FFCP PHASE1:Hg19::chr10:74385811..74385859,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:74385811..74385859,- to FFCP PHASE1:Hg19::chr10:74385811..74385859,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10367 | |EntrezGene=10367 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1530 | |HGNC=1530 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000401998_5end | |||
|cluster_id=chr10:74385811..74385859,- | |||
|description=CAGE_peak_1_at_MICU1_5end | |||
|id=chr10:74385811..74385859,- | |||
|ontology_enrichment_celltype=CL:0000766!1.19e-08!76;CL:0000839!2.14e-08!70;CL:0002194!5.15e-08!63;CL:0000576!5.15e-08!63;CL:0000040!5.15e-08!63;CL:0000559!5.15e-08!63;CL:0002009!5.09e-07!65;CL:0002057!6.70e-07!42;CL:0000763!6.88e-07!112;CL:0000049!6.88e-07!112 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.59e-09,72;CL:0000839,9.63e-09,66;CL:0002194,2.19e-08,59;CL:0000576,2.19e-08,59;CL:0000040,2.19e-08,59;CL:0000559,2.19e-08,59;CL:0000473,7.55e-08,48;CL:0000234,7.55e-08,48;CL:0002009,2.54e-07,61;CL:0000763,4.85e-07,108;CL:0000049,4.85e-07,108;CL:0000860,6.70e-07,42;CL:0002057,6.70e-07,42;CL:0000557,7.62e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.13e-10!659;UBERON:0000062!2.46e-09!511;UBERON:0002619!1.09e-08!22;UBERON:0000467!1.35e-08!625;UBERON:0001950!2.29e-08!20;UBERON:0000480!2.55e-08!626;UBERON:0000955!2.63e-08!69;UBERON:0006238!2.63e-08!69;UBERON:0001049!3.60e-08!57;UBERON:0005068!3.60e-08!57;UBERON:0006241!3.60e-08!57;UBERON:0007135!3.60e-08!57;UBERON:0002616!4.15e-08!59;UBERON:0002204!9.76e-08!167;UBERON:0004765!1.01e-07!101;UBERON:0001434!1.01e-07!101;UBERON:0001017!1.77e-07!82;UBERON:0001869!2.45e-07!32;UBERON:0000956!3.47e-07!25;UBERON:0000203!3.47e-07!25;UBERON:0005743!3.68e-07!86;UBERON:0001474!5.01e-07!86;UBERON:0001893!5.65e-07!34;UBERON:0000073!6.46e-07!94;UBERON:0001016!6.46e-07!94;UBERON:0002780!8.14e-07!41;UBERON:0001890!8.14e-07!41;UBERON:0006240!8.14e-07!41;UBERON:0000479!8.97e-07!787;UBERON:0003080!9.77e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.15e-08;22!UBERON:0001950;2.46e-08;20!UBERON:0000956;3.51e-07;25!UBERON:0000203;3.51e-07;25!UBERON:0001869;9.78e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.09e-08,22;UBERON:0001434,2.00e-08,100;UBERON:0001950,2.29e-08,20;UBERON:0000955,2.32e-08,68;UBERON:0006238,2.32e-08,68;UBERON:0002204,2.74e-08,167;UBERON:0001049,3.06e-08,56;UBERON:0005068,3.06e-08,56;UBERON:0006241,3.06e-08,56;UBERON:0007135,3.06e-08,56;UBERON:0000073,4.02e-08,53;UBERON:0002616,4.02e-08,53;UBERON:0001017,1.63e-07,81;UBERON:0001869,2.45e-07,32;UBERON:0004765,2.55e-07,90;UBERON:0001474,3.04e-07,82;UBERON:0001016,3.20e-07,89;UBERON:0000956,3.47e-07,25;UBERON:0000203,3.47e-07,25;UBERON:0001893,5.65e-07,34;UBERON:0002780,8.14e-07,41;UBERON:0001890,8.14e-07,41;UBERON:0003080,8.14e-07,41;UBERON:0006240,8.14e-07,41 | |||
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| ||
|short_description=p1@MICU1 | |||
}} | }} |
Latest revision as of 06:02, 19 September 2015
Short description: | p1@MICU1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MICU1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000401998_5end |
EntrezGene: | MICU1 |
HGNC: | 1530 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.59e-09 | 72 |
myeloid lineage restricted progenitor cell | 9.63e-09 | 66 |
monopoietic cell | 2.19e-08 | 59 |
monocyte | 2.19e-08 | 59 |
monoblast | 2.19e-08 | 59 |
promonocyte | 2.19e-08 | 59 |
defensive cell | 7.55e-08 | 48 |
phagocyte | 7.55e-08 | 48 |
macrophage dendritic cell progenitor | 2.54e-07 | 61 |
myeloid cell | 4.85e-07 | 108 |
common myeloid progenitor | 4.85e-07 | 108 |
classical monocyte | 6.70e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.70e-07 | 42 |
granulocyte monocyte progenitor cell | 7.62e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.09e-08 | 22 |
skeletal system | 2.00e-08 | 100 |
neocortex | 2.29e-08 | 20 |
brain | 2.32e-08 | 68 |
future brain | 2.32e-08 | 68 |
musculoskeletal system | 2.74e-08 | 167 |
neural tube | 3.06e-08 | 56 |
neural rod | 3.06e-08 | 56 |
future spinal cord | 3.06e-08 | 56 |
neural keel | 3.06e-08 | 56 |
regional part of nervous system | 4.02e-08 | 53 |
regional part of brain | 4.02e-08 | 53 |
central nervous system | 1.63e-07 | 81 |
cerebral hemisphere | 2.45e-07 | 32 |
skeletal element | 2.55e-07 | 90 |
bone element | 3.04e-07 | 82 |
nervous system | 3.20e-07 | 89 |
cerebral cortex | 3.47e-07 | 25 |
pallium | 3.47e-07 | 25 |
telencephalon | 5.65e-07 | 34 |
regional part of forebrain | 8.14e-07 | 41 |
forebrain | 8.14e-07 | 41 |
anterior neural tube | 8.14e-07 | 41 |
future forebrain | 8.14e-07 | 41 |