyte | 5.16e-21 | 1 |
| naive thymus-derived CD4-positive, alpha-beta T cell | 5.16e-21 | 1 |
| mature CD4 single-positive thymocyte | 5.16e-21 | 1 |
| resting double-positive thymocyte | 5.16e-21 | 1 |
| double-positive blast | 5.16e-21 | 1 |
| CD69-positive double-positive thymocyte | 5.16e-21 | 1 |
| CD69-positive, CD4-positive single-positive thymocyte | 5.16e-21 | 1 |
| CD4-positive, CD8-intermediate double-positive thymocyte | 5.16e-21 | 1 |
| CD24-positive, CD4 single-positive thymocyte | 5.16e-21 | 1 |
| thymocyte | 3.35e-11 | 2 |
Showing 1 to 10 of 19 entries
| Ontology term | p-value | n |
|---|---|---|
| thymus | 1.03e-44 | 4 |
| hemolymphoid system gland | 1.03e-44 | 4 |
| thymic region | 1.03e-44 | 4 |
| pharyngeal gland | 1.03e-44 | 4 |
| thymus primordium | 1.03e-44 | 4 |
| pharyngeal epithelium | 4.15e-30 | 6 |
| hemopoietic organ | 6.29e-26 | 7 |
| immune organ | 6.29e-26 | 7 |
| neck | 2.19e-18 | 10 |
| gland of gut | 2.19e-18 | 10 |
Showing 1 to 10 of 19 entries
