FFCP PHASE1:Hg19::chr14:29241984..29242013,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:29241984..29242013,+ to FFCP PHASE1:Hg19::chr14:29241984..29242013,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19828 | |HGNC=19828 | ||
|TSSclassifier=strong | |||
|UniProt=F8VQW4,F8VZL1 | |UniProt=F8VQW4,F8VZL1 | ||
|association_with_transcript=0bp_to_ENST00000548213,ENST00000552957_5end | |||
|cluster_id=chr14:29241984..29242013,+ | |||
|coexpression_cluster_id=C3421 | |||
|description=CAGE_peak_1_at_C14orf23_5end | |||
|id=chr14:29241984..29242013,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.97e-13!25;CL:0000243!8.60e-10!15;CL:0000125!8.60e-10!15;CL:0000030!8.60e-10!15;CL:0000339!8.60e-10!15;CL:0000095!1.01e-09!17;CL:0000123!1.01e-09!17;CL:0000128!2.33e-07!7;CL:0000126!2.33e-07!7;CL:0000127!2.33e-07!7;CL:0002453!2.33e-07!7;CL:0000133!8.03e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.10e-15;25!CL:0000243;3.08e-11;15!CL:0000125;3.08e-11;15!CL:0000095;8.22e-10;17!CL:0000128;3.03e-08;7!CL:0000126;3.03e-08;7!CL:0000127;3.03e-08;7!CL:0002605;3.81e-08;3!CL:0000064;8.23e-08;3!CL:0000067;8.23e-08;3!CL:0005012;8.23e-08;3!CL:0002304;8.23e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.07e-15,25;CL:0000243,2.97e-11,15;CL:0000125,2.97e-11,15;CL:0000030,2.97e-11,15;CL:0000339,2.97e-11,15;CL:0000095,7.98e-10,17;CL:0000123,7.98e-10,17;CL:0000133,1.69e-08,59;CL:0000128,3.05e-08,7;CL:0000126,3.05e-08,7;CL:0000127,3.05e-08,7;CL:0002453,3.05e-08,7;CL:0002605,3.82e-08,3;CL:0000064,8.23e-08,3;CL:0000067,8.23e-08,3;CL:0005012,8.23e-08,3;CL:0002304,8.23e-08,3;CL:0000047,1.15e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000339;3.08e-11;15!UBERON:0006238;5.74e-09;10!UBERON:0006601;5.36e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.35e-43!82;UBERON:0005743!9.52e-42!86;UBERON:0002780!8.81e-41!41;UBERON:0001890!8.81e-41!41;UBERON:0006240!8.81e-41!41;UBERON:0001893!1.19e-40!34;UBERON:0000955!1.06e-39!69;UBERON:0006238!1.06e-39!69;UBERON:0002791!1.63e-39!33;UBERON:0003080!1.71e-39!42;UBERON:0000073!5.31e-39!94;UBERON:0001016!5.31e-39!94;UBERON:0001869!5.79e-39!32;UBERON:0003056!1.40e-37!61;UBERON:0002020!1.33e-35!34;UBERON:0003528!1.33e-35!34;UBERON:0002616!2.42e-33!59;UBERON:0003075!1.91e-32!86;UBERON:0007284!1.91e-32!86;UBERON:0002346!2.36e-31!90;UBERON:0000153!3.12e-31!129;UBERON:0007811!3.12e-31!129;UBERON:0001049!3.20e-30!57;UBERON:0005068!3.20e-30!57;UBERON:0006241!3.20e-30!57;UBERON:0007135!3.20e-30!57;UBERON:0000956!9.58e-30!25;UBERON:0000203!9.58e-30!25;UBERON:0000033!7.08e-29!123;UBERON:0004121!2.05e-26!169;UBERON:0000924!4.61e-26!173;UBERON:0006601!4.61e-26!173;UBERON:0002619!1.31e-25!22;UBERON:0001950!3.35e-23!20;UBERON:0000475!1.66e-17!365;UBERON:0002420!1.53e-12!9;UBERON:0007245!1.53e-12!9;UBERON:0010009!1.53e-12!9;UBERON:0010011!1.53e-12!9;UBERON:0000454!1.53e-12!9;UBERON:0007023!7.35e-12!115;UBERON:0000483!1.82e-10!309;UBERON:0000064!2.47e-10!219;UBERON:0009663!3.50e-10!7;UBERON:0000119!3.80e-10!312;UBERON:0000025!3.57e-09!194;UBERON:0000200!1.39e-08!6;UBERON:0001871!1.91e-08!7;UBERON:0000062!7.11e-08!511;UBERON:0000349!1.14e-07!5;UBERON:0002308!1.52e-07!9;UBERON:0000125!1.52e-07!9;UBERON:0001872!1.93e-07!5;UBERON:0000467!3.12e-07!625;UBERON:0000480!3.64e-07!626;UBERON:0000369!4.06e-07!4;UBERON:0002435!4.06e-07!4;UBERON:0000204!4.06e-07!4;UBERON:0010082!4.06e-07!4;UBERON:0002021!4.09e-07!5;UBERON:0000481!4.63e-07!347;UBERON:0000477!4.65e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.04e-55;32!UBERON:0001893;7.72e-53;34!UBERON:0002791;7.24e-52;32!UBERON:0003528;2.81e-47;34!UBERON:0002020;2.81e-47;34!UBERON:0000956;4.07e-46;25!UBERON:0000203;4.07e-46;25!UBERON:0002780;6.20e-42;41!UBERON:0001890;6.20e-42;41!UBERON:0002619;1.34e-39;22!UBERON:0001950;8.05e-36;20!UBERON:0000073;9.80e-26;53!UBERON:0002616;9.80e-26;53!UBERON:0000955;7.59e-23;68!UBERON:0001017;2.42e-22;75!UBERON:0001016;1.65e-18;83!UBERON:0002420;1.28e-15;9!UBERON:0007245;1.28e-15;9!UBERON:0010009;1.28e-15;9!UBERON:0010011;1.28e-15;9!UBERON:0000454;1.28e-15;9!UBERON:0000200;1.37e-12;6!UBERON:0009663;5.85e-12;7!UBERON:0000349;4.14e-11;5!UBERON:0001871;8.44e-11;6!UBERON:0001872;8.57e-11;5!UBERON:0000369;2.85e-10;4!UBERON:0002435;2.85e-10;4!UBERON:0000204;2.85e-10;4!UBERON:0002021;3.10e-10;5!UBERON:0000488;1.19e-09;4!UBERON:0007625;2.36e-09;11!UBERON:0000125;4.38e-09;9!UBERON:0002308;4.38e-09;9!UBERON:0005383;2.96e-08;3!UBERON:0005382;2.96e-08;3!UBERON:0001778;8.23e-08;3!UBERON:0001775;8.23e-08;3!UBERON:0001870;3.08e-07;3!UBERON:0011216;4.15e-07;132!UBERON:0001801;4.44e-07;14!UBERON:0010314;5.64e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.20e-60,32;UBERON:0001893,3.85e-60,34;UBERON:0002780,1.18e-58,41;UBERON:0001890,1.18e-58,41;UBERON:0003080,1.18e-58,41;UBERON:0006240,1.18e-58,41;UBERON:0002791,8.91e-57,32;UBERON:0003056,9.88e-55,61;UBERON:0001017,5.31e-54,81;UBERON:0003528,5.85e-53,34;UBERON:0002020,5.85e-53,34;UBERON:0001016,1.68e-51,89;UBERON:0000955,4.52e-49,68;UBERON:0006238,4.52e-49,68;UBERON:0000956,4.07e-46,25;UBERON:0000203,4.07e-46,25;UBERON:0000073,8.93e-46,53;UBERON:0002616,8.93e-46,53;UBERON:0003075,9.87e-44,82;UBERON:0007284,9.87e-44,82;UBERON:0001049,9.36e-43,56;UBERON:0005068,9.36e-43,56;UBERON:0006241,9.36e-43,56;UBERON:0007135,9.36e-43,56;UBERON:0002346,4.45e-41,86;UBERON:0002619,1.34e-39,22;UBERON:0001950,8.30e-36,20;UBERON:0004121,5.44e-34,171;UBERON:0000924,5.44e-34,171;UBERON:0006601,5.44e-34,171;UBERON:0010371,1.15e-31,104;UBERON:0010314,6.95e-30,132;UBERON:0011216,1.26e-24,223;UBERON:0002420,1.26e-15,9;UBERON:0007245,1.26e-15,9;UBERON:0010009,1.26e-15,9;UBERON:0010011,1.26e-15,9;UBERON:0000454,1.26e-15,9;UBERON:0000025,3.95e-13,192;UBERON:0007023,4.31e-13,114;UBERON:0000200,1.48e-12,6;UBERON:0000483,1.99e-12,306;UBERON:0000119,3.75e-12,309;UBERON:0009663,5.86e-12,7;UBERON:0000349,3.93e-11,5;UBERON:0001871,8.82e-11,6;UBERON:0001872,8.94e-11,5;UBERON:0000369,2.85e-10,4;UBERON:0002435,2.85e-10,4;UBERON:0000204,2.85e-10,4;UBERON:0010082,2.85e-10,4;UBERON:0002021,2.89e-10,5;UBERON:0000488,1.22e-09,4;UBERON:0007625,2.44e-09,11;UBERON:0000125,4.38e-09,9;UBERON:0002308,4.38e-09,9;UBERON:0000923,2.47e-08,560;UBERON:0010316,2.47e-08,560;UBERON:0005291,2.47e-08,560;UBERON:0006598,2.47e-08,560;UBERON:0010317,2.47e-08,560;UBERON:0002532,2.47e-08,560;UBERON:0005383,2.96e-08,3;UBERON:0005382,2.96e-08,3;UBERON:0002050,3.94e-08,564;UBERON:0004111,4.05e-08,240;UBERON:0001778,8.23e-08,3;UBERON:0001775,8.23e-08,3;UBERON:0005423,2.68e-07,581;UBERON:0000922,2.97e-07,592;UBERON:0001870,3.12e-07,3;UBERON:0001801,4.55e-07,14 | |||
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|short_description=p1@C14orf23 | |||
}} | }} |
Latest revision as of 16:31, 19 September 2015
Short description: | p1@C14orf23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C14orf23_5end |
Coexpression cluster: | C3421_Neural_caudate_medulloblastoma_Neurons_small_Astrocyte_putamen |
Association with transcript: | 0bp_to_ENST00000548213, ENST00000552957_5end |
EntrezGene: | NA |
HGNC: | 19828 |
UniProt: | F8VQW4F8VZL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.07e-15 | 25 |
glial cell (sensu Vertebrata) | 2.97e-11 | 15 |
glial cell | 2.97e-11 | 15 |
glioblast | 2.97e-11 | 15 |
glioblast (sensu Vertebrata) | 2.97e-11 | 15 |
neuron associated cell | 7.98e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 7.98e-10 | 17 |
neurectodermal cell | 1.69e-08 | 59 |
oligodendrocyte | 3.05e-08 | 7 |
macroglial cell | 3.05e-08 | 7 |
astrocyte | 3.05e-08 | 7 |
oligodendrocyte precursor cell | 3.05e-08 | 7 |
astrocyte of the cerebral cortex | 3.82e-08 | 3 |
ciliated cell | 8.23e-08 | 3 |
ciliated epithelial cell | 8.23e-08 | 3 |
multi-ciliated epithelial cell | 8.23e-08 | 3 |
non-pigmented ciliary epithelial cell | 8.23e-08 | 3 |
neuronal stem cell | 1.15e-07 | 8 |