FFCP PHASE1:Hg19::chr19:51327034..51327056,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3816 | |EntrezGene=3816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6357 | |HGNC=6357 | ||
|TSSclassifier=strong | |||
|UniProt=P06870,F8WAM8,Q6T776 | |UniProt=P06870,F8WAM8,Q6T776 | ||
|association_with_transcript=0bp_to_ENST00000301420,ENST00000448701,NM_002257,uc002ptk.1,uc010ycg.1_5end | |association_with_transcript=0bp_to_ENST00000301420,ENST00000448701,NM_002257,uc002ptk.1,uc010ycg.1_5end | ||
|cluster_id=chr19:51327034..51327056,- | |||
|coexpression_cluster_id=C27 | |coexpression_cluster_id=C27 | ||
|description=CAGE_peak_1_at_KLK1_5end | |description=CAGE_peak_1_at_KLK1_5end | ||
|id=chr19:51327034..51327056,- | |id=chr19:51327034..51327056,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.90e-08;1!UBERON:0008801;2.35e-08;1!UBERON:0000358;3.11e-08;1!UBERON:0001045;4.40e-08;1 | |||
|ontology_enrichment_disease=DOID:114!5.40e-08!2 | |ontology_enrichment_disease=DOID:114!5.40e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:178;9.61e-08;1!DOID:326;9.61e-08;1!DOID:3978;9.61e-08;1!DOID:3394;9.61e-08;1!DOID:5844;9.61e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,8.69e-08,1;DOID:326,8.69e-08,1;DOID:3978,8.69e-08,1;DOID:3394,8.69e-08,1;DOID:5844,8.69e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!4.21e-16!35;UBERON:0007023!2.21e-15!115;UBERON:0000160!2.19e-13!27;UBERON:0004921!9.43e-12!129;UBERON:0004185!9.43e-12!129;UBERON:0001007!1.14e-11!155;UBERON:0001555!1.14e-11!155;UBERON:0007026!1.14e-11!155;UBERON:0004119!3.87e-10!169;UBERON:0000925!3.87e-10!169;UBERON:0006595!3.87e-10!169;UBERON:0001829!9.23e-09!2;UBERON:0000059!3.41e-08!11;UBERON:0003127!6.90e-08!2;UBERON:0002294!1.30e-07!7;UBERON:0001173!1.30e-07!7;UBERON:0004912!1.30e-07!7;UBERON:0000341!1.37e-07!2;UBERON:0000078!8.01e-07!18;UBERON:0001155!8.47e-07!9 | |ontology_enrichment_uberon=UBERON:0005409!4.21e-16!35;UBERON:0007023!2.21e-15!115;UBERON:0000160!2.19e-13!27;UBERON:0004921!9.43e-12!129;UBERON:0004185!9.43e-12!129;UBERON:0001007!1.14e-11!155;UBERON:0001555!1.14e-11!155;UBERON:0007026!1.14e-11!155;UBERON:0004119!3.87e-10!169;UBERON:0000925!3.87e-10!169;UBERON:0006595!3.87e-10!169;UBERON:0001829!9.23e-09!2;UBERON:0000059!3.41e-08!11;UBERON:0003127!6.90e-08!2;UBERON:0002294!1.30e-07!7;UBERON:0001173!1.30e-07!7;UBERON:0004912!1.30e-07!7;UBERON:0000341!1.37e-07!2;UBERON:0000078!8.01e-07!18;UBERON:0001155!8.47e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.50e-23;17!UBERON:0004921;2.67e-22;33!UBERON:0005409;1.21e-17;22!UBERON:0000059;3.77e-15;11!UBERON:0001829;4.25e-15;2!UBERON:0002108;7.53e-13;4!UBERON:0001155;2.55e-12;9!UBERON:0001044;3.52e-11;6!UBERON:0003293;3.52e-11;6!UBERON:0003294;3.52e-11;6!UBERON:0010047;3.52e-11;6!UBERON:0003408;3.52e-11;6!UBERON:0000167;3.52e-11;6!UBERON:0001555;7.16e-11;54!UBERON:0001723;9.80e-10;3!UBERON:0001033;9.80e-10;3!UBERON:0001736;1.90e-08;1!UBERON:0001831;2.35e-08;1!UBERON:0001567;2.35e-08;1!UBERON:0000165;3.24e-08;28!UBERON:0007029;4.40e-08;1!UBERON:0001154;4.40e-08;1!UBERON:0001153;4.40e-08;1!UBERON:0009854;4.40e-08;1!UBERON:0002372;9.61e-08;1!UBERON:0001961;9.61e-08;1!UBERON:0001744;9.61e-08;1!UBERON:0001042;9.61e-08;1!UBERON:0001735;9.61e-08;1!UBERON:0001007;1.15e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.84e-23,17;UBERON:0005409,1.82e-15,25;UBERON:0000059,3.89e-15,11;UBERON:0001829,4.26e-15,2;UBERON:0002108,7.68e-13,4;UBERON:0001155,2.51e-12,9;UBERON:0007023,7.12e-12,114;UBERON:0001044,3.52e-11,6;UBERON:0003293,3.52e-11,6;UBERON:0003294,3.52e-11,6;UBERON:0010047,3.52e-11,6;UBERON:0000167,3.52e-11,6;UBERON:0000166,1.43e-10,22;UBERON:0001723,1.03e-09,3;UBERON:0001033,1.03e-09,3;UBERON:0010056,1.03e-09,3;UBERON:0004921,1.03e-09,118;UBERON:0001007,1.37e-08,145;UBERON:0001555,1.37e-08,145;UBERON:0007026,1.37e-08,145;UBERON:0001736,1.91e-08,1;UBERON:0006298,1.91e-08,1;UBERON:0001831,2.35e-08,1;UBERON:0001567,2.35e-08,1;UBERON:0008801,2.35e-08,1;UBERON:0001154,4.11e-08,1;UBERON:0001153,4.11e-08,1;UBERON:0001045,4.11e-08,1;UBERON:0007029,4.40e-08,1;UBERON:0000165,6.88e-08,29;UBERON:0000930,6.88e-08,29;UBERON:0002372,1.21e-07,1;UBERON:0001961,1.21e-07,1;UBERON:0001744,1.21e-07,1;UBERON:0001735,1.21e-07,1;UBERON:0004119,1.67e-07,160;UBERON:0000925,1.67e-07,160;UBERON:0006595,1.67e-07,160;UBERON:0003408,7.03e-07,10 | |||
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| ||
|short_description=p1@KLK1 | |short_description=p1@KLK1 | ||
}} | }} |
Latest revision as of 13:12, 19 September 2015
Short description: | p1@KLK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLK1_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 0bp_to_ENST00000301420, ENST00000448701, NM_002257, uc002ptk.1, uc010ycg.1_5end |
EntrezGene: | KLK1 |
HGNC: | 6357 |
UniProt: | P06870F8WAM8Q6T776 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 7.84e-23 | 17 |
gastrointestinal system | 1.82e-15 | 25 |
large intestine | 3.89e-15 | 11 |
major salivary gland | 4.26e-15 | 2 |
small intestine | 7.68e-13 | 4 |
colon | 2.51e-12 | 9 |
adult organism | 7.12e-12 | 114 |
saliva-secreting gland | 3.52e-11 | 6 |
gland of oral region | 3.52e-11 | 6 |
gland of foregut | 3.52e-11 | 6 |
oral gland | 3.52e-11 | 6 |
oral cavity | 3.52e-11 | 6 |
oral opening | 1.43e-10 | 22 |
tongue | 1.03e-09 | 3 |
gustatory system | 1.03e-09 | 3 |
future tongue | 1.03e-09 | 3 |
subdivision of digestive tract | 1.03e-09 | 118 |
digestive system | 1.37e-08 | 145 |
digestive tract | 1.37e-08 | 145 |
primitive gut | 1.37e-08 | 145 |
submandibular gland | 1.91e-08 | 1 |
submandibular gland primordium | 1.91e-08 | 1 |
parotid gland | 2.35e-08 | 1 |
cheek | 2.35e-08 | 1 |
parotid gland primordium | 2.35e-08 | 1 |
vermiform appendix | 4.11e-08 | 1 |
caecum | 4.11e-08 | 1 |
midgut | 4.11e-08 | 1 |
surface | 4.40e-08 | 1 |
mouth | 6.88e-08 | 29 |
stomodeum | 6.88e-08 | 29 |
tonsil | 1.21e-07 | 1 |
mucosa-associated lymphoid tissue | 1.21e-07 | 1 |
lymphoid tissue | 1.21e-07 | 1 |
tonsillar ring | 1.21e-07 | 1 |
endoderm-derived structure | 1.67e-07 | 160 |
endoderm | 1.67e-07 | 160 |
presumptive endoderm | 1.67e-07 | 160 |
gland of gut | 7.03e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 8.69e-08 | 1 |
ischemia | 8.69e-08 | 1 |
extrinsic cardiomyopathy | 8.69e-08 | 1 |
myocardial ischemia | 8.69e-08 | 1 |
myocardial infarction | 8.69e-08 | 1 |