FFCP PHASE1:Hg19::chr1:8586084..8586100,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:8586084..8586100,- to FFCP PHASE1:Hg19::chr1:8586084..8586100,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=473 | |EntrezGene=473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |HGNC=9965 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000464972,ENST00000507012_5end | |||
|cluster_id=chr1:8586084..8586100,- | |||
|description=CAGE_peak_20_at_RERE_5end | |||
|id=chr1:8586084..8586100,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.03e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.15e-34!115;UBERON:0001049!6.86e-18!57;UBERON:0005068!6.86e-18!57;UBERON:0006241!6.86e-18!57;UBERON:0007135!6.86e-18!57;UBERON:0002616!8.79e-15!59;UBERON:0000955!3.93e-14!69;UBERON:0006238!3.93e-14!69;UBERON:0003075!1.48e-13!86;UBERON:0007284!1.48e-13!86;UBERON:0000153!8.24e-13!129;UBERON:0007811!8.24e-13!129;UBERON:0001017!1.52e-12!82;UBERON:0005743!1.96e-12!86;UBERON:0000033!2.03e-12!123;UBERON:0002346!2.24e-12!90;UBERON:0003080!6.53e-12!42;UBERON:0002780!1.78e-11!41;UBERON:0001890!1.78e-11!41;UBERON:0006240!1.78e-11!41;UBERON:0004121!5.31e-10!169;UBERON:0000073!5.35e-10!94;UBERON:0001016!5.35e-10!94;UBERON:0001893!6.89e-10!34;UBERON:0002020!8.76e-10!34;UBERON:0003528!8.76e-10!34;UBERON:0000924!2.16e-09!173;UBERON:0006601!2.16e-09!173;UBERON:0002791!2.72e-09!33;UBERON:0003056!4.55e-09!61;UBERON:0001869!8.63e-09!32;UBERON:0001950!5.05e-08!20;UBERON:0002619!5.68e-08!22;UBERON:0003076!1.74e-07!15;UBERON:0003057!1.74e-07!15;UBERON:0002298!9.28e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;6.02e-32;53!UBERON:0002616;6.02e-32;53!UBERON:0002780;6.99e-29;41!UBERON:0001890;6.99e-29;41!UBERON:0001893;3.03e-27;34!UBERON:0003528;9.45e-26;34!UBERON:0002020;9.45e-26;34!UBERON:0001869;6.57e-25;32!UBERON:0002791;6.91e-25;32!UBERON:0002619;4.42e-23;22!UBERON:0001950;9.21e-22;20!UBERON:0000956;5.20e-20;25!UBERON:0000203;5.20e-20;25!UBERON:0007023;2.90e-16;114!UBERON:0002420;1.08e-15;9!UBERON:0007245;1.08e-15;9!UBERON:0010009;1.08e-15;9!UBERON:0010011;1.08e-15;9!UBERON:0000454;1.08e-15;9!UBERON:0001017;2.54e-15;75!UBERON:0000955;4.55e-15;68!UBERON:0001016;4.49e-13;83!UBERON:0000200;2.08e-12;6!UBERON:0002298;2.08e-12;6!UBERON:0004733;7.21e-12;12!UBERON:0002028;7.21e-12;12!UBERON:0000125;3.41e-11;9!UBERON:0002308;3.41e-11;9!UBERON:0004732;7.18e-11;13!UBERON:0001871;7.21e-11;6!UBERON:0000349;1.23e-10;5!UBERON:0009663;2.61e-10;7!UBERON:0001896;8.15e-10;3!UBERON:0001870;8.15e-10;3!UBERON:0005290;8.15e-10;3!UBERON:0003296;3.63e-08;4!UBERON:0010133;3.63e-08;4!UBERON:0001894;7.81e-08;7!UBERON:0000007;8.72e-08;2!UBERON:0001876;1.18e-07;2!UBERON:0002702;3.14e-07;2!UBERON:0002771;8.06e-07;2!UBERON:0001875;8.06e-07;2!UBERON:0006514;8.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.04e-55,114;UBERON:0001049,6.13e-51,56;UBERON:0005068,6.13e-51,56;UBERON:0006241,6.13e-51,56;UBERON:0007135,6.13e-51,56;UBERON:0000073,1.08e-50,53;UBERON:0002616,1.08e-50,53;UBERON:0000955,1.45e-39,68;UBERON:0006238,1.45e-39,68;UBERON:0002780,3.01e-39,41;UBERON:0001890,3.01e-39,41;UBERON:0003080,3.01e-39,41;UBERON:0006240,3.01e-39,41;UBERON:0003075,1.10e-36,82;UBERON:0007284,1.10e-36,82;UBERON:0002346,1.47e-34,86;UBERON:0001017,2.88e-34,81;UBERON:0001893,9.40e-33,34;UBERON:0001016,5.20e-30,89;UBERON:0003528,1.85e-29,34;UBERON:0002020,1.85e-29,34;UBERON:0001869,1.58e-28,32;UBERON:0002791,3.08e-28,32;UBERON:0010371,5.15e-27,104;UBERON:0003056,1.12e-26,61;UBERON:0010314,7.80e-24,132;UBERON:0002619,3.78e-23,22;UBERON:0001950,7.84e-22,20;UBERON:0000956,4.54e-20,25;UBERON:0000203,4.54e-20,25;UBERON:0004121,9.77e-16,171;UBERON:0000924,9.77e-16,171;UBERON:0006601,9.77e-16,171;UBERON:0002420,2.33e-15,9;UBERON:0007245,2.33e-15,9;UBERON:0010009,2.33e-15,9;UBERON:0010011,2.33e-15,9;UBERON:0000454,2.33e-15,9;UBERON:0002298,4.79e-13,6;UBERON:0000200,8.31e-13,6;UBERON:0003076,1.71e-12,15;UBERON:0003057,1.71e-12,15;UBERON:0004733,2.63e-12,12;UBERON:0002028,2.63e-12,12;UBERON:0007277,2.63e-12,12;UBERON:0000025,2.14e-11,192;UBERON:0004732,2.86e-11,13;UBERON:0000125,5.35e-11,9;UBERON:0002308,5.35e-11,9;UBERON:0001871,6.33e-11,6;UBERON:0000349,9.74e-11,5;UBERON:0011216,1.33e-10,223;UBERON:0001896,3.11e-10,3;UBERON:0005290,3.11e-10,3;UBERON:0010096,3.11e-10,3;UBERON:0004111,3.24e-10,240;UBERON:0001870,5.08e-10,3;UBERON:0009663,5.71e-10,7;UBERON:0003296,3.98e-08,4;UBERON:0010133,3.98e-08,4;UBERON:0000007,8.13e-08,2;UBERON:0001894,8.25e-08,7;UBERON:0006222,8.25e-08,7;UBERON:0001876,1.02e-07,2;UBERON:0002702,2.12e-07,2;UBERON:0000483,2.48e-07,306;UBERON:0000119,3.60e-07,309;UBERON:0002771,6.40e-07,2 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0.655324116390517,0.527533956456907,0.247532705920093,0,0,0,0,0,0.61560529038394,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0,0.919421224478927,0,0,0.46480320348181,0.426507697462265,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0,0,1.09227722252426,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0.954053754535364,0.569212969109448,0,0.764546456250458,0,0,0,0.786839080455332,0.393010762749165,0.205601498999509,0.501559486172034,0.977766799900771,0.946895611469467,0,0.111410456885174,0,0,0.812411591295047,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0.741432815810302,1.33770414044857,2.09071047609954,0.113309342697566,0.383220493601921,0.34362744548263,1.26509846009751,0,1.30216690771284,0,0.150575119077773,0.639933055772092,0,0.710331756132051,0.821127996921047,0.403213486449465,0.534880391567015,0.579297615531196,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0.087834785693126,2.03017567021455,0.728590576585084,0.741568885568859,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0.468642863667593,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0.619954687054593,0,0,0,0.718618141816238,0.336672227908132,0.125118519871964,0.554128230968366,0.438977620880838,0,0.150238058906597,0,0,1.06778694409284,0.211931901159562,0.600182192168805,0.412210116953756,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0.504867548488229,0.736399189138395,0,0.355009592516614,0.403008392910561,0.169560592310488,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0.474541238222193,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.277765335475589,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0.383382679165211,0,0.088048434013226,0.207328115540772,0.720599767084807,0.37872730027914,0,0.381988425558278,1.17217447210047,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0.514414748524284,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0,0.394061520403854,0,0,0.254094624222463,0,0,0,0,0,0,0,0.858840442033979,0,0,0,0.178428988797162,0.473107245101804,0.35142424497814,0.300946099727719,0,0,0,0,0.434418072340414,0,0.343143423810856,0,0.215714200818617,0.533637789017222,0,0,0.604780586659361,0,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0.241718899183244,0,0.184161977871793,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0.574265537996172,0,0,0.386682873168488,0.154048617114644,0.921022048356777,0.275673144969061,0.644521469209642,0.435050081742686,0,0.178064071293475,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0.869932992075073,0,0,0.372158369359667,0,0,0.255897791311334,0,0.318203247925937,0,0,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.633322905892992,0.987884678879706,0,0.349934720244983,0.48111056362756,0,0,0.470719003883896,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0,0.569647187174163,0.476463550915578,0.822724546172388,0,0.540031437238115,0,0,0.962479855263359,0.490080431962063,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,1.02555725490326,0,0,0,0.23874448473769,0.593929361665277,1.53580351049616,2.98244294329889,2.11004124615769,0.445234820091624,0,0,0.996239941255349,0.276283915531148,0.251932747854276,0.102268682502155,0,0,0.179736702294654,0,0.511572370226872,0.493217028184668,0,0,0,1.11321717794222,0,0,0,0.724999575434793,0.1137934482855,0,0.472775363535873,0,0,0.173624994933292,0,1.4471572635049,4.5774520895125,6.41359707601103,0.886642856860642,0.219385397153973,0,0.139423744278603,5.92516990479237,0,0.922255617552241,0.0897576444097721,0.434589487688032,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.442287822516696,1.22206028986725,0,0,0,1.55022605855557,0,0.468528891450678,0,0.391329237864179,0.728341138602278,1.18375320854817,0,0.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| ||
|short_description=p20@RERE | |||
}} | }} |
Latest revision as of 13:12, 19 September 2015
Short description: | p20@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_RERE_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000464972, ENST00000507012_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data