FFCP PHASE1:Hg19::chr3:69812877..69812886,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4286 | |EntrezGene=4286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |HGNC=7105 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYR3,O75030 | |UniProt=Q8WYR3,O75030 | ||
|association_with_transcript=-75bp_to_ENST00000328528,ENST00000457080,NM_006722,uc003doa.2_5end | |||
|cluster_id=chr3:69812877..69812886,+ | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_22_at_MITF_5end | |||
|id=chr3:69812877..69812886,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;8.98e-21;10!UBERON:0007687;8.98e-21;10!UBERON:0003104;1.06e-15;31 | |||
|ontology_enrichment_disease=DOID:114!5.75e-10!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.59e-18!115;UBERON:0003103!1.32e-12!69;UBERON:0003135!6.21e-10!11;UBERON:0006554!8.86e-10!44;UBERON:0003127!1.28e-09!2;UBERON:0000489!1.41e-09!32;UBERON:0001008!1.63e-09!45;UBERON:0002113!2.86e-09!27;UBERON:0003918!2.86e-09!27;UBERON:0005095!2.86e-09!27;UBERON:0007687!2.86e-09!27;UBERON:0003101!8.02e-09!22;UBERON:0000079!8.02e-09!22;UBERON:0006947!5.66e-07!3;UBERON:0004054!5.66e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;5.12e-50;1!UBERON:0000026;5.12e-50;1!UBERON:0008784;5.12e-50;1!UBERON:0006058;5.12e-50;1!UBERON:0003663;5.12e-50;1!UBERON:0004256;5.12e-50;1!UBERON:0004708;5.12e-50;1!UBERON:0002101;5.12e-50;1!UBERON:0004709;5.12e-50;1!UBERON:0002529;5.12e-50;1!UBERON:0010538;5.12e-50;1!UBERON:0003661;5.12e-50;1!UBERON:0010890;5.12e-50;1!UBERON:0002471;5.12e-50;1!UBERON:0001383;5.12e-50;1!UBERON:0010758;5.12e-50;1!UBERON:0010707;5.12e-50;1!UBERON:0000978;5.12e-50;1!UBERON:0002103;5.12e-50;1!UBERON:0001665;5.12e-50;1!UBERON:0003823;5.12e-50;1!UBERON:0000154;5.12e-50;1!UBERON:0010709;5.12e-50;1!UBERON:0005090;8.10e-26;2!UBERON:0001630;8.10e-26;2!UBERON:0002113;2.61e-09;24!UBERON:0011143;2.61e-09;24!UBERON:0000489;7.03e-08;29!UBERON:0006554;1.19e-07;30!UBERON:0001008;1.19e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.99e-50,1;UBERON:0001389,3.99e-50,1;UBERON:0000026,3.99e-50,1;UBERON:0008784,3.99e-50,1;UBERON:0006058,3.99e-50,1;UBERON:0003663,3.99e-50,1;UBERON:0004256,3.99e-50,1;UBERON:0004708,3.99e-50,1;UBERON:0002101,3.99e-50,1;UBERON:0004709,3.99e-50,1;UBERON:0002529,3.99e-50,1;UBERON:0010538,3.99e-50,1;UBERON:0003661,3.99e-50,1;UBERON:0010890,3.99e-50,1;UBERON:0002471,3.99e-50,1;UBERON:0001383,3.99e-50,1;UBERON:0004357,3.99e-50,1;UBERON:0004347,3.99e-50,1;UBERON:0005420,3.99e-50,1;UBERON:0005732,3.99e-50,1;UBERON:0010758,3.99e-50,1;UBERON:0010707,3.99e-50,1;UBERON:0000978,3.99e-50,1;UBERON:0002103,3.99e-50,1;UBERON:0001665,3.99e-50,1;UBERON:0003823,3.99e-50,1;UBERON:0000154,3.99e-50,1;UBERON:0010709,3.99e-50,1;UBERON:0005733,3.99e-50,1;UBERON:0005730,3.99e-50,1;UBERON:0005090,7.14e-26,2;UBERON:0001630,7.14e-26,2;UBERON:0002113,1.15e-08,26;UBERON:0003918,1.15e-08,26;UBERON:0011143,1.15e-08,26;UBERON:0005095,1.15e-08,26;UBERON:0007687,1.15e-08,26;UBERON:0000489,1.99e-07,31 | |||
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| ||
|short_description=p22@MITF | |||
}} | }} |
Latest revision as of 12:15, 19 September 2015
Short description: | p22@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_MITF_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | -75bp_to_ENST00000328528, ENST00000457080, NM_006722, uc003doa.2_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | Q8WYR3O75030 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 3.99e-50 | 1 |
soleus muscle | 3.99e-50 | 1 |
appendage | 3.99e-50 | 1 |
lower limb segment | 3.99e-50 | 1 |
multi-limb segment region | 3.99e-50 | 1 |
hindlimb muscle | 3.99e-50 | 1 |
hindlimb zeugopod muscle | 3.99e-50 | 1 |
paired limb/fin | 3.99e-50 | 1 |
limb | 3.99e-50 | 1 |
pelvic appendage | 3.99e-50 | 1 |
limb segment | 3.99e-50 | 1 |
paired limb/fin segment | 3.99e-50 | 1 |
limb muscle | 3.99e-50 | 1 |
pelvic complex muscle | 3.99e-50 | 1 |
zeugopod | 3.99e-50 | 1 |
muscle of leg | 3.99e-50 | 1 |
paired limb/fin bud | 3.99e-50 | 1 |
limb bud | 3.99e-50 | 1 |
pelvic appendage bud | 3.99e-50 | 1 |
limb/fin field | 3.99e-50 | 1 |
subdivision of organism along appendicular axis | 3.99e-50 | 1 |
appendage girdle complex | 3.99e-50 | 1 |
leg | 3.99e-50 | 1 |
hindlimb | 3.99e-50 | 1 |
triceps surae | 3.99e-50 | 1 |
hindlimb zeugopod | 3.99e-50 | 1 |
posterior region of body | 3.99e-50 | 1 |
pelvic complex | 3.99e-50 | 1 |
limb field | 3.99e-50 | 1 |
hindlimb/pelvic fin field | 3.99e-50 | 1 |
muscle structure | 7.14e-26 | 2 |
muscle organ | 7.14e-26 | 2 |
kidney | 1.15e-08 | 26 |
kidney mesenchyme | 1.15e-08 | 26 |
upper urinary tract | 1.15e-08 | 26 |
kidney rudiment | 1.15e-08 | 26 |
kidney field | 1.15e-08 | 26 |
cavitated compound organ | 1.99e-07 | 31 |