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FFCP PHASE1:Hg19::chr12:56583362..56583369,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=6601
|EntrezGene=6601
Line 8: Line 8:
|UniProt=F8VTJ5,Q59GV3,Q8TAQ2
|UniProt=F8VTJ5,Q59GV3,Q8TAQ2
|association_with_transcript=-11bp_to_ENST00000394023,NM_001130420,NM_003075,NM_139067,uc001ska.2,uc001skb.2,uc001skc.2,uc001skd.2,uc010sqf.1_5end
|association_with_transcript=-11bp_to_ENST00000394023,NM_001130420,NM_003075,NM_139067,uc001ska.2,uc001skb.2,uc001skc.2,uc001skd.2,uc010sqf.1_5end
|cluster_id=chr12:56583362..56583369,-
|description=CAGE_peak_7_at_SMARCC2_5end
|description=CAGE_peak_7_at_SMARCC2_5end
|id=chr12:56583362..56583369,-
|id=chr12:56583362..56583369,-

Latest revision as of 10:19, 19 September 2015

Short description:p7@SMARCC2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_7_at_SMARCC2_5end
Coexpression cluster:NA
Association with transcript: -11bp_to_ENST00000394023, NM_001130420, NM_003075, NM_139067, uc001ska.2, uc001skb.2, uc001skc.2, uc001skd.2, uc010sqf.1_5end
EntrezGene:SMARCC2
HGNC: 11105
UniProt: F8VTJ5Q59GV3Q8TAQ2
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data