FFCP PHASE1:Hg19::chr17:26694801..26694812,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=645832 | |EntrezGene=645832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32942 | |HGNC=32942 | ||
|TSSclassifier=strong | |||
|UniProt=C9JDG5 | |UniProt=C9JDG5 | ||
|association_with_transcript=174bp_to_ENST00000438614_5end | |association_with_transcript=174bp_to_ENST00000438614_5end | ||
|cluster_id=chr17:26694801..26694812,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_5_at_SEBOX_5end | |description=CAGE_peak_5_at_SEBOX_5end | ||
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|ontology_enrichment_celltype=CL:0000181!6.37e-39!12;CL:0000417!6.37e-39!12;CL:0000668!6.37e-39!12;CL:0000414!6.37e-39!12;CL:0000412!6.37e-39!12;CL:0000182!6.37e-39!12;CL:0000223!4.60e-11!59;CL:0002563!1.92e-08!4 | |ontology_enrichment_celltype=CL:0000181!6.37e-39!12;CL:0000417!6.37e-39!12;CL:0000668!6.37e-39!12;CL:0000414!6.37e-39!12;CL:0000412!6.37e-39!12;CL:0000182!6.37e-39!12;CL:0000223!4.60e-11!59;CL:0002563!1.92e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.65e-33;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.65e-33;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.72e-33,12;CL:0000223,2.67e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.24e-21;11!UBERON:0009497;8.82e-18;13!UBERON:0001041;4.27e-08;30!UBERON:0003104;4.27e-08;31 | |ontology_enrichment_development_v019=UBERON:0004161;7.24e-21;11!UBERON:0009497;8.82e-18;13!UBERON:0001041;4.27e-08;30!UBERON:0003104;4.27e-08;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@SEBOX | |short_description=p5@SEBOX | ||
}} | }} |
Latest revision as of 05:22, 19 September 2015
Short description: | p5@SEBOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SEBOX_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 174bp_to_ENST00000438614_5end |
EntrezGene: | SEBOX |
HGNC: | 32942 |
UniProt: | C9JDG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.72e-33 | 12 |
endodermal cell | 2.67e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 6.99e-47 | 19 |
digestive gland | 6.99e-47 | 19 |
liver bud | 6.99e-47 | 19 |
hepatic diverticulum | 1.52e-40 | 22 |
liver primordium | 1.52e-40 | 22 |
digestive tract diverticulum | 8.47e-39 | 23 |
epithelial sac | 1.00e-35 | 25 |
epithelium of foregut-midgut junction | 1.00e-35 | 25 |
anatomical boundary | 1.00e-35 | 25 |
hepatobiliary system | 1.00e-35 | 25 |
foregut-midgut junction | 1.00e-35 | 25 |
septum transversum | 1.00e-35 | 25 |
sac | 2.30e-34 | 26 |
exocrine gland | 7.10e-29 | 31 |
exocrine system | 7.10e-29 | 31 |
endocrine gland | 1.31e-25 | 35 |
endocrine system | 5.65e-20 | 45 |
gut epithelium | 1.11e-16 | 54 |
abdomen element | 1.11e-16 | 54 |
abdominal segment element | 1.11e-16 | 54 |
gland | 2.79e-15 | 59 |
abdominal segment of trunk | 4.99e-15 | 60 |
abdomen | 4.99e-15 | 60 |
endo-epithelium | 4.99e-11 | 82 |
foregut | 2.13e-10 | 87 |
trunk region element | 5.79e-09 | 101 |
subdivision of trunk | 4.38e-08 | 112 |
epithelial tube | 9.71e-08 | 117 |
subdivision of digestive tract | 1.31e-07 | 118 |
trunk mesenchyme | 2.02e-07 | 122 |