FFCP PHASE1:Hg19::chr6:102517021..102517024,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2898 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4580 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-27bp_to_S75105_5end | |||
|cluster_id=chr6:102517021..102517024,+ | |||
|description=CAGE_peak_10_at_GRIK2_5end | |||
|id=chr6:102517021..102517024,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;8.12e-12;3!CL:0002616;2.76e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.29e-11,3;CL:0002616,1.84e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.51e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.70e-48!57;UBERON:0005068!2.70e-48!57;UBERON:0006241!2.70e-48!57;UBERON:0007135!2.70e-48!57;UBERON:0002616!4.35e-39!59;UBERON:0002780!1.36e-37!41;UBERON:0001890!1.36e-37!41;UBERON:0006240!1.36e-37!41;UBERON:0000955!1.35e-36!69;UBERON:0006238!1.35e-36!69;UBERON:0003080!1.81e-36!42;UBERON:0002020!4.98e-36!34;UBERON:0003528!4.98e-36!34;UBERON:0001017!6.48e-36!82;UBERON:0003075!1.36e-35!86;UBERON:0007284!1.36e-35!86;UBERON:0001869!3.04e-35!32;UBERON:0001893!4.95e-35!34;UBERON:0002346!5.99e-35!90;UBERON:0002791!6.22e-34!33;UBERON:0005743!1.34e-33!86;UBERON:0000073!2.28e-32!94;UBERON:0001016!2.28e-32!94;UBERON:0002619!9.86e-29!22;UBERON:0001950!3.82e-25!20;UBERON:0003056!4.25e-25!61;UBERON:0000956!1.16e-24!25;UBERON:0000203!1.16e-24!25;UBERON:0007023!9.29e-23!115;UBERON:0000924!1.39e-18!173;UBERON:0006601!1.39e-18!173;UBERON:0004121!1.66e-18!169;UBERON:0000033!5.93e-18!123;UBERON:0000153!1.60e-16!129;UBERON:0007811!1.60e-16!129;UBERON:0000025!5.21e-15!194;UBERON:0002420!3.71e-13!9;UBERON:0007245!3.71e-13!9;UBERON:0010009!3.71e-13!9;UBERON:0010011!3.71e-13!9;UBERON:0000454!3.71e-13!9;UBERON:0002308!6.48e-13!9;UBERON:0000125!6.48e-13!9;UBERON:0003076!1.38e-12!15;UBERON:0003057!1.38e-12!15;UBERON:0001871!1.25e-11!7;UBERON:0000064!1.36e-11!219;UBERON:0000200!1.21e-10!6;UBERON:0000349!4.91e-10!5;UBERON:0009663!1.05e-09!7;UBERON:0004111!3.38e-09!241;UBERON:0001872!7.21e-09!5;UBERON:0004733!1.49e-08!12;UBERON:0002028!1.49e-08!12;UBERON:0007277!1.49e-08!12;UBERON:0003688!2.82e-08!6;UBERON:0002358!2.82e-08!6;UBERON:0003684!2.82e-08!6;UBERON:0001178!2.82e-08!6;UBERON:0000369!4.37e-08!4;UBERON:0002435!4.37e-08!4;UBERON:0000204!4.37e-08!4;UBERON:0010082!4.37e-08!4;UBERON:0000483!6.61e-08!309;UBERON:0000477!7.97e-08!286;UBERON:0000475!8.06e-08!365;UBERON:0004732!9.01e-08!13;UBERON:0000119!1.10e-07!312;UBERON:0002298!2.24e-07!8;UBERON:0005383!5.77e-07!3;UBERON:0005382!5.77e-07!3;UBERON:0002771!8.28e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;9.35e-42;34!UBERON:0002020;9.35e-42;34!UBERON:0002791;4.45e-41;32!UBERON:0002619;1.61e-40;22!UBERON:0001869;9.63e-40;32!UBERON:0000956;1.21e-35;25!UBERON:0000203;1.21e-35;25!UBERON:0001893;2.41e-32;34!UBERON:0002780;1.04e-29;41!UBERON:0001890;1.04e-29;41!UBERON:0001950;1.07e-29;20!UBERON:0000073;3.24e-25;53!UBERON:0002616;3.24e-25;53!UBERON:0001954;2.33e-17;2!UBERON:0003022;2.33e-17;2!UBERON:0002421;2.33e-17;2!UBERON:0002600;2.33e-17;2!UBERON:0002702;7.57e-17;2!UBERON:0000955;1.03e-15;68!UBERON:0002021;2.04e-15;5!UBERON:0000349;3.56e-15;5!UBERON:0002420;2.51e-14;9!UBERON:0000125;2.51e-14;9!UBERON:0007245;2.51e-14;9!UBERON:0002308;2.51e-14;9!UBERON:0010009;2.51e-14;9!UBERON:0010011;2.51e-14;9!UBERON:0000454;2.51e-14;9!UBERON:0003688;1.09e-12;6!UBERON:0002358;1.09e-12;6!UBERON:0003684;1.09e-12;6!UBERON:0001178;1.09e-12;6!UBERON:0000200;1.73e-12;6!UBERON:0001017;9.40e-12;75!UBERON:0001870;1.51e-11;3!UBERON:0005383;1.51e-11;3!UBERON:0005382;1.51e-11;3!UBERON:0009663;8.80e-11;7!UBERON:0001016;1.07e-10;83!UBERON:0001874;2.76e-09;1!UBERON:0000369;6.99e-09;4!UBERON:0002435;6.99e-09;4!UBERON:0000204;6.99e-09;4!UBERON:0004457;1.26e-08;9!UBERON:0000042;1.26e-08;9!UBERON:0002680;1.70e-08;9!UBERON:0001895;1.70e-08;9!UBERON:0001872;1.97e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,8.06e-49,34;UBERON:0002020,8.06e-49,34;UBERON:0002791,3.03e-45,32;UBERON:0001869,3.03e-45,32;UBERON:0000073,6.02e-45,53;UBERON:0002616,6.02e-45,53;UBERON:0001893,1.60e-42,34;UBERON:0001049,2.02e-42,56;UBERON:0005068,2.02e-42,56;UBERON:0006241,2.02e-42,56;UBERON:0007135,2.02e-42,56;UBERON:0002619,1.40e-40,22;UBERON:0002780,1.88e-40,41;UBERON:0001890,1.88e-40,41;UBERON:0003080,1.88e-40,41;UBERON:0006240,1.88e-40,41;UBERON:0000956,1.07e-35,25;UBERON:0000203,1.07e-35,25;UBERON:0000955,5.72e-34,68;UBERON:0006238,5.72e-34,68;UBERON:0001950,1.06e-29,20;UBERON:0001017,3.69e-28,81;UBERON:0003075,3.69e-28,82;UBERON:0007284,3.69e-28,82;UBERON:0002346,1.01e-26,86;UBERON:0003056,1.48e-26,61;UBERON:0001016,4.26e-25,89;UBERON:0010371,1.35e-21,104;UBERON:0001954,1.76e-17,2;UBERON:0003022,1.76e-17,2;UBERON:0002421,1.76e-17,2;UBERON:0002600,1.76e-17,2;UBERON:0002702,5.08e-17,2;UBERON:0010314,2.24e-16,132;UBERON:0000349,1.95e-15,5;UBERON:0002021,2.15e-15,5;UBERON:0002420,1.44e-14,9;UBERON:0007245,1.44e-14,9;UBERON:0010009,1.44e-14,9;UBERON:0010011,1.44e-14,9;UBERON:0000454,1.44e-14,9;UBERON:0000125,2.43e-14,9;UBERON:0002308,2.43e-14,9;UBERON:0004121,2.71e-13,171;UBERON:0000924,2.71e-13,171;UBERON:0006601,2.71e-13,171;UBERON:0007023,4.28e-13,114;UBERON:0003688,1.42e-12,6;UBERON:0002358,1.42e-12,6;UBERON:0003684,1.42e-12,6;UBERON:0001178,1.42e-12,6;UBERON:0000200,1.66e-12,6;UBERON:0005383,1.04e-11,3;UBERON:0005382,1.04e-11,3;UBERON:0001870,1.16e-11,3;UBERON:0009663,6.96e-11,7;UBERON:0000025,2.83e-10,192;UBERON:0001874,2.55e-09,1;UBERON:0000369,5.30e-09,4;UBERON:0002435,5.30e-09,4;UBERON:0000204,5.30e-09,4;UBERON:0010082,5.30e-09,4;UBERON:0002680,1.84e-08,9;UBERON:0001895,1.84e-08,9;UBERON:0010092,1.84e-08,9;UBERON:0011216,3.03e-08,223;UBERON:0004111,1.42e-07,240;UBERON:0001872,2.59e-07,5 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,1.0007329835313,2.23480547213644,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0.561320188866147,0,0.511707249066704,1.28683136914886,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.96937182974718,0,0,0,0,0,0.251932747854276,0.20453736500431,0,0.311039587661807,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.689486746482929,0.583209226766509,0.347249989866585,1.77148277162768,0.964771509003264,0,1.10579259931225,1.77328571372128,0.87754158861589,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0,0,0.067401132980677,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.0633107959558787,0,0.160317640503067,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,1.20084057741958,0.684526894459965,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,3.18091875923721,1.49823746722733,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.05786081394152,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.732157589411779,1.1267183763585,0.573409195690071,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0.345430341731199,0,1.10606748921385,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0.639471856518258,0,0.471797825567689,0,0.169732529954025,0,0,0,0,0,0,0,0,0.128458450192919,0,1.11743701340006,2.2562800066483,3.27693205088234,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,1.03343398250592,0.0634158101939068,2.18789923607288,0,0,0,0,2.14280734351315,0.672567444437648,0,0.227662191351298,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,1.25692471932802,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39265542612958,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0.8453114551668,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0.190941474834495,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p10@GRIK2 | |||
}} |
Latest revision as of 12:35, 19 September 2015
Short description: | p10@GRIK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GRIK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_S75105_5end |
EntrezGene: | GRIK2 |
HGNC: | 4580 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.29e-11 | 3 |
perirenal adipocyte cell | 1.84e-09 | 1 |