FFCP PHASE1:Hg19::chr4:89080003..89080075,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9429 | |EntrezGene=9429 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=74 | |HGNC=74 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNQ0 | |UniProt=Q9UNQ0 | ||
|association_with_transcript=0bp_to_ENST00000237612,NM_004827,uc003hrg.2,uc003hrj.1_5end | |association_with_transcript=0bp_to_ENST00000237612,NM_004827,uc003hrg.2,uc003hrj.1_5end | ||
|cluster_id=chr4:89080003..89080075,- | |||
|description=CAGE_peak_1_at_ABCG2_5end | |description=CAGE_peak_1_at_ABCG2_5end | ||
|id=chr4:89080003..89080075,- | |id=chr4:89080003..89080075,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.53e-07;7!CL:0000586;2.53e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.96e-07,7;CL:0000586,1.96e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.24e-32!115;UBERON:0001049!4.36e-14!57;UBERON:0005068!4.36e-14!57;UBERON:0006241!4.36e-14!57;UBERON:0007135!4.36e-14!57;UBERON:0001017!1.35e-12!82;UBERON:0005743!3.00e-12!86;UBERON:0002616!2.63e-11!59;UBERON:0000955!6.23e-11!69;UBERON:0006238!6.23e-11!69;UBERON:0003080!7.73e-11!42;UBERON:0002780!1.61e-10!41;UBERON:0001890!1.61e-10!41;UBERON:0006240!1.61e-10!41;UBERON:0000073!2.11e-10!94;UBERON:0001016!2.11e-10!94;UBERON:0000477!5.56e-10!286;UBERON:0003075!3.04e-09!86;UBERON:0007284!3.04e-09!86;UBERON:0001950!7.87e-09!20;UBERON:0004111!1.06e-08!241;UBERON:0000468!1.65e-08!659;UBERON:0004119!1.81e-08!169;UBERON:0000925!1.81e-08!169;UBERON:0006595!1.81e-08!169;UBERON:0001007!1.94e-08!155;UBERON:0001555!1.94e-08!155;UBERON:0007026!1.94e-08!155;UBERON:0002619!2.02e-08!22;UBERON:0001893!2.54e-08!34;UBERON:0002346!3.37e-08!90;UBERON:0002020!3.84e-08!34;UBERON:0003528!3.84e-08!34;UBERON:0002791!7.62e-08!33;UBERON:0000922!1.34e-07!612;UBERON:0001869!1.66e-07!32;UBERON:0000153!1.81e-07!129;UBERON:0007811!1.81e-07!129;UBERON:0000025!2.22e-07!194;UBERON:0000033!3.48e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.72e-11;53!UBERON:0002616;3.72e-11;53!UBERON:0002780;4.83e-11;41!UBERON:0001890;4.83e-11;41!UBERON:0007023;1.63e-09;114!UBERON:0001950;1.13e-08;20!UBERON:0001893;1.30e-08;34!UBERON:0002619;1.39e-08;22!UBERON:0003528;2.60e-08;34!UBERON:0002020;2.60e-08;34!UBERON:0002791;4.53e-08;32!UBERON:0001869;4.69e-08;32!UBERON:0000178;8.44e-08;15!UBERON:0000179;8.44e-08;15!UBERON:0000463;8.44e-08;15!UBERON:0000956;4.43e-07;25!UBERON:0000203;4.43e-07;25!UBERON:0000955;7.76e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.57e-34,114;UBERON:0001049,1.19e-18,56;UBERON:0005068,1.19e-18,56;UBERON:0006241,1.19e-18,56;UBERON:0007135,1.19e-18,56;UBERON:0000073,1.39e-17,53;UBERON:0002616,1.39e-17,53;UBERON:0011216,2.83e-17,223;UBERON:0001017,4.73e-17,81;UBERON:0001016,5.71e-15,89;UBERON:0000955,7.29e-15,68;UBERON:0006238,7.29e-15,68;UBERON:0002780,1.66e-14,41;UBERON:0001890,1.66e-14,41;UBERON:0003080,1.66e-14,41;UBERON:0006240,1.66e-14,41;UBERON:0003075,1.66e-11,82;UBERON:0007284,1.66e-11,82;UBERON:0001893,1.05e-10,34;UBERON:0003528,1.94e-10,34;UBERON:0002020,1.94e-10,34;UBERON:0002346,2.01e-10,86;UBERON:0003056,1.70e-09,61;UBERON:0001869,1.88e-09,32;UBERON:0002791,3.08e-09,32;UBERON:0002619,1.27e-08,22;UBERON:0001950,1.28e-08,20;UBERON:0010371,3.40e-08,104;UBERON:0000178,7.91e-08,15;UBERON:0000179,7.91e-08,15;UBERON:0000463,7.91e-08,15;UBERON:0000956,4.11e-07,25;UBERON:0000203,4.11e-07,25;UBERON:0004111,9.81e-07,240 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0.263766978228454,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0.587200878669695,0,0.401088894940283,0.217010870715852,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0.199463657621632,0,0.580418477257168,0.56738522469114,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0.400395987036012,0.574752439954483,1.32208974556972,0,0.569212969109448,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.384273959177026,0.260118695119756,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,2.03017567021455,0,0.370784442784429,1.29818957461873,2.26368658489047,1.19662164466979,0,0,0,0.198762407366705,0.860234595106124,1.04142150482278,1.69592382577203,0.838998872419812,0.825354125820202,0.417989933073621,5.68516870172524,2.13459757612026,1.00416183829401,0.805658634218294,0,0,0.367663080345869,1.62028389576352,0.446498641420399,0.673588117878509,1.68917220724983,0,0,0.916008719652036,0,0,0,0,0,1.05927344650575,0.286836620748814,0.709336764396714,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,1.54608682530637,0.818238361772504,1.72082757233402,1.21973706129595,1.19276791489337,2.67246068599892,2.90250954043037,1.00928340350251,0.36497735907583,0,0,0,0,0,2.48444280083672,1.85443159085912,4.09718750801919,2.09558548191549,2.17879444092406,4.98268300133303,2.83145747136345,0.784885860501384,1.53898862778556,2.95262181849859,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,36.1586009316754,0,0.439001141634502,1.1240175325762,0.402115889646523,0.185176890317059,0,0,1.44331342025273,0,0.117408694235822,0,0,0.190254152234598,1.58040879591855,3.43394464837949,0,1.17002132569619,0.297262324577456,0.93733833986777,0.503946384596579,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0.823240336780769,0,0,0.791951872933429,0.904318131178758,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.434418072340414,0,0,0,0,0.106727557803444,0.909382714338778,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.492762936082855,1.03850885836724,0.581051892299796,48.2229203870573,1.40354529212299,0,0.918515585316854,0.546273504020151,0.393373244878272,0.451199612907412,0.385076685522074,0,0,0,0,0.680374821106063,0.647747748306418,0,0,0,0,0,0.223874754722178,46.2638339722922,52.548525656005,0,0,0.325378394664303,4.32772248920434,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0.715624433709956,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0.353437207037059,0.808729926293264,0,0,0,0.974853958525138,0,0,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0,0.860468113224309,0.0982490410131212,0,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0.192444225451024,0,0,5.55448424582997,0.43050537267123,0,0.443430153536676,0.689170200620878,5.07447609232169,4.58782324285425,2.84823593587081,1.66762242820452,0.411362273086194,1.29694662238543,6.48037724685738,6.34500141035416,14.8485458867188,0,0.735120647943095,0,0.577076851905779,0,0.956557636372934,0,0.383010740264733,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,2.16364542780786,0,0,0,2.05111450980652,0,0.111443384277478,0,0.71623345421307,0,0,0.994147647766298,2.2507106625682,1.22439575525196,0,0,0.19924798825107,0.276283915531148,2.26739473068848,0,0,0,0.359473404589307,2.32727527078292,0,2.07151151837561,2.3948309234694,0,6.78532922266653,2.78304294485554,1.99613798001194,5.72941074387513,0,1.44999915086959,1.0241410345695,0.254253650292766,1.89110145414349,0,0,0,0,2.89431452700979,0,1.76926815889959,1.47773809476774,3.07139556015562,0.544692317594951,0.139423744278603,3.61666214967846,0.341826167541004,2.99733075704478,15.6178301273004,97.0221031263532,0.957003479195758,1.92354946143911,2.66517388009317,0,0,1.66211681900156,0.225595660617181,0,0,0.37950746544837,1.90723894776454,0.421996129056054,0.489698424477443,4.94735750018793,0,0.995261931078505,34.1446198982889,3.05515072466813,11.8608451472249,10.1322429936132,12.6350558901601,4.04406797884062,0,3.98249557733077,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| ||
|short_description=p1@ABCG2 | |short_description=p1@ABCG2 | ||
}} | }} |
Latest revision as of 07:10, 19 September 2015
Short description: | p1@ABCG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABCG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000237612, NM_004827, uc003hrg.2, uc003hrj.1_5end |
EntrezGene: | ABCG2 |
HGNC: | 74 |
UniProt: | Q9UNQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.96e-07 | 7 |
germ cell | 1.96e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.57e-34 | 114 |
neural tube | 1.19e-18 | 56 |
neural rod | 1.19e-18 | 56 |
future spinal cord | 1.19e-18 | 56 |
neural keel | 1.19e-18 | 56 |
regional part of nervous system | 1.39e-17 | 53 |
regional part of brain | 1.39e-17 | 53 |
organ system subdivision | 2.83e-17 | 223 |
central nervous system | 4.73e-17 | 81 |
nervous system | 5.71e-15 | 89 |
brain | 7.29e-15 | 68 |
future brain | 7.29e-15 | 68 |
regional part of forebrain | 1.66e-14 | 41 |
forebrain | 1.66e-14 | 41 |
anterior neural tube | 1.66e-14 | 41 |
future forebrain | 1.66e-14 | 41 |
neural plate | 1.66e-11 | 82 |
presumptive neural plate | 1.66e-11 | 82 |
telencephalon | 1.05e-10 | 34 |
brain grey matter | 1.94e-10 | 34 |
gray matter | 1.94e-10 | 34 |
neurectoderm | 2.01e-10 | 86 |
pre-chordal neural plate | 1.70e-09 | 61 |
cerebral hemisphere | 1.88e-09 | 32 |
regional part of telencephalon | 3.08e-09 | 32 |
regional part of cerebral cortex | 1.27e-08 | 22 |
neocortex | 1.28e-08 | 20 |
ecto-epithelium | 3.40e-08 | 104 |
blood | 7.91e-08 | 15 |
haemolymphatic fluid | 7.91e-08 | 15 |
organism substance | 7.91e-08 | 15 |
cerebral cortex | 4.11e-07 | 25 |
pallium | 4.11e-07 | 25 |
anatomical conduit | 9.81e-07 | 240 |