FFCP PHASE1:Hg19::chr6:101846725..101846734,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2898 | |EntrezGene=2898 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4580 | |HGNC=4580 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAD3 | |UniProt=G3XAD3 | ||
|association_with_transcript=56bp_to_ENST00000358361_5end | |association_with_transcript=56bp_to_ENST00000358361_5end | ||
|cluster_id=chr6:101846725..101846734,+ | |||
|coexpression_cluster_id=C118 | |coexpression_cluster_id=C118 | ||
|description=CAGE_peak_17_at_GRIK2_5end | |description=CAGE_peak_17_at_GRIK2_5end | ||
|id=chr6:101846725..101846734,+ | |id=chr6:101846725..101846734,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.12e-38;3!UBERON:0010122;1.91e-15;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.56e-72!57;UBERON:0005068!8.56e-72!57;UBERON:0006241!8.56e-72!57;UBERON:0007135!8.56e-72!57;UBERON:0001893!5.23e-68!34;UBERON:0001869!1.35e-66!32;UBERON:0002780!8.78e-66!41;UBERON:0001890!8.78e-66!41;UBERON:0006240!8.78e-66!41;UBERON:0002616!9.59e-65!59;UBERON:0002791!3.49e-64!33;UBERON:0003080!4.15e-64!42;UBERON:0002619!5.68e-59!22;UBERON:0001950!4.20e-58!20;UBERON:0000955!1.78e-57!69;UBERON:0006238!1.78e-57!69;UBERON:0002020!6.63e-57!34;UBERON:0003528!6.63e-57!34;UBERON:0001017!4.98e-54!82;UBERON:0000073!7.06e-52!94;UBERON:0001016!7.06e-52!94;UBERON:0000956!1.15e-51!25;UBERON:0000203!1.15e-51!25;UBERON:0005743!3.15e-51!86;UBERON:0003075!1.50e-48!86;UBERON:0007284!1.50e-48!86;UBERON:0002346!4.36e-46!90;UBERON:0003056!1.51e-42!61;UBERON:0000033!1.05e-31!123;UBERON:0007023!3.20e-30!115;UBERON:0000153!6.59e-30!129;UBERON:0007811!6.59e-30!129;UBERON:0004121!8.21e-26!169;UBERON:0000924!4.80e-25!173;UBERON:0006601!4.80e-25!173;UBERON:0002021!1.28e-22!5;UBERON:0001871!2.83e-19!7;UBERON:0000200!1.28e-18!6;UBERON:0000025!1.58e-17!194;UBERON:0001872!3.67e-15!5;UBERON:0002771!5.87e-14!3;UBERON:0004111!1.10e-12!241;UBERON:0002420!3.03e-12!9;UBERON:0007245!3.03e-12!9;UBERON:0010009!3.03e-12!9;UBERON:0010011!3.03e-12!9;UBERON:0000454!3.03e-12!9;UBERON:0000064!1.96e-11!219;UBERON:0000369!5.25e-11!4;UBERON:0002435!5.25e-11!4;UBERON:0000204!5.25e-11!4;UBERON:0010082!5.25e-11!4;UBERON:0009663!1.34e-10!7;UBERON:0000477!1.91e-10!286;UBERON:0003076!3.03e-10!15;UBERON:0003057!3.03e-10!15;UBERON:0004733!2.70e-09!12;UBERON:0002028!2.70e-09!12;UBERON:0007277!2.70e-09!12;UBERON:0000483!4.41e-09!309;UBERON:0000119!6.35e-09!312;UBERON:0004732!1.48e-08!13;UBERON:0000349!2.41e-08!5;UBERON:0002308!2.98e-08!9;UBERON:0000125!2.98e-08!9;UBERON:0000475!6.51e-08!365;UBERON:0005383!4.73e-07!3;UBERON:0005382!4.73e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!8.56e-72!57;UBERON:0005068!8.56e-72!57;UBERON:0006241!8.56e-72!57;UBERON:0007135!8.56e-72!57;UBERON:0001893!5.23e-68!34;UBERON:0001869!1.35e-66!32;UBERON:0002780!8.78e-66!41;UBERON:0001890!8.78e-66!41;UBERON:0006240!8.78e-66!41;UBERON:0002616!9.59e-65!59;UBERON:0002791!3.49e-64!33;UBERON:0003080!4.15e-64!42;UBERON:0002619!5.68e-59!22;UBERON:0001950!4.20e-58!20;UBERON:0000955!1.78e-57!69;UBERON:0006238!1.78e-57!69;UBERON:0002020!6.63e-57!34;UBERON:0003528!6.63e-57!34;UBERON:0001017!4.98e-54!82;UBERON:0000073!7.06e-52!94;UBERON:0001016!7.06e-52!94;UBERON:0000956!1.15e-51!25;UBERON:0000203!1.15e-51!25;UBERON:0005743!3.15e-51!86;UBERON:0003075!1.50e-48!86;UBERON:0007284!1.50e-48!86;UBERON:0002346!4.36e-46!90;UBERON:0003056!1.51e-42!61;UBERON:0000033!1.05e-31!123;UBERON:0007023!3.20e-30!115;UBERON:0000153!6.59e-30!129;UBERON:0007811!6.59e-30!129;UBERON:0004121!8.21e-26!169;UBERON:0000924!4.80e-25!173;UBERON:0006601!4.80e-25!173;UBERON:0002021!1.28e-22!5;UBERON:0001871!2.83e-19!7;UBERON:0000200!1.28e-18!6;UBERON:0000025!1.58e-17!194;UBERON:0001872!3.67e-15!5;UBERON:0002771!5.87e-14!3;UBERON:0004111!1.10e-12!241;UBERON:0002420!3.03e-12!9;UBERON:0007245!3.03e-12!9;UBERON:0010009!3.03e-12!9;UBERON:0010011!3.03e-12!9;UBERON:0000454!3.03e-12!9;UBERON:0000064!1.96e-11!219;UBERON:0000369!5.25e-11!4;UBERON:0002435!5.25e-11!4;UBERON:0000204!5.25e-11!4;UBERON:0010082!5.25e-11!4;UBERON:0009663!1.34e-10!7;UBERON:0000477!1.91e-10!286;UBERON:0003076!3.03e-10!15;UBERON:0003057!3.03e-10!15;UBERON:0004733!2.70e-09!12;UBERON:0002028!2.70e-09!12;UBERON:0007277!2.70e-09!12;UBERON:0000483!4.41e-09!309;UBERON:0000119!6.35e-09!312;UBERON:0004732!1.48e-08!13;UBERON:0000349!2.41e-08!5;UBERON:0002308!2.98e-08!9;UBERON:0000125!2.98e-08!9;UBERON:0000475!6.51e-08!365;UBERON:0005383!4.73e-07!3;UBERON:0005382!4.73e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.61e-23;5!UBERON:0002037;6.17e-20;6!UBERON:0001873;1.91e-15;2!UBERON:0002680;1.19e-13;9!UBERON:0001895;1.19e-13;9!UBERON:0000073;2.06e-13;53!UBERON:0002616;2.06e-13;53!UBERON:0001950;7.89e-13;20!UBERON:0002791;1.46e-12;32!UBERON:0001869;2.24e-12;32!UBERON:0001893;2.24e-12;34!UBERON:0002619;8.88e-12;22!UBERON:0003528;2.74e-11;34!UBERON:0002020;2.74e-11;34!UBERON:0002114;9.43e-11;2!UBERON:0005383;9.43e-11;3!UBERON:0005382;9.43e-11;3!UBERON:0000956;1.68e-10;25!UBERON:0000203;1.68e-10;25!UBERON:0004733;1.72e-10;12!UBERON:0002028;1.72e-10;12!UBERON:0001017;2.30e-10;75!UBERON:0002780;5.14e-10;41!UBERON:0001890;5.14e-10;41!UBERON:0004732;9.30e-10;13!UBERON:0000955;4.01e-09;68!UBERON:0001016;1.35e-08;83!UBERON:0000369;2.18e-08;4!UBERON:0002435;2.18e-08;4!UBERON:0000204;2.18e-08;4!UBERON:0002108;5.86e-07;4!UBERON:0001872;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.44e-23,5;UBERON:0002037,4.86e-20,6;UBERON:0006215,4.86e-20,6;UBERON:0000073,4.39e-19,53;UBERON:0002616,4.39e-19,53;UBERON:0001049,4.26e-18,56;UBERON:0005068,4.26e-18,56;UBERON:0006241,4.26e-18,56;UBERON:0007135,4.26e-18,56;UBERON:0001873,2.74e-15,2;UBERON:0010122,2.74e-15,2;UBERON:0000955,8.54e-15,68;UBERON:0006238,8.54e-15,68;UBERON:0002791,3.78e-14,32;UBERON:0001869,3.78e-14,32;UBERON:0002680,1.02e-13,9;UBERON:0001895,1.02e-13,9;UBERON:0010092,1.02e-13,9;UBERON:0003528,2.26e-13,34;UBERON:0002020,2.26e-13,34;UBERON:0001893,2.26e-13,34;UBERON:0001950,8.05e-13,20;UBERON:0001017,1.61e-12,81;UBERON:0003075,1.61e-12,82;UBERON:0007284,1.61e-12,82;UBERON:0002346,5.91e-12,86;UBERON:0002619,9.05e-12,22;UBERON:0001016,2.56e-11,89;UBERON:0002780,3.14e-11,41;UBERON:0001890,3.14e-11,41;UBERON:0003080,3.14e-11,41;UBERON:0006240,3.14e-11,41;UBERON:0002114,8.99e-11,2;UBERON:0005383,1.20e-10,3;UBERON:0005382,1.20e-10,3;UBERON:0004733,1.53e-10,12;UBERON:0002028,1.53e-10,12;UBERON:0007277,1.53e-10,12;UBERON:0000956,1.71e-10,25;UBERON:0000203,1.71e-10,25;UBERON:0010371,6.10e-10,104;UBERON:0004732,8.34e-10,13;UBERON:0003076,1.27e-08,15;UBERON:0003057,1.27e-08,15;UBERON:0000369,2.61e-08,4;UBERON:0002435,2.61e-08,4;UBERON:0000204,2.61e-08,4;UBERON:0010082,2.61e-08,4;UBERON:0010314,7.02e-08,132;UBERON:0003056,9.42e-08,61;UBERON:0002108,5.70e-07,4;UBERON:0001872,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08536794762867,0,2.32216445855572,1.47773809476774,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.789744236554321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.250381861413,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0.323474434190045,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.770750701157514,1.41696576325585,1.27707087245721,0.41023272848151,0.504143392443436,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0.620060389503552,0.634158101939068,1.09394961803644,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0.951576261675644,0.657727735628491,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,1.30905207102113,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08536794762867,0,2.32216445855572,1.47773809476774,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.789744236554321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.250381861413,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0.323474434190045,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.770750701157514,1.41696576325585,1.27707087245721,0.41023272848151,0.504143392443436,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0.620060389503552,0.634158101939068,1.09394961803644,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0.951576261675644,0.657727735628491,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,1.30905207102113,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p17@GRIK2 | |short_description=p17@GRIK2 | ||
}} | }} |
Latest revision as of 12:11, 19 September 2015
Short description: | p17@GRIK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_GRIK2_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 56bp_to_ENST00000358361_5end |
EntrezGene: | GRIK2 |
HGNC: | 4580 |
UniProt: | G3XAD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data