FFCP PHASE1:Hg19::chr14:22946686..22946714,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12090 | |HGNC=12090 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000390481_5end | |association_with_transcript=0bp_to_ENST00000390481_5end | ||
|cluster_id=chr14:22946686..22946714,+ | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_1_at_TRAJ58_5end | |description=CAGE_peak_1_at_TRAJ58_5end | ||
|id=chr14:22946686..22946714,+ | |id=chr14:22946686..22946714,+ | ||
|ontology_enrichment_celltype=CL:0000542!8.95e-24!53;CL:0000051!8.95e-24!53;CL:0000838!2.47e-21!52;CL:0000791!5.34e-17!18;CL:0000789!5.34e-17!18;CL:0002420!5.34e-17!18;CL:0002419!5.34e-17!18;CL:0000790!5.34e-17!18;CL:0000842!7.48e-15!3;CL:0000945!3.24e-12!24;CL:0000826!3.24e-12!24;CL:0002087!3.86e-12!119;CL:0000084!7.05e-12!25;CL:0000827!7.05e-12!25;CL:0000893!1.14e-11!2;CL:0002489!1.14e-11!2;CL:0000809!1.14e-11!2;CL:0000808!1.14e-11!2;CL:0000894!1.14e-11!2;CL:0000806!1.14e-11!2;CL:0000807!1.14e-11!2;CL:0000805!1.14e-11!2;CL:0002425!1.14e-11!2;CL:0000625!2.27e-11!11;CL:0000224!2.85e-11!4;CL:0000738!7.85e-11!140;CL:0000037!5.52e-08!172;CL:0000566!5.52e-08!172;CL:0002031!7.70e-08!124;CL:0000080!1.14e-07!6;CL:0000988!2.64e-07!182;CL:0002127!9.91e-07!1;CL:0000914!9.91e-07!1;CL:0000911!9.91e-07!1;CL:0000814!9.91e-07!1;CL:0002042!9.91e-07!1;CL:0002039!9.91e-07!1;CL:0002040!9.91e-07!1;CL:0002041!9.91e-07!1 | |ontology_enrichment_celltype=CL:0000542!8.95e-24!53;CL:0000051!8.95e-24!53;CL:0000838!2.47e-21!52;CL:0000791!5.34e-17!18;CL:0000789!5.34e-17!18;CL:0002420!5.34e-17!18;CL:0002419!5.34e-17!18;CL:0000790!5.34e-17!18;CL:0000842!7.48e-15!3;CL:0000945!3.24e-12!24;CL:0000826!3.24e-12!24;CL:0002087!3.86e-12!119;CL:0000084!7.05e-12!25;CL:0000827!7.05e-12!25;CL:0000893!1.14e-11!2;CL:0002489!1.14e-11!2;CL:0000809!1.14e-11!2;CL:0000808!1.14e-11!2;CL:0000894!1.14e-11!2;CL:0000806!1.14e-11!2;CL:0000807!1.14e-11!2;CL:0000805!1.14e-11!2;CL:0002425!1.14e-11!2;CL:0000625!2.27e-11!11;CL:0000224!2.85e-11!4;CL:0000738!7.85e-11!140;CL:0000037!5.52e-08!172;CL:0000566!5.52e-08!172;CL:0002031!7.70e-08!124;CL:0000080!1.14e-07!6;CL:0000988!2.64e-07!182;CL:0002127!9.91e-07!1;CL:0000914!9.91e-07!1;CL:0000911!9.91e-07!1;CL:0000814!9.91e-07!1;CL:0002042!9.91e-07!1;CL:0002039!9.91e-07!1;CL:0002040!9.91e-07!1;CL:0002041!9.91e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.46e-50;1!CL:0000911;1.46e-50;1!CL:0000814;1.46e-50;1!CL:0000946;3.99e-50;1!CL:0000786;3.99e-50;1!CL:0000791;4.31e-12;18!CL:0000789;4.31e-12;18!CL:0002419;4.31e-12;18!CL:0000084;5.27e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.46e-50,1;CL:0000914,1.46e-50,1;CL:0000911,1.46e-50,1;CL:0000814,1.46e-50,1;CL:0002042,1.46e-50,1;CL:0002039,1.46e-50,1;CL:0002040,1.46e-50,1;CL:0002041,1.46e-50,1;CL:0000946,2.42e-50,1;CL:0000786,2.42e-50,1;CL:0000980,2.42e-50,1;CL:0000893,4.32e-26,2;CL:0002489,4.32e-26,2;CL:0000809,4.32e-26,2;CL:0000808,4.32e-26,2;CL:0000894,4.32e-26,2;CL:0000806,4.32e-26,2;CL:0000807,4.32e-26,2;CL:0000805,4.32e-26,2;CL:0002425,4.32e-26,2;CL:0000785,5.56e-26,2;CL:0000955,5.56e-26,2;CL:0000818,5.56e-26,2;CL:0000954,5.56e-26,2;CL:0000816,5.56e-26,2;CL:0000817,8.00e-18,3;CL:0000791,4.31e-12,18;CL:0000789,4.31e-12,18;CL:0002420,4.31e-12,18;CL:0002419,4.31e-12,18;CL:0000790,4.31e-12,18;CL:0000838,1.73e-09,52;CL:0000542,2.52e-09,53;CL:0000051,2.52e-09,53;CL:0000084,5.27e-09,25;CL:0000827,5.27e-09,25 | |||
|ontology_enrichment_development_v019=CL:0002425;4.32e-26;2!CL:0000954;7.14e-26;2!CL:0000790;4.31e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.72e-21!4;UBERON:0005058!2.72e-21!4;UBERON:0009113!2.72e-21!4;UBERON:0003295!2.72e-21!4;UBERON:0005562!2.72e-21!4;UBERON:0004177!2.84e-18!7;UBERON:0003351!3.09e-14!6;UBERON:0001042!1.34e-12!10;UBERON:0009145!1.34e-12!10;UBERON:0006562!1.99e-11!11;UBERON:0000974!1.46e-08!10;UBERON:0003408!1.46e-08!10;UBERON:0009722!8.72e-08!11;UBERON:0007690!8.72e-08!11 | |ontology_enrichment_uberon=UBERON:0002370!2.72e-21!4;UBERON:0005058!2.72e-21!4;UBERON:0009113!2.72e-21!4;UBERON:0003295!2.72e-21!4;UBERON:0005562!2.72e-21!4;UBERON:0004177!2.84e-18!7;UBERON:0003351!3.09e-14!6;UBERON:0001042!1.34e-12!10;UBERON:0009145!1.34e-12!10;UBERON:0006562!1.99e-11!11;UBERON:0000974!1.46e-08!10;UBERON:0003408!1.46e-08!10;UBERON:0009722!8.72e-08!11;UBERON:0007690!8.72e-08!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.14e-26;2!UBERON:0005058;7.14e-26;2!UBERON:0009113;7.14e-26;2!UBERON:0004177;3.26e-11;5!UBERON:0005057;3.26e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.14e-50,4;UBERON:0005058,5.14e-50,4;UBERON:0009113,5.14e-50,4;UBERON:0003295,5.14e-50,4;UBERON:0005562,5.14e-50,4;UBERON:0003351,8.35e-34,6;UBERON:0004177,3.65e-29,7;UBERON:0005057,3.65e-29,7;UBERON:0000974,8.54e-21,10;UBERON:0003408,8.54e-21,10;UBERON:0001042,8.54e-21,10;UBERON:0009145,8.54e-21,10;UBERON:0006562,5.14e-19,11;UBERON:0009722,5.14e-19,11;UBERON:0007690,5.14e-19,11;UBERON:0008814,4.55e-12,18;UBERON:0001557,1.72e-11,19;UBERON:0004807,3.92e-08,28;UBERON:0000077,6.91e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.57470412614962,0.550975469195755,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.668745981562712,0,0,0,0.334231370655521,0,0.221533894583621,0,0,0.260118695119756,0.328875809207352,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0.453237370790265,0.766440987203842,0.34362744548263,0.506039384039006,0.637130828648193,0,0,0.301150238155546,0.127986611154418,1.24930726552346,0.947109008176067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14715032776051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38280785066935,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22718928688412,0.496597714366863,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.57470412614962,0.550975469195755,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.668745981562712,0,0,0,0.334231370655521,0,0.221533894583621,0,0,0.260118695119756,0.328875809207352,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0.453237370790265,0.766440987203842,0.34362744548263,0.506039384039006,0.637130828648193,0,0,0.301150238155546,0.127986611154418,1.24930726552346,0.947109008176067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14715032776051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38280785066935,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22718928688412,0.496597714366863,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@TRAJ58 | |short_description=p1@TRAJ58 | ||
}} | }} |
Latest revision as of 05:47, 19 September 2015
Short description: | p1@TRAJ58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRAJ58_5end |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | 0bp_to_ENST00000390481_5end |
EntrezGene: | NA |
HGNC: | 12090 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.14e-50 | 4 |
hemolymphoid system gland | 5.14e-50 | 4 |
thymic region | 5.14e-50 | 4 |
pharyngeal gland | 5.14e-50 | 4 |
thymus primordium | 5.14e-50 | 4 |
pharyngeal epithelium | 8.35e-34 | 6 |
hemopoietic organ | 3.65e-29 | 7 |
immune organ | 3.65e-29 | 7 |
neck | 8.54e-21 | 10 |
gland of gut | 8.54e-21 | 10 |
chordate pharynx | 8.54e-21 | 10 |
pharyngeal region of foregut | 8.54e-21 | 10 |
pharynx | 5.14e-19 | 11 |
entire pharyngeal arch endoderm | 5.14e-19 | 11 |
early pharyngeal endoderm | 5.14e-19 | 11 |
pharyngeal arch system | 4.55e-12 | 18 |
upper respiratory tract | 1.72e-11 | 19 |
respiratory system epithelium | 3.92e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 6.91e-08 | 29 |