FFCP PHASE1:Hg19::chr6:6588316..6588329,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9450 | |EntrezGene=9450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16837 | |HGNC=16837 | ||
|TSSclassifier=strong | |||
|UniProt=O95711 | |UniProt=O95711 | ||
|association_with_transcript=-11bp_to_ENST00000379953_5end | |||
|cluster_id=chr6:6588316..6588329,+ | |||
|coexpression_cluster_id=C203 | |||
|description=CAGE_peak_3_at_LY86_5end | |||
|id=chr6:6588316..6588329,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.83e-23!172;CL:0000566!2.83e-23!172;CL:0000988!2.43e-21!182;CL:0002032!9.82e-21!165;CL:0000837!9.82e-21!165;CL:0000738!1.67e-16!140;CL:0000763!2.44e-16!112;CL:0000049!2.44e-16!112;CL:0002031!7.16e-16!124;CL:0002087!1.62e-15!119;CL:0002009!9.46e-14!65;CL:0000557!1.28e-13!71;CL:0000840!3.27e-12!5;CL:0001029!3.27e-12!5;CL:0002194!2.85e-11!63;CL:0000576!2.85e-11!63;CL:0000040!2.85e-11!63;CL:0000559!2.85e-11!63;CL:0000839!1.09e-09!70;CL:0000766!1.11e-09!76;CL:0000451!4.32e-09!10;CL:0000990!5.41e-08!8;CL:0000945!7.96e-08!24;CL:0000826!7.96e-08!24;CL:0000235!1.19e-07!10;CL:0001014!3.50e-07!2;CL:0001016!3.50e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000235;7.58e-75;6!CL:0002032;3.56e-19;1!CL:0000557;3.56e-19;1!CL:0001014;1.97e-10;2!CL:0001016;1.97e-10;2!CL:0000473;4.03e-10;39!CL:0000234;4.03e-10;39!CL:0002619;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,7.03e-75,6;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0000557,1.53e-16,67;CL:0002009,5.36e-14,61;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0002194,1.00e-10,59;CL:0000576,1.00e-10,59;CL:0000040,1.00e-10,59;CL:0000559,1.00e-10,59;CL:0001014,1.89e-10,2;CL:0001016,1.89e-10,2;CL:0000839,1.37e-09,66;CL:0000473,1.59e-09,48;CL:0000234,1.59e-09,48;CL:0000766,8.74e-09,72;CL:0002619,2.63e-07,3;CL:0002031,5.44e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!9.58e-09!51;DOID:0060083!9.58e-09!51;DOID:74!6.63e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.51e-17!112;UBERON:0002390!1.27e-16!102;UBERON:0003061!1.27e-16!102;UBERON:0002371!5.08e-14!80;UBERON:0001474!7.18e-14!86;UBERON:0002405!9.38e-14!115;UBERON:0004765!7.08e-11!101;UBERON:0001434!7.08e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.47e-14,76;UBERON:0001474,1.79e-13,82;UBERON:0004765,3.00e-12,90;UBERON:0002405,7.65e-12,93;UBERON:0002390,3.21e-11,98;UBERON:0003061,3.21e-11,98;UBERON:0001434,5.48e-11,100;UBERON:0002193,3.82e-10,108 | |||
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| ||
|short_description=p3@LY86 | |||
}} | }} |
Latest revision as of 13:16, 19 September 2015
Short description: | p3@LY86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LY86_5end |
Coexpression cluster: | C203_acute_NK_chronic_CD133_lymphoma_immature_Dendritic |
Association with transcript: | -11bp_to_ENST00000379953_5end |
EntrezGene: | LY86 |
HGNC: | 16837 |
UniProt: | O95711 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 7.03e-75 | 6 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
granulocyte monocyte progenitor cell | 1.53e-16 | 67 |
macrophage dendritic cell progenitor | 5.36e-14 | 61 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
monopoietic cell | 1.00e-10 | 59 |
monocyte | 1.00e-10 | 59 |
monoblast | 1.00e-10 | 59 |
promonocyte | 1.00e-10 | 59 |
CD1a-positive Langerhans cell | 1.89e-10 | 2 |
immature CD1a-positive Langerhans cell | 1.89e-10 | 2 |
myeloid lineage restricted progenitor cell | 1.37e-09 | 66 |
defensive cell | 1.59e-09 | 48 |
phagocyte | 1.59e-09 | 48 |
myeloid leukocyte | 8.74e-09 | 72 |
adult endothelial progenitor cell | 2.63e-07 | 3 |
hematopoietic lineage restricted progenitor cell | 5.44e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.47e-14 | 76 |
bone element | 1.79e-13 | 82 |
skeletal element | 3.00e-12 | 90 |
immune system | 7.65e-12 | 93 |
hematopoietic system | 3.21e-11 | 98 |
blood island | 3.21e-11 | 98 |
skeletal system | 5.48e-11 | 100 |
hemolymphoid system | 3.82e-10 | 108 |