FFCP PHASE1:Hg19::chr15:77908039..77908050,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84894 | |EntrezGene=84894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21205 | |HGNC=21205 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FE5 | |UniProt=Q96FE5 | ||
|association_with_transcript=69bp_to_AL834260_5end | |association_with_transcript=69bp_to_AL834260_5end | ||
|cluster_id=chr15:77908039..77908050,- | |||
|coexpression_cluster_id=C837 | |coexpression_cluster_id=C837 | ||
|description=CAGE_peak_14_at_LINGO1_5end | |description=CAGE_peak_14_at_LINGO1_5end | ||
|id=chr15:77908039..77908050,- | |id=chr15:77908039..77908050,- | ||
|ontology_enrichment_celltype=CL:0000540!1.80e-09!6;CL:0000031!1.80e-09!6;CL:0000404!1.80e-09!6;CL:0000148!2.70e-07!10;CL:0000541!2.70e-07!10;CL:0002322!3.14e-07!5;CL:0000047!5.49e-07!8 | |ontology_enrichment_celltype=CL:0000540!1.80e-09!6;CL:0000031!1.80e-09!6;CL:0000404!1.80e-09!6;CL:0000148!2.70e-07!10;CL:0000541!2.70e-07!10;CL:0002322!3.14e-07!5;CL:0000047!5.49e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000222;2.32e-12;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;1.30e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.16e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.11e-48!34;UBERON:0001017!2.05e-47!82;UBERON:0005743!9.96e-47!86;UBERON:0001049!1.18e-46!57;UBERON:0005068!1.18e-46!57;UBERON:0006241!1.18e-46!57;UBERON:0007135!1.18e-46!57;UBERON:0002791!1.47e-46!33;UBERON:0002619!9.03e-46!22;UBERON:0001869!1.90e-45!32;UBERON:0002020!2.81e-45!34;UBERON:0003528!2.81e-45!34;UBERON:0002780!4.98e-45!41;UBERON:0001890!4.98e-45!41;UBERON:0006240!4.98e-45!41;UBERON:0003080!9.35e-44!42;UBERON:0000073!3.40e-43!94;UBERON:0001016!3.40e-43!94;UBERON:0002616!3.19e-42!59;UBERON:0001950!1.19e-41!20;UBERON:0000955!8.04e-41!69;UBERON:0006238!8.04e-41!69;UBERON:0002346!1.94e-40!90;UBERON:0000956!1.12e-39!25;UBERON:0000203!1.12e-39!25;UBERON:0003075!4.12e-34!86;UBERON:0007284!4.12e-34!86;UBERON:0003056!2.63e-31!61;UBERON:0007023!1.55e-25!115;UBERON:0000924!1.78e-24!173;UBERON:0006601!1.78e-24!173;UBERON:0000033!8.77e-22!123;UBERON:0000153!1.96e-21!129;UBERON:0007811!1.96e-21!129;UBERON:0004121!2.31e-20!169;UBERON:0001871!9.17e-15!7;UBERON:0000200!1.32e-14!6;UBERON:0002021!1.36e-12!5;UBERON:0001872!7.76e-12!5;UBERON:0000349!8.12e-12!5;UBERON:0002420!3.97e-11!9;UBERON:0007245!3.97e-11!9;UBERON:0010009!3.97e-11!9;UBERON:0010011!3.97e-11!9;UBERON:0000454!3.97e-11!9;UBERON:0002298!8.35e-09!8;UBERON:0000025!2.43e-08!194;UBERON:0002771!3.94e-08!3;UBERON:0002308!8.13e-08!9;UBERON:0000125!8.13e-08!9;UBERON:0009663!3.18e-07!7;UBERON:0001896!5.18e-07!3;UBERON:0005290!5.18e-07!3;UBERON:0010096!5.18e-07!3 | |ontology_enrichment_uberon=UBERON:0001893!1.11e-48!34;UBERON:0001017!2.05e-47!82;UBERON:0005743!9.96e-47!86;UBERON:0001049!1.18e-46!57;UBERON:0005068!1.18e-46!57;UBERON:0006241!1.18e-46!57;UBERON:0007135!1.18e-46!57;UBERON:0002791!1.47e-46!33;UBERON:0002619!9.03e-46!22;UBERON:0001869!1.90e-45!32;UBERON:0002020!2.81e-45!34;UBERON:0003528!2.81e-45!34;UBERON:0002780!4.98e-45!41;UBERON:0001890!4.98e-45!41;UBERON:0006240!4.98e-45!41;UBERON:0003080!9.35e-44!42;UBERON:0000073!3.40e-43!94;UBERON:0001016!3.40e-43!94;UBERON:0002616!3.19e-42!59;UBERON:0001950!1.19e-41!20;UBERON:0000955!8.04e-41!69;UBERON:0006238!8.04e-41!69;UBERON:0002346!1.94e-40!90;UBERON:0000956!1.12e-39!25;UBERON:0000203!1.12e-39!25;UBERON:0003075!4.12e-34!86;UBERON:0007284!4.12e-34!86;UBERON:0003056!2.63e-31!61;UBERON:0007023!1.55e-25!115;UBERON:0000924!1.78e-24!173;UBERON:0006601!1.78e-24!173;UBERON:0000033!8.77e-22!123;UBERON:0000153!1.96e-21!129;UBERON:0007811!1.96e-21!129;UBERON:0004121!2.31e-20!169;UBERON:0001871!9.17e-15!7;UBERON:0000200!1.32e-14!6;UBERON:0002021!1.36e-12!5;UBERON:0001872!7.76e-12!5;UBERON:0000349!8.12e-12!5;UBERON:0002420!3.97e-11!9;UBERON:0007245!3.97e-11!9;UBERON:0010009!3.97e-11!9;UBERON:0010011!3.97e-11!9;UBERON:0000454!3.97e-11!9;UBERON:0002298!8.35e-09!8;UBERON:0000025!2.43e-08!194;UBERON:0002771!3.94e-08!3;UBERON:0002308!8.13e-08!9;UBERON:0000125!8.13e-08!9;UBERON:0009663!3.18e-07!7;UBERON:0001896!5.18e-07!3;UBERON:0005290!5.18e-07!3;UBERON:0010096!5.18e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.17e-41;20!UBERON:0001871;9.88e-40;6!UBERON:0002619;5.89e-38;22!UBERON:0000956;1.82e-33;25!UBERON:0000203;1.82e-33;25!UBERON:0002346;1.35e-25;4!UBERON:0000923;1.35e-25;4!UBERON:0010316;1.35e-25;4!UBERON:0005291;1.35e-25;4!UBERON:0003528;1.37e-23;34!UBERON:0002020;1.37e-23;34!UBERON:0002791;1.55e-23;32!UBERON:0001869;1.55e-23;32!UBERON:0002771;1.87e-23;2!UBERON:0001893;5.90e-22;34!UBERON:0002050;1.29e-20;5!UBERON:0005423;1.29e-20;5!UBERON:0000200;1.52e-17;6!UBERON:0002780;2.53e-15;41!UBERON:0001890;2.53e-15;41!UBERON:0000073;1.97e-13;53!UBERON:0002616;1.97e-13;53!UBERON:0000955;8.56e-10;68!UBERON:0002021;9.27e-10;5!UBERON:0000922;1.09e-09;49!UBERON:0001017;1.64e-07;75!UBERON:0002702;5.26e-07;2!UBERON:0001876;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.68e-41,20;UBERON:0001871,2.12e-39,6;UBERON:0002619,8.21e-38,22;UBERON:0000956,2.43e-33,25;UBERON:0000203,2.43e-33,25;UBERON:0002791,4.63e-26,32;UBERON:0001869,4.63e-26,32;UBERON:0003528,1.63e-24,34;UBERON:0002020,1.63e-24,34;UBERON:0001893,1.63e-24,34;UBERON:0002771,3.12e-23,2;UBERON:0002780,2.95e-20,41;UBERON:0001890,2.95e-20,41;UBERON:0003080,2.95e-20,41;UBERON:0006240,2.95e-20,41;UBERON:0002346,1.08e-19,86;UBERON:0000073,3.79e-19,53;UBERON:0002616,3.79e-19,53;UBERON:0001049,4.50e-18,56;UBERON:0005068,4.50e-18,56;UBERON:0006241,4.50e-18,56;UBERON:0007135,4.50e-18,56;UBERON:0000200,2.01e-17,6;UBERON:0001017,1.22e-14,81;UBERON:0000955,1.78e-14,68;UBERON:0006238,1.78e-14,68;UBERON:0003056,2.24e-13,61;UBERON:0001016,4.65e-13,89;UBERON:0003075,5.29e-12,82;UBERON:0007284,5.29e-12,82;UBERON:0004121,1.56e-10,171;UBERON:0000924,1.56e-10,171;UBERON:0006601,1.56e-10,171;UBERON:0002021,6.51e-10,5;UBERON:0010371,3.31e-09,104;UBERON:0002702,5.41e-07,2;UBERON:0010314,5.58e-07,132;UBERON:0001876,7.61e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.662648841607426,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.26602474769461,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0,0,0,0,0,0,0.583209226766509,0.173624994933292,0,0.241192877250816,0,0.442317039724898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,3.36680037793539,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0.160753148465019,0.550157746388935,0.415440338029185,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,4.02686674176478,0.3755727921195,1.14681839138014,0.110929051536852,0.124192805882767,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0.33946505990805,2.97604888142356,1.73510069962603,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0.798169295285756,0.82046545696302,1.76450187355203,0.760729777106397,0.807378228159255,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.87798860003913,0.781078098613847,0.620060389503552,0.253663240775627,1.09394961803644,0,0,1.23109871051734,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.526182188502793,0,0,0,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19370465096821,0,0,0.109940516745429,0,0,0.218559560503957,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,1.01987235286372,1.74540276136151,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0.18378979906969,0.250707539292375,0,0,0,0.20686599172379,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.662648841607426,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.26602474769461,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0,0,0,0,0,0,0.583209226766509,0.173624994933292,0,0.241192877250816,0,0.442317039724898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,3.36680037793539,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0.160753148465019,0.550157746388935,0.415440338029185,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,4.02686674176478,0.3755727921195,1.14681839138014,0.110929051536852,0.124192805882767,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0.33946505990805,2.97604888142356,1.73510069962603,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0.798169295285756,0.82046545696302,1.76450187355203,0.760729777106397,0.807378228159255,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.87798860003913,0.781078098613847,0.620060389503552,0.253663240775627,1.09394961803644,0,0,1.23109871051734,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.526182188502793,0,0,0,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19370465096821,0,0,0.109940516745429,0,0,0.218559560503957,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,1.01987235286372,1.74540276136151,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0.18378979906969,0.250707539292375,0,0,0,0.20686599172379,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p14@LINGO1 | |short_description=p14@LINGO1 | ||
}} | }} |
Latest revision as of 05:43, 19 September 2015
Short description: | p14@LINGO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_LINGO1_5end |
Coexpression cluster: | C837_neuroectodermal_duodenum_temporal_occipital_medial_carcinoid_parietal |
Association with transcript: | 69bp_to_AL834260_5end |
EntrezGene: | LINGO1 |
HGNC: | 21205 |
UniProt: | Q96FE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.16e-10 | 10 |