FFCP PHASE1:Hg19::chr6:70992919..70992935,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1297 | |EntrezGene=1297 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2217 | |HGNC=2217 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000320755_5end | |association_with_transcript=-7bp_to_ENST00000320755_5end | ||
|cluster_id=chr6:70992919..70992935,- | |||
|description=CAGE_peak_3_at_COL9A1_5end | |description=CAGE_peak_3_at_COL9A1_5end | ||
|id=chr6:70992919..70992935,- | |id=chr6:70992919..70992935,- | ||
|ontology_enrichment_celltype=CL:0002322!1.49e-12!5;CL:0000047!7.36e-07!8 | |ontology_enrichment_celltype=CL:0002322!1.49e-12!5;CL:0000047!7.36e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.30e-31;5!CL:0002321;1.40e-14;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.15e-31,5 | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.88e-08;1!UBERON:0000358;7.02e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.00e-55!57;UBERON:0005068!1.00e-55!57;UBERON:0006241!1.00e-55!57;UBERON:0007135!1.00e-55!57;UBERON:0001017!1.64e-52!82;UBERON:0005743!5.70e-52!86;UBERON:0000073!4.72e-48!94;UBERON:0001016!4.72e-48!94;UBERON:0003075!2.73e-45!86;UBERON:0007284!2.73e-45!86;UBERON:0002616!9.29e-45!59;UBERON:0000955!6.00e-43!69;UBERON:0006238!6.00e-43!69;UBERON:0002346!1.12e-42!90;UBERON:0002780!2.14e-41!41;UBERON:0001890!2.14e-41!41;UBERON:0006240!2.14e-41!41;UBERON:0003080!3.26e-40!42;UBERON:0002020!4.43e-38!34;UBERON:0003528!4.43e-38!34;UBERON:0001893!8.56e-38!34;UBERON:0002791!3.02e-36!33;UBERON:0001869!6.46e-34!32;UBERON:0003056!2.41e-33!61;UBERON:0000153!3.58e-29!129;UBERON:0007811!3.58e-29!129;UBERON:0004121!9.55e-28!169;UBERON:0000956!9.82e-28!25;UBERON:0000203!9.82e-28!25;UBERON:0000924!9.38e-27!173;UBERON:0006601!9.38e-27!173;UBERON:0002619!6.66e-26!22;UBERON:0000033!1.08e-25!123;UBERON:0001950!3.00e-25!20;UBERON:0007023!4.72e-24!115;UBERON:0003076!4.39e-16!15;UBERON:0003057!4.39e-16!15;UBERON:0002298!3.43e-13!8;UBERON:0001871!8.08e-13!7;UBERON:0000025!1.11e-12!194;UBERON:0002308!1.09e-11!9;UBERON:0000125!1.09e-11!9;UBERON:0000064!5.47e-11!219;UBERON:0004733!1.23e-10!12;UBERON:0002028!1.23e-10!12;UBERON:0007277!1.23e-10!12;UBERON:0000477!5.24e-10!286;UBERON:0004732!1.07e-09!13;UBERON:0004111!4.53e-09!241;UBERON:0000922!5.17e-09!612;UBERON:0000483!5.37e-09!309;UBERON:0000119!8.87e-09!312;UBERON:0002420!1.01e-08!9;UBERON:0007245!1.01e-08!9;UBERON:0010009!1.01e-08!9;UBERON:0010011!1.01e-08!9;UBERON:0000454!1.01e-08!9;UBERON:0000200!2.32e-08!6;UBERON:0000481!3.17e-08!347;UBERON:0009663!4.95e-08!7;UBERON:0002240!6.99e-08!3;UBERON:0006331!9.60e-08!3;UBERON:0001896!1.20e-07!3;UBERON:0005290!1.20e-07!3;UBERON:0010096!1.20e-07!3;UBERON:0000468!2.33e-07!659;UBERON:0000475!2.59e-07!365;UBERON:0000988!3.67e-07!3;UBERON:0001872!5.11e-07!5;UBERON:0002021!5.20e-07!5;UBERON:0002771!6.80e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.00e-55!57;UBERON:0005068!1.00e-55!57;UBERON:0006241!1.00e-55!57;UBERON:0007135!1.00e-55!57;UBERON:0001017!1.64e-52!82;UBERON:0005743!5.70e-52!86;UBERON:0000073!4.72e-48!94;UBERON:0001016!4.72e-48!94;UBERON:0003075!2.73e-45!86;UBERON:0007284!2.73e-45!86;UBERON:0002616!9.29e-45!59;UBERON:0000955!6.00e-43!69;UBERON:0006238!6.00e-43!69;UBERON:0002346!1.12e-42!90;UBERON:0002780!2.14e-41!41;UBERON:0001890!2.14e-41!41;UBERON:0006240!2.14e-41!41;UBERON:0003080!3.26e-40!42;UBERON:0002020!4.43e-38!34;UBERON:0003528!4.43e-38!34;UBERON:0001893!8.56e-38!34;UBERON:0002791!3.02e-36!33;UBERON:0001869!6.46e-34!32;UBERON:0003056!2.41e-33!61;UBERON:0000153!3.58e-29!129;UBERON:0007811!3.58e-29!129;UBERON:0004121!9.55e-28!169;UBERON:0000956!9.82e-28!25;UBERON:0000203!9.82e-28!25;UBERON:0000924!9.38e-27!173;UBERON:0006601!9.38e-27!173;UBERON:0002619!6.66e-26!22;UBERON:0000033!1.08e-25!123;UBERON:0001950!3.00e-25!20;UBERON:0007023!4.72e-24!115;UBERON:0003076!4.39e-16!15;UBERON:0003057!4.39e-16!15;UBERON:0002298!3.43e-13!8;UBERON:0001871!8.08e-13!7;UBERON:0000025!1.11e-12!194;UBERON:0002308!1.09e-11!9;UBERON:0000125!1.09e-11!9;UBERON:0000064!5.47e-11!219;UBERON:0004733!1.23e-10!12;UBERON:0002028!1.23e-10!12;UBERON:0007277!1.23e-10!12;UBERON:0000477!5.24e-10!286;UBERON:0004732!1.07e-09!13;UBERON:0004111!4.53e-09!241;UBERON:0000922!5.17e-09!612;UBERON:0000483!5.37e-09!309;UBERON:0000119!8.87e-09!312;UBERON:0002420!1.01e-08!9;UBERON:0007245!1.01e-08!9;UBERON:0010009!1.01e-08!9;UBERON:0010011!1.01e-08!9;UBERON:0000454!1.01e-08!9;UBERON:0000200!2.32e-08!6;UBERON:0000481!3.17e-08!347;UBERON:0009663!4.95e-08!7;UBERON:0002240!6.99e-08!3;UBERON:0006331!9.60e-08!3;UBERON:0001896!1.20e-07!3;UBERON:0005290!1.20e-07!3;UBERON:0010096!1.20e-07!3;UBERON:0000468!2.33e-07!659;UBERON:0000475!2.59e-07!365;UBERON:0000988!3.67e-07!3;UBERON:0001872!5.11e-07!5;UBERON:0002021!5.20e-07!5;UBERON:0002771!6.80e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.05e-14;49!UBERON:0000073;1.37e-12;53!UBERON:0002616;1.37e-12;53!UBERON:0002298;8.01e-10;6!UBERON:0002780;1.07e-09;41!UBERON:0001890;1.07e-09;41!UBERON:0001016;2.01e-09;83!UBERON:0001896;3.53e-09;3!UBERON:0005290;3.53e-09;3!UBERON:0004733;2.08e-08;12!UBERON:0002028;2.08e-08;12!UBERON:0004732;9.04e-08;13!UBERON:0002336;1.68e-07;1!UBERON:0002038;1.68e-07;1!UBERON:0011215;1.68e-07;1!UBERON:0001018;1.68e-07;1!UBERON:0009661;1.68e-07;1!UBERON:0002950;1.68e-07;1!UBERON:0002473;1.68e-07;1!UBERON:0005340;1.68e-07;1!UBERON:0003544;1.68e-07;1!UBERON:0005970;1.68e-07;1!UBERON:0002316;1.68e-07;1!UBERON:0001020;1.68e-07;1!UBERON:0001891;1.68e-07;1!UBERON:0002437;1.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.37e-18,56;UBERON:0005068,1.37e-18,56;UBERON:0006241,1.37e-18,56;UBERON:0007135,1.37e-18,56;UBERON:0001016,3.92e-18,89;UBERON:0001017,4.21e-18,81;UBERON:0000073,8.06e-17,53;UBERON:0002616,8.06e-17,53;UBERON:0000955,1.43e-14,68;UBERON:0006238,1.43e-14,68;UBERON:0003075,7.79e-14,82;UBERON:0007284,7.79e-14,82;UBERON:0002346,4.63e-13,86;UBERON:0002780,1.47e-10,41;UBERON:0001890,1.47e-10,41;UBERON:0003080,1.47e-10,41;UBERON:0006240,1.47e-10,41;UBERON:0010371,2.59e-10,104;UBERON:0003076,2.74e-10,15;UBERON:0003057,2.74e-10,15;UBERON:0002298,8.80e-10,6;UBERON:0001896,3.39e-09,3;UBERON:0005290,3.39e-09,3;UBERON:0010096,3.39e-09,3;UBERON:0004121,5.38e-09,171;UBERON:0000924,5.38e-09,171;UBERON:0006601,5.38e-09,171;UBERON:0010314,8.84e-09,132;UBERON:0004733,2.08e-08,12;UBERON:0002028,2.08e-08,12;UBERON:0007277,2.08e-08,12;UBERON:0003056,2.57e-08,61;UBERON:0003528,6.88e-08,34;UBERON:0002020,6.88e-08,34;UBERON:0001893,7.03e-08,34;UBERON:0004732,9.06e-08,13;UBERON:0002038,1.48e-07,1;UBERON:0009661,1.48e-07,1;UBERON:0002950,1.48e-07,1;UBERON:0001891,1.48e-07,1;UBERON:0009616,1.48e-07,1;UBERON:0010286,1.48e-07,1;UBERON:0002336,2.47e-07,1;UBERON:0011215,2.47e-07,1;UBERON:0001018,2.47e-07,1;UBERON:0002473,2.47e-07,1;UBERON:0005340,2.47e-07,1;UBERON:0003544,2.47e-07,1;UBERON:0005970,2.47e-07,1;UBERON:0002316,2.47e-07,1;UBERON:0001020,2.47e-07,1;UBERON:0002437,2.47e-07,1;UBERON:0011216,6.68e-07,223 | |||
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|short_description=p3@COL9A1 | |short_description=p3@COL9A1 | ||
}} | }} |
Latest revision as of 15:23, 19 September 2015
Short description: | p3@COL9A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COL9A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000320755_5end |
EntrezGene: | COL9A1 |
HGNC: | 2217 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.15e-31 | 5 |