FFCP PHASE1:Hg19::chr10:86153606..86153623,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54462 | |EntrezGene=54462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29197 | |HGNC=29197 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000494144,uc001kdi.1_5end | |association_with_transcript=0bp_to_ENST00000494144,uc001kdi.1_5end | ||
|cluster_id=chr10:86153606..86153623,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_9_at_FAM190B_5end | |description=CAGE_peak_9_at_FAM190B_5end | ||
|id=chr10:86153606..86153623,+ | |id=chr10:86153606..86153623,+ | ||
|ontology_enrichment_celltype=CL:0002601!2.62e-23!1;CL:0002363!2.07e-12!2;CL:0000008!2.07e-12!2;CL:0000623!1.30e-08!3;CL:0000825!1.30e-08!3 | |ontology_enrichment_celltype=CL:0002601!2.62e-23!1;CL:0002363!2.07e-12!2;CL:0000008!2.07e-12!2;CL:0000623!1.30e-08!3;CL:0000825!1.30e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002363;9.18e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,9.18e-26,2;CL:0000008,9.18e-26,2 | |||
|ontology_enrichment_development_v019=CL:0000008;9.18e-26;2!UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!3.28e-23!1;UBERON:0003135!7.68e-19!11;UBERON:0003566!2.07e-12!2;UBERON:0001777!2.07e-12!2;UBERON:0000473!3.54e-12!8;UBERON:0003101!9.12e-10!22;UBERON:0000079!9.12e-10!22;UBERON:0006947!1.21e-08!3;UBERON:0004054!1.21e-08!3;UBERON:0003133!8.73e-08!48;UBERON:0000964!7.70e-07!4;UBERON:0004348!7.70e-07!4;UBERON:0005427!7.70e-07!4;UBERON:0005904!8.61e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003566;9.18e-26;2!UBERON:0001777;9.18e-26;2!UBERON:0003135;4.28e-19;11!UBERON:0003891;1.29e-13;4!UBERON:0000964;1.29e-13;4!UBERON:0010409;1.29e-13;4!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003566,9.18e-26,2;UBERON:0001777,9.18e-26,2;UBERON:0003135,4.28e-19,11;UBERON:0003891,1.29e-13,4;UBERON:0000964,1.29e-13,4;UBERON:0010409,1.29e-13,4;UBERON:0004348,1.29e-13,4;UBERON:0005427,1.29e-13,4;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22 | |||
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|short_description=p9@FAM190B | |short_description=p9@FAM190B | ||
}} | }} |
Latest revision as of 17:08, 19 September 2015
Short description: | p9@FAM190B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FAM190B_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000494144, uc001kdi.1_5end |
EntrezGene: | FAM190B |
HGNC: | 29197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 9.18e-26 | 2 |
migratory cranial neural crest cell | 9.18e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
head connective tissue | 9.18e-26 | 2 |
substantia propria of cornea | 9.18e-26 | 2 |
male reproductive organ | 4.28e-19 | 11 |
stroma | 1.29e-13 | 4 |
cornea | 1.29e-13 | 4 |
eye surface | 1.29e-13 | 4 |
optic eminence | 1.29e-13 | 4 |
corneal primordium | 1.29e-13 | 4 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |