FFCP PHASE1:Hg19::chrX:119694538..119694549,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:119694538..119694549,- to FFCP PHASE1:Hg19::chrX:119694538..119694549,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8450 | |EntrezGene=8450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2555 | |HGNC=2555 | ||
|TSSclassifier=strong | |||
|UniProt=Q13620 | |UniProt=Q13620 | ||
|association_with_transcript=5bp_to_ENST00000371322_5end | |||
|cluster_id=chrX:119694538..119694549,- | |||
|coexpression_cluster_id=C964 | |||
|description=CAGE_peak_20_at_CUL4B_5end | |||
|id=chrX:119694538..119694549,- | |||
|ontology_enrichment_celltype=CL:0000055!4.31e-22!180;CL:0000057!9.66e-15!75;CL:0000222!2.71e-13!119;CL:0000680!2.04e-10!57;CL:0000056!2.04e-10!57;CL:0000355!2.04e-10!57;CL:0000077!1.20e-09!19;CL:0000187!3.69e-09!54;CL:0002620!6.81e-08!23;CL:0000183!1.23e-07!59;CL:0000192!1.32e-07!42;CL:0000514!1.32e-07!42;CL:0000393!2.92e-07!60;CL:0000211!2.92e-07!60;CL:0000220!7.98e-07!246;CL:0002321!9.93e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.89e-14;23!CL:0000077;1.89e-13;19!CL:0002564;7.23e-09;3!CL:0002595;5.26e-08;5!CL:0002552;1.36e-07;5!CL:0000197;5.39e-07;6!CL:0000098;5.39e-07;6!CL:0002167;5.39e-07;6!CL:0000057;7.65e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.71e-14,23;CL:0000077,2.64e-13,19;CL:0000057,3.99e-13,76;CL:0002564,6.80e-09,3;CL:0002595,4.90e-08,5;CL:0002552,2.05e-07,5;CL:0000197,5.80e-07,6;CL:0000098,5.80e-07,6;CL:0002167,5.80e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.10e-11;5!DOID:450;5.10e-11;5!DOID:66;5.10e-11;5!DOID:423;5.10e-11;5!DOID:0080000;5.10e-11;5!DOID:11722;5.10e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.82e-11,5;DOID:450,1.82e-11,5;DOID:66,1.82e-11,5;DOID:423,1.82e-11,5;DOID:0080000,1.82e-11,5;DOID:11722,1.82e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!8.61e-10!365;UBERON:0000914!1.40e-09!83;UBERON:0002329!1.40e-09!83;UBERON:0003077!1.40e-09!83;UBERON:0003059!1.40e-09!83;UBERON:0007282!1.40e-09!83;UBERON:0009618!1.40e-09!83;UBERON:0007285!1.40e-09!83;UBERON:0001134!1.03e-08!61;UBERON:0002036!1.03e-08!61;UBERON:0003082!1.03e-08!61;UBERON:0002385!2.21e-08!63;UBERON:0001015!2.21e-08!63;UBERON:0000383!2.21e-08!63;UBERON:0000481!2.82e-08!347;UBERON:0004290!3.82e-08!70;UBERON:0000490!5.19e-08!138;UBERON:0000477!1.41e-07!286;UBERON:0004872!2.16e-07!84;UBERON:0005256!3.67e-07!143;UBERON:0001637!9.22e-07!42;UBERON:0003509!9.22e-07!42;UBERON:0004572!9.22e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;8.58e-14;5!UBERON:0002216;8.58e-14;5!UBERON:0011134;8.58e-14;5!UBERON:0002209;8.58e-14;5!UBERON:0002213;8.58e-14;5!UBERON:0007844;8.58e-14;5!UBERON:0011138;8.58e-14;5!UBERON:0001130;8.58e-14;5!UBERON:0001066;8.58e-14;5!UBERON:0001468;8.58e-14;5!UBERON:0002242;7.23e-09;3!UBERON:0002097;1.71e-08;41!UBERON:0004905;2.09e-08;8!UBERON:0000982;2.09e-08;8!UBERON:0004770;2.09e-08;8!UBERON:0003834;5.26e-08;5!UBERON:0001533;5.26e-08;5!UBERON:0002199;5.61e-07;46!UBERON:0002416;5.61e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,7.94e-14,5;UBERON:0002216,7.94e-14,5;UBERON:0011134,7.94e-14,5;UBERON:0002209,7.94e-14,5;UBERON:0002213,7.94e-14,5;UBERON:0005856,7.94e-14,5;UBERON:0005866,7.94e-14,5;UBERON:0005863,7.94e-14,5;UBERON:0007844,7.94e-14,5;UBERON:0011138,7.94e-14,5;UBERON:0001130,7.94e-14,5;UBERON:0001066,7.94e-14,5;UBERON:0001468,7.94e-14,5;UBERON:0002097,2.21e-10,41;UBERON:0002242,6.80e-09,3;UBERON:0003068,6.80e-09,3;UBERON:0002328,6.80e-09,3;UBERON:0004880,6.80e-09,3;UBERON:0002199,7.70e-09,46;UBERON:0002416,7.70e-09,46;UBERON:0004905,1.99e-08,8;UBERON:0000982,1.99e-08,8;UBERON:0004770,1.99e-08,8;UBERON:0003834,4.90e-08,5;UBERON:0001533,4.90e-08,5 | |||
|phase1_expression=0,0.214100523890983,1.12763523276777,0,0.446961094427288,0,0,0,0,0.737201809504527,0,0,0,14.3568969433654,5.63375538737457,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0.32592226663359,0,0,0.222820913770347,0,0,0,0.25618263945135,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,2.01210257911091,1.2786256184353,2.1686349143074,1.50401373190767,2.462390822334,0,0.486634870302636,0.0945348171640679,0,0.263504357079378,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.626984899610432,0.775250277507987,0.35576626268671,0.33472061276467,0,0.760272105718513,0,0.367663080345869,0.81014194788176,0.982297011124877,1.12264686313085,0.788280363383256,1.53316637465883,0,0,0,0,0,0,0.25326102332916,1.58891016975863,0,0.354668382198357,1.12135520028461,1.06748995729705,0,0.933633106199299,0.404132016209064,1.47115712802113,0.151357427644931,0,0.468642863667593,0.936480230490962,0,1.19558944441441,0.117434498643765,0,0,2.44985005505872,0.61417158655884,1.23990937410919,1.18800285728205,1.23633464639278,0.910161361938026,0,0.505008341862199,0.375355559615893,1.38532057742091,0.438977620880838,0.30648779579902,0.45071417671979,1.70148274740032,1.61450672119976,1.06778694409284,1.69545520927649,1.50045548042201,1.95799805553034,1.8034837803194,1.11670113798954,1.68776332241266,0.876933046450788,1.00973509697646,3.68199594569197,1.77810662500693,0.710019185033229,0.503760491138201,0.169560592310488,0,0,0.286804595389004,0,0.132529768321485,0.464775771478074,0,0.252320850875628,0,1.56449532329816,0,0,1.39310378409594,0,0.118306800039844,0.168584690078102,0.482022059766964,0.220587945464788,0,0.949082476444386,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0,0,2.57351715447788,0,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0.4400297149257,0.387815147273333,0,1.690605505112,0.531876233169741,2.08014873822732,0.514414748524284,0,0.266422179016099,2.28764789853036,0,0,0.977208552881205,4.6200953336531,1.58390374586686,3.31583314765545,2.61460037580088,3.59902768255405,0,0,0,0.239624855491583,0,0,0.723906533337896,1.64381058040307,0.716243852959582,0.112085143993527,0.394061520403854,0,0,0,0,0,0,0,0,0,0,26.2559792278959,6.5022167737758,2.71265023699736,5.19927153827018,3.39015078714607,2.05013139544115,1.40569697991256,0,0,0,0.664225598535437,0.184369168541703,0.434418072340414,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.512556597022804,1.02341449813341,0.482561763430822,0,0.154209693802656,0.177561725313127,0.410635780069046,0.519254429183621,0.116210378459959,0,0.40101294060657,0.0920809889358963,0.574072240823034,0.546273504020151,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.647747748306418,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0.366277859273374,0.082509499920588,0,0,1.6068392984416,0,0.924291702687866,0.460511024178389,0.964856007391714,0.107420244868274,0.580066775656914,0.511359764496605,0.267096106940212,0.165284915360978,0,0,0.10115778085555,0.929691098594572,5.35180989612088,2.7881490806424,0.308033580176089,1.06461206063404,1.73986598415015,0.74129687641568,0.715624433709956,0,0,0.190630193923825,0,0,0.636406495851874,0,0.179872457583315,0.54907405947211,0.471249609382746,0.202182481573316,1.58510321173008,0.842516912477962,0,2.92456187557541,0,0.9554993798559,0.282810863907425,0,4.41092274836899,1.32687795048244,1.31535265576129,0.578775534266688,0.655894752046633,0.811641507850816,0,0.281695602532241,0.286822704408103,0.0982490410131212,0.35667105148125,0.709522128141196,0.211107635297664,0,1.13841952129715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.242721043499027,0,1.13654458722565,0,0.296964680832639,0,0,0.281338832821026,0.222617410045812,0,0,0,0,0,0,0,1.24415835064723,0.359473404589307,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0,0,0.683652335082007,0.23056390438806,0.0897576444097721,0.108647371922008,0,0.549585560411174,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0.728341138602278,0.394584402849391,0,0.61214552326098,0,0,0.72581733978073,0,2.97892760287949,0.627865836814451,3.58417289318877,0,0.27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| ||
|short_description=p20@CUL4B | |||
}} | }} |
Latest revision as of 06:32, 19 September 2015
Short description: | p20@CUL4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_CUL4B_5end |
Coexpression cluster: | C964_Nucleus_Anulus_meningioma_large_Olfactory_Chondrocyte_Mesothelial |
Association with transcript: | 5bp_to_ENST00000371322_5end |
EntrezGene: | CUL4B |
HGNC: | 2555 |
UniProt: | Q13620 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.71e-14 | 23 |
mesothelial cell | 2.64e-13 | 19 |
fibroblast | 3.99e-13 | 76 |
nucleus pulposus cell of intervertebral disc | 6.80e-09 | 3 |
smooth muscle cell of the subclavian artery | 4.90e-08 | 5 |
fibroblast of gingiva | 2.05e-07 | 5 |
receptor cell | 5.80e-07 | 6 |
sensory epithelial cell | 5.80e-07 | 6 |
olfactory epithelial cell | 5.80e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 7.94e-14 | 5 |
symphysis | 7.94e-14 | 5 |
nonsynovial joint | 7.94e-14 | 5 |
fibrous joint | 7.94e-14 | 5 |
cartilaginous joint | 7.94e-14 | 5 |
developing mesenchymal condensation | 7.94e-14 | 5 |
pre-cartilage condensation | 7.94e-14 | 5 |
cartilaginous condensation | 7.94e-14 | 5 |
cartilage element | 7.94e-14 | 5 |
post-cranial axial skeletal system | 7.94e-14 | 5 |
vertebral column | 7.94e-14 | 5 |
intervertebral disk | 7.94e-14 | 5 |
intervertebral joint | 7.94e-14 | 5 |
skin of body | 2.21e-10 | 41 |
nucleus pulposus | 6.80e-09 | 3 |
axial mesoderm | 6.80e-09 | 3 |
notochord | 6.80e-09 | 3 |
chordamesoderm | 6.80e-09 | 3 |
integument | 7.70e-09 | 46 |
integumental system | 7.70e-09 | 46 |
articulation | 1.99e-08 | 8 |
skeletal joint | 1.99e-08 | 8 |
articular system | 1.99e-08 | 8 |
thoracic segment blood vessel | 4.90e-08 | 5 |
subclavian artery | 4.90e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.82e-11 | 5 |
myotonic disease | 1.82e-11 | 5 |
muscle tissue disease | 1.82e-11 | 5 |
myopathy | 1.82e-11 | 5 |
muscular disease | 1.82e-11 | 5 |
myotonic dystrophy | 1.82e-11 | 5 |