FFCP PHASE1:Hg19::chr3:105085428..105085442,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:105085428..105085442,+
|short_description=p6@ALCAM
|description=CAGE_peak_6_at_ALCAM_5end
|association_with_transcript=-114bp_to_NM_001243280,NM_001243281,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=214 | |EntrezGene=214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=400 | |HGNC=400 | ||
|TSSclassifier=strong | |||
|UniProt=B4DTU0,Q13740,B3KNN9,Q6PEY4 | |UniProt=B4DTU0,Q13740,B3KNN9,Q6PEY4 | ||
|association_with_transcript=-114bp_to_NM_001243280,NM_001243281,NM_001243283,NM_001627_5end | |||
|cluster_id=chr3:105085428..105085442,+ | |||
|coexpression_cluster_id=C1916 | |||
|description=CAGE_peak_6_at_ALCAM_5end | |||
|id=chr3:105085428..105085442,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.83e-17!679;CL:0000004!3.83e-17!679;CL:0000255!3.83e-17!679;CL:0000012!6.45e-17!682;CL:0000055!7.28e-15!180;CL:0000144!1.73e-12!625;CL:0002371!1.14e-11!591;CL:0000057!1.08e-10!75;CL:0000003!3.90e-10!722;CL:0000063!6.89e-08!578 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.30e-10;39!CL:0000234;1.30e-10;39!CL:0000860;1.61e-10;33!CL:0002057;1.61e-10;33!CL:0002334;2.32e-08;12!CL:0000056;5.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.77e-10,61;CL:0002194,5.19e-10,59;CL:0000576,5.19e-10,59;CL:0000040,5.19e-10,59;CL:0000559,5.19e-10,59;CL:0000473,1.70e-09,48;CL:0000234,1.70e-09,48;CL:0000557,6.91e-09,67;CL:0000048,7.98e-09,427;CL:0000134,9.26e-09,354;CL:0002320,1.31e-08,361;CL:0002334,1.64e-08,12;CL:0000723,2.25e-08,433;CL:0000839,3.23e-08,66;CL:0000860,3.70e-08,42;CL:0002057,3.70e-08,42;CL:0000219,4.86e-08,386;CL:0000057,8.28e-08,76;CL:0000034,8.48e-08,441;CL:0000515,5.20e-07,4;CL:0000766,5.53e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000515;5.80e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.23e-07!167;UBERON:0004923!9.90e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.27e-07;9!UBERON:0000042;3.27e-07;9!UBERON:0000488;9.04e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.85e-10,371;UBERON:0001434,4.83e-10,100;UBERON:0002371,3.17e-09,76;UBERON:0001474,1.11e-08,82;UBERON:0004765,1.52e-08,90;UBERON:0002204,4.16e-08,167;UBERON:0000488,8.96e-07,4 | |||
|phase1_expression=16.8960892721618,10.2768251467672,11.4173067317737,8.00586386825043,0.893922188854576,4.36169262050184,0,0,0,0.245733936501509,0,4.36882744260345,0.527533956456907,0.990130823680373,0.331397375727916,2.01697543935533,0.602694528023977,0,0.975865597581014,0.492484232307152,1.42800483870977,0,0.286235987131057,0.821246550437305,0.87879847716362,0,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0.755751887377619,0.485168122375632,0,5.34518254428373,1.23882548358041,0,1.2808035326455,0.945928919554341,2.75796544589295,3.22742341791913,4.06279459783025,0.376484679085209,1.91034305040492,2.02251136000576,1.83650335422542,1.92557416245656,3.19668562899521,0,0.199463657621632,0,3.77272010217159,7.37600792098482,6.85104473895132,2.00998932205395,3.12889751052121,0.65156653411535,3.63239701580021,7.36555271975129,9.17740923578565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,1.44575660953827,1.50401373190767,1.01392563272577,0.795285947051099,0,5.0103453096956,2.88248216701333,4.3917392846563,0.0654895377488563,0,0,4.21911611751088,5.74628133087582,5.05240249971688,0.238490624305342,0,0,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,1.25396979922086,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0.949265659568129,0,0,0,0,1.49091585508596,2.02608818663328,0.926864265692532,3.72887606973458,0.354668382198357,0.560677600142307,0,0.24666754841716,0.622422070799533,1.75123873690594,0.490385709340376,1.21085942115945,0.576175924479999,0.468642863667593,0,0,0,1.05691048779388,1.13311061057692,0.98315564691574,0.61246251376468,0.368502951935304,0.309977343527296,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0.625592599359821,1.10825646193673,3.07284334616587,1.22595118319608,0.45071417671979,1.58805056424029,5.38168907066586,0.213557388818567,0.211931901159562,5.10154863343484,0.721367704669072,2.83404594050192,0.930584281657949,7.93248761533951,4.96928726322113,2.27190396819703,0.0920498986422993,0.323292113637624,8.87523981291536,4.23158812556089,1.69560592310488,0.386521706326594,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,1.28648187638577,2.76269842704961,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0.661763836394364,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0,2.05881372358231,0,0,0.100528972411631,0.555530670951178,0.651616610620649,0,0,0.231860809950154,2.34817388471643,0.144366447761074,0,0.380508304469197,0,0,1.23108503043699,18.0183284157213,7.28292695214768,1.87467667973554,0.503946384596579,0.567100388969546,0.179117045405697,0,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0.380987365753014,0.763976851116555,0,0,0.925447434329912,0.901029173531752,0,1.23344192779897,0,3.9602674343313,0,0,0,0.26593811658487,0,0.771622122786426,0,1.3321108950805,0.142977993658148,0,0.823240336780769,2.28015329005615,0,0.791951872933429,0,0,0,0,0,0,2.87549826589899,2.29723871668228,1.42636905040718,10.4242540800657,4.52047909610843,9.31117008847457,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.24538298343828,1.50051156317903,0.813795071099207,0.831883446123229,1.42743191037729,1.26161932027148,3.86566669475954,1.50473049863859,2.27407504055985,1.03473071292505,3.98535359121262,1.84369168541703,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0.606255142892519,1.66435439510497,3.32629322662648,2.97729369382532,5.52463103837025,3.64858122762996,2.43464383585832,2.04682899626681,1.60853921143608,4.45254199334973,1.69630663182921,0.532685175939381,0.410635780069046,0,1.16210378459959,0,0,0,0.229628896329213,0,0,0.902399225814824,0.385076685522074,0,0,0.633309773357254,0,0.170093705276516,1.94324324491925,1.54227252690289,0,0.501689773854853,0.764628819135115,0,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0.309123034943167,0.0915694648183434,0.165018999841176,0,0,4.82051789532479,0.096670718292122,0.462145851343933,0,0.827019434907183,0.107420244868274,0.145016693914229,0.852266274161009,0,0.165284915360978,0.768760269460425,0.638063562472921,0.6069466851333,0,5.35180989612088,0.6970372701606,1.84820148105653,0,1.73986598415015,0.55597265731176,1.00187420719394,0.372158369359667,0.949138274156178,0.571890581771475,0,0.42793898803392,0.318203247925937,0,0.359744915166629,0,0.353437207037059,0.202182481573316,0,0,0,1.46228093778771,0,0.136499911407986,0.141405431953713,0,0.551365343546124,1.99031692572366,0.876901770507525,0,0,0.608731130888112,0.6196469961995,1.12678241012897,0.860468113224309,1.57198465620994,0,0.354761064070598,1.26664581178598,1.31717957183961,0.379473173765715,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0.1995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|phase1_expression=16.8960892721618,10.2768251467672,11.4173067317737,8.00586386825043,0.893922188854576,4.36169262050184,0,0,0,0.245733936501509,0,4.36882744260345,0.527533956456907,0.990130823680373,0.331397375727916,2.01697543935533,0.602694528023977,0,0.975865597581014,0.492484232307152,1.42800483870977,0,0.286235987131057,0.821246550437305,0.87879847716362,0,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0.755751887377619,0.485168122375632,0,5.34518254428373,1.23882548358041,0,1.2808035326455,0.945928919554341,2.75796544589295,3.22742341791913,4.06279459783025,0.376484679085209,1.91034305040492,2.02251136000576,1.83650335422542,1.92557416245656,3.19668562899521,0,0.199463657621632,0,3.77272010217159,7.37600792098482,6.85104473895132,2.00998932205395,3.12889751052121,0.65156653411535,3.63239701580021,7.36555271975129,9.17740923578565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,1.44575660953827,1.50401373190767,1.01392563272577,0.795285947051099,0,5.0103453096956,2.88248216701333,4.3917392846563,0.0654895377488563,0,0,4.21911611751088,5.74628133087582,5.05240249971688,0.238490624305342,0,0,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,1.25396979922086,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0.949265659568129,0,0,0,0,1.49091585508596,2.02608818663328,0.926864265692532,3.72887606973458,0.354668382198357,0.560677600142307,0,0.24666754841716,0.622422070799533,1.75123873690594,0.490385709340376,1.21085942115945,0.576175924479999,0.468642863667593,0,0,0,1.05691048779388,1.13311061057692,0.98315564691574,0.61246251376468,0.368502951935304,0.309977343527296,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0.625592599359821,1.10825646193673,3.07284334616587,1.22595118319608,0.45071417671979,1.58805056424029,5.38168907066586,0.213557388818567,0.211931901159562,5.10154863343484,0.721367704669072,2.83404594050192,0.930584281657949,7.93248761533951,4.96928726322113,2.27190396819703,0.0920498986422993,0.323292113637624,8.87523981291536,4.23158812556089,1.69560592310488,0.386521706326594,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,1.28648187638577,2.76269842704961,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0.661763836394364,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0,2.05881372358231,0,0,0.100528972411631,0.555530670951178,0.651616610620649,0,0,0.231860809950154,2.34817388471643,0.144366447761074,0,0.380508304469197,0,0,1.23108503043699,18.0183284157213,7.28292695214768,1.87467667973554,0.503946384596579,0.567100388969546,0.179117045405697,0,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0.380987365753014,0.763976851116555,0,0,0.925447434329912,0.901029173531752,0,1.23344192779897,0,3.9602674343313,0,0,0,0.26593811658487,0,0.771622122786426,0,1.3321108950805,0.142977993658148,0,0.823240336780769,2.28015329005615,0,0.791951872933429,0,0,0,0,0,0,2.87549826589899,2.29723871668228,1.42636905040718,10.4242540800657,4.52047909610843,9.31117008847457,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.24538298343828,1.50051156317903,0.813795071099207,0.831883446123229,1.42743191037729,1.26161932027148,3.86566669475954,1.50473049863859,2.27407504055985,1.03473071292505,3.98535359121262,1.84369168541703,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0.606255142892519,1.66435439510497,3.32629322662648,2.97729369382532,5.52463103837025,3.64858122762996,2.43464383585832,2.04682899626681,1.60853921143608,4.45254199334973,1.69630663182921,0.532685175939381,0.410635780069046,0,1.16210378459959,0,0,0,0.229628896329213,0,0,0.902399225814824,0.385076685522074,0,0,0.633309773357254,0,0.170093705276516,1.94324324491925,1.54227252690289,0,0.501689773854853,0.764628819135115,0,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0.309123034943167,0.0915694648183434,0.165018999841176,0,0,4.82051789532479,0.096670718292122,0.462145851343933,0,0.827019434907183,0.107420244868274,0.145016693914229,0.852266274161009,0,0.165284915360978,0.768760269460425,0.638063562472921,0.6069466851333,0,5.35180989612088,0.6970372701606,1.84820148105653,0,1.73986598415015,0.55597265731176,1.00187420719394,0.372158369359667,0.949138274156178,0.571890581771475,0,0.42793898803392,0.318203247925937,0,0.359744915166629,0,0.353437207037059,0.202182481573316,0,0,0,1.46228093778771,0,0.136499911407986,0.141405431953713,0,0.551365343546124,1.99031692572366,0.876901770507525,0,0,0.608731130888112,0.6196469961995,1.12678241012897,0.860468113224309,1.57198465620994,0,0.354761064070598,1.26664581178598,1.31717957183961,0.379473173765715,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0.1995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| ||
|short_description=p6@ALCAM | |||
}} | }} |
Latest revision as of 09:09, 19 September 2015
Short description: | p6@ALCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ALCAM_5end |
Coexpression cluster: | C1916_Fibroblast_amniotic_Adipocyte_Smooth_immature_CD14_normal |
Association with transcript: | -114bp_to_NM_001243280, NM_001243281, NM_001243283, NM_001627_5end |
EntrezGene: | ALCAM |
HGNC: | 400 |
UniProt: | B4DTU0Q13740B3KNN9Q6PEY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.77e-10 | 61 |
monopoietic cell | 5.19e-10 | 59 |
monocyte | 5.19e-10 | 59 |
monoblast | 5.19e-10 | 59 |
promonocyte | 5.19e-10 | 59 |
defensive cell | 1.70e-09 | 48 |
phagocyte | 1.70e-09 | 48 |
granulocyte monocyte progenitor cell | 6.91e-09 | 67 |
multi fate stem cell | 7.98e-09 | 427 |
mesenchymal cell | 9.26e-09 | 354 |
connective tissue cell | 1.31e-08 | 361 |
preadipocyte | 1.64e-08 | 12 |
somatic stem cell | 2.25e-08 | 433 |
myeloid lineage restricted progenitor cell | 3.23e-08 | 66 |
classical monocyte | 3.70e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.70e-08 | 42 |
motile cell | 4.86e-08 | 386 |
fibroblast | 8.28e-08 | 76 |
stem cell | 8.48e-08 | 441 |
skeletal muscle myoblast | 5.20e-07 | 4 |
myeloid leukocyte | 5.53e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.85e-10 | 371 |
skeletal system | 4.83e-10 | 100 |
bone marrow | 3.17e-09 | 76 |
bone element | 1.11e-08 | 82 |
skeletal element | 1.52e-08 | 90 |
musculoskeletal system | 4.16e-08 | 167 |
atypical epithelium | 8.96e-07 | 4 |