FFCP PHASE1:Hg19::chr2:202316314..202316323,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=66008 | |EntrezGene=66008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13206 | |HGNC=13206 | ||
|TSSclassifier=strong | |||
|UniProt=O60296 | |UniProt=O60296 | ||
|association_with_transcript=0bp_to_NM_015049,uc002uyb.3,uc002uyc.2_5end | |association_with_transcript=0bp_to_NM_015049,uc002uyb.3,uc002uyc.2_5end | ||
|cluster_id=chr2:202316314..202316323,- | |||
|description=CAGE_peak_4_at_TRAK2_5end | |description=CAGE_peak_4_at_TRAK2_5end | ||
|id=chr2:202316314..202316323,- | |id=chr2:202316314..202316323,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002537;8.20e-12;5!CL:0000764;9.40e-08;2!CL:0000558;9.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,8.30e-12,5;CL:0000764,3.88e-08,2;CL:0000765,3.88e-08,2;CL:0000050,3.88e-08,2;CL:0000038,3.88e-08,2;CL:0000558,3.88e-08,2;CL:0000547,3.88e-08,2;CL:0000549,3.88e-08,2;CL:0000550,3.88e-08,2;CL:0000552,3.88e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.89e-14!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.96e-08;7!UBERON:0001876;9.40e-08;2!UBERON:0005162;9.40e-08;2!UBERON:0000122;9.40e-08;2!UBERON:0001829;9.40e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.97e-08,7;UBERON:0001876,3.61e-08,2;UBERON:0005162,9.88e-08,2;UBERON:0000122,9.88e-08,2;UBERON:0001829,1.09e-07,2;UBERON:0004871,2.26e-07,8;UBERON:0007023,5.21e-07,114 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,0,0.893922188854576,0.872338524100369,0,0,0.522371256399677,0,0,0.436882744260345,0.263766978228454,0.495065411840187,0.662794751455832,0,0,0,0,0.246242116153576,0.612002073732759,0,0,0.136874425072884,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0.56738522469114,1.24564449799115,0.251248665256743,0,0,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0.59675003159727,0,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0,0,0,0,0.786839080455332,0.786021525498329,1.64481199199607,0.668745981562712,0.977766799900771,1.4203434172042,0,0.445641827540694,1.17842362989935,0.886135578334485,0.541607727530031,0.512365278902701,0.520237390239513,0.657751618414705,1.10540007114339,0.869409257205157,0.889719378972363,0.802622484269139,0,0.339928028092699,0,0,0.253019692019503,0.95569624297229,0,0.950452044448374,0.602300476311091,1.27986611154418,0,1.18388626022008,0.821127996921047,0.201606743224732,0.267440195783507,0.579297615531196,0,0,0,0.361439152384566,0.50133791063589,0.289693037921647,0.795285947051099,0,0.189069634328136,0.443458794925128,0.790513071238134,0.392937226493138,0,0.370784442784429,0,0.522389211897802,0.132957960518865,0.238490624305342,0.571994910780128,0.74291500265913,0.39752481473341,0.860234595106124,0,0,1.25849830862972,0.550236083880135,0,0.516833518338658,0.35576626268671,0.33472061276467,0,0.760272105718513,0.488124115096339,0.367663080345869,0,1.07159673940896,0.673588117878509,0.450445921933289,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0.933633106199299,0.67355336034844,0.163461903113459,0.756787138224657,0,0,0,0,0.149448680551801,0.23486899728753,0.485618833104395,0.421352420106746,0.408308342509787,0.122834317311768,0.309977343527296,0,0.494533858557114,1.82032272387605,0,0.336672227908132,0.250237039743928,0.831192346452549,0,0.30648779579902,0.300476117813194,0.113432183160021,0.358779271377724,0.427114777637135,0.847727604638247,0.300091096084402,0.103052529238439,0,0.37223371266318,0.168776332241266,0.0974370051611986,0,0.368199594569197,0.484938170456436,0,0.503760491138201,1.01736355386293,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0.241011029883482,0.110293972732394,0.435758888184812,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0.245976877086227,0.343135620597051,0.219500570817251,0,0,0.185176890317059,0,0,2.88662684050547,0.231860809950154,0.234817388471643,0.144366447761074,0,0.951270761172991,0.790204397959275,0,0.246217006087397,0.234004265139238,0,1.87467667973554,0,0,0.0895585227028483,0,0.383382679165211,0,0.176096868026452,0,0.720599767084807,0.12624243342638,0.507983154337352,0,0,0,0.514137463516618,0.600686115687835,1.14330573052231,0.784917590417525,0,0.1466765716419,0.517086863031111,0,0,0.797814349754612,1.04007436911366,0.257207374262142,1.41849132023278,0.266422179016099,0.285955987316295,0,0,0.325736184293735,0,0,0.301439377059586,1.74306691720059,0.99972991182057,0,0,0,0.718874566474748,0,1.42636905040718,0,1.02738161275192,0.179060963239896,0.336255431980582,0.591092280605782,0.215627574859517,0.77005821767849,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0.12269149171914,0.500170521059677,0.271265023699736,0,0.178428988797162,0.315404830067869,0.468565659970853,0.601892199455438,2.27407504055985,0,0,0.553107505625109,0.260650843404249,0,0.343143423810856,0.82707210449155,0.215714200818617,0.533637789017222,0,0,0,0.496215615637554,0.153461973288062,0.561320188866147,0.896974044789907,1.02341449813341,0.321707842287215,0,0.616838775210622,0.177561725313127,0.328508624055237,0.519254429183621,0.581051892299796,0,0,0.184161977871793,0.114814448164607,0.182091168006717,0.655622074797121,0,0.308061348417659,0,0,0.211103257785751,0,0.340187410553031,0.863663664408557,0,0.541892875087706,0,0,0,0,1.31555925987561,1.8300481571743,0.512900250232778,0.328014645699706,0.325378394664303,0.412164046590889,0.0915694648183434,0.082509499920588,0,0,0,0.48335359146061,0.616194468458578,0.15350367472613,0.413509717453592,0.537101224341368,0.435050081742686,0.340906509664404,0.356128142586949,0,0.384380134730212,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0.18532421910392,0.429374660225974,0.744316738719335,0.632758849437452,1.90630193923825,0,0,0.636406495851874,0,1.07923474549989,0.274537029736055,0.353437207037059,0.404364963146632,0,0.421258456238981,0.48763373908959,0,0,0.818999468447914,0.424216295861138,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0.281695602532241,0.286822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| ||
|short_description=p4@TRAK2 | |short_description=p4@TRAK2 | ||
}} | }} |
Latest revision as of 13:19, 19 September 2015
Short description: | p4@TRAK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRAK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_015049, uc002uyb.3, uc002uyc.2_5end |
EntrezGene: | TRAK2 |
HGNC: | 13206 |
UniProt: | O60296 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 8.30e-12 | 5 |
erythroid lineage cell | 3.88e-08 | 2 |
erythroblast | 3.88e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 3.88e-08 | 2 |
erythroid progenitor cell | 3.88e-08 | 2 |
reticulocyte | 3.88e-08 | 2 |
proerythroblast | 3.88e-08 | 2 |
basophilic erythroblast | 3.88e-08 | 2 |
polychromatophilic erythroblast | 3.88e-08 | 2 |
orthochromatic erythroblast | 3.88e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.97e-08 | 7 |
amygdala | 3.61e-08 | 2 |
multi cell component structure | 9.88e-08 | 2 |
neuron projection bundle | 9.88e-08 | 2 |
major salivary gland | 1.09e-07 | 2 |
somatic layer of lateral plate mesoderm | 2.26e-07 | 8 |
adult organism | 5.21e-07 | 114 |