FFCP PHASE1:Hg19::chr10:88428320..88428321,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:88428320..88428321,+
|short_description=p6@LDB3
|description=CAGE_peak_6_at_LDB3_5end
|association_with_transcript=0bp_to_NM_001080116,uc001kdr.2_5end
|E...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11155 | |EntrezGene=11155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15710 | |HGNC=15710 | ||
|TSSclassifier=strong | |||
|UniProt=O75112 | |UniProt=O75112 | ||
|association_with_transcript=0bp_to_NM_001080116,uc001kdr.2_5end | |||
|cluster_id=chr10:88428320..88428321,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_6_at_LDB3_5end | |||
|id=chr10:88428320..88428321,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.66e-11;1!UBERON:0004140;4.36e-11;1!UBERON:0004874;5.05e-11;1!UBERON:0010226;5.84e-11;1!UBERON:0000358;1.10e-10;1!UBERON:0005062;2.85e-10;4!UBERON:0007284;2.85e-10;4!UBERON:0006603;2.71e-09;65!UBERON:0003104;2.38e-07;31 | |||
|ontology_enrichment_disease=DOID:114!2.70e-12!2;DOID:178!6.80e-07!1;DOID:326!6.80e-07!1;DOID:3978!6.80e-07!1;DOID:3394!6.80e-07!1;DOID:5844!6.80e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:114;2.05e-20;2!DOID:178;5.84e-11;1!DOID:326;5.84e-11;1!DOID:3978;5.84e-11;1!DOID:3394;5.84e-11;1!DOID:5844;5.84e-11;1!DOID:1287;1.10e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.05e-20,2;DOID:178,6.14e-11,1;DOID:326,6.14e-11,1;DOID:3978,6.14e-11,1;DOID:3394,6.14e-11,1;DOID:5844,6.14e-11,1;DOID:1287,1.10e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.85e-19!115;UBERON:0007100!5.28e-12!27;UBERON:0001630!5.51e-12!2;UBERON:0005090!5.51e-12!2;UBERON:0000341!8.06e-12!2;UBERON:0003103!1.07e-10!69;UBERON:0001042!1.12e-08!10;UBERON:0009145!1.12e-08!10;UBERON:0008814!1.12e-08!15;UBERON:0004151!1.60e-08!3;UBERON:0001723!1.99e-08!3;UBERON:0001033!1.99e-08!3;UBERON:0010056!1.99e-08!3;UBERON:0003978!3.55e-08!3;UBERON:0009751!3.55e-08!3;UBERON:0000946!3.55e-08!3;UBERON:0002523!3.55e-08!3;UBERON:0005983!3.55e-08!3;UBERON:0002165!3.55e-08!3;UBERON:0002062!3.55e-08!3;UBERON:0007280!3.55e-08!3;UBERON:0006562!6.78e-08!11;UBERON:0002079!4.09e-07!1;UBERON:0000989!6.08e-07!1;UBERON:0008811!6.08e-07!1;UBERON:0006258!6.08e-07!1;UBERON:0005876!6.08e-07!1;UBERON:0004874!6.08e-07!1;UBERON:0002084!6.43e-07!1;UBERON:0002082!6.43e-07!1;UBERON:0004706!6.43e-07!1;UBERON:0005418!7.60e-07!1;UBERON:0001389!7.60e-07!1;UBERON:0000026!7.60e-07!1;UBERON:0008784!7.60e-07!1;UBERON:0006058!7.60e-07!1;UBERON:0003663!7.60e-07!1;UBERON:0001383!7.60e-07!1;UBERON:0004256!7.60e-07!1;UBERON:0002529!7.60e-07!1;UBERON:0004708!7.60e-07!1;UBERON:0002101!7.60e-07!1;UBERON:0004709!7.60e-07!1;UBERON:0003661!7.60e-07!1;UBERON:0002471!7.60e-07!1;UBERON:0004357!7.60e-07!1;UBERON:0009872!7.60e-07!1;UBERON:0004347!7.60e-07!1;UBERON:0005420!7.60e-07!1;UBERON:0005732!7.60e-07!1;UBERON:0006057!7.60e-07!1;UBERON:0000978!7.60e-07!1;UBERON:0002103!7.60e-07!1;UBERON:0001665!7.60e-07!1;UBERON:0003823!7.60e-07!1;UBERON:0000154!7.60e-07!1;UBERON:0005733!7.60e-07!1;UBERON:0005730!7.60e-07!1;UBERON:0002135!8.03e-07!1;UBERON:0002426!8.49e-07!1;UBERON:0003831!8.49e-07!1;UBERON:0003898!8.49e-07!1;UBERON:0004830!8.49e-07!1;UBERON:0001774!8.49e-07!1;UBERON:0003830!8.49e-07!1;UBERON:0005175!8.49e-07!1;UBERON:0003897!8.49e-07!1;UBERON:0001103!8.49e-07!1;UBERON:0010084!8.49e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.34e-23;25!UBERON:0005090;6.86e-20;2!UBERON:0001630;6.86e-20;2!UBERON:0000341;1.41e-19;2!UBERON:0004151;5.37e-14;3!UBERON:0001723;7.66e-14;3!UBERON:0001033;7.66e-14;3!UBERON:0003978;2.19e-13;3!UBERON:0000946;2.19e-13;3!UBERON:0002079;2.66e-11;1!UBERON:0000989;5.05e-11;1!UBERON:0008811;5.05e-11;1!UBERON:0002084;5.84e-11;1!UBERON:0002082;5.84e-11;1!UBERON:0001389;7.10e-11;1!UBERON:0000026;7.10e-11;1!UBERON:0008784;7.10e-11;1!UBERON:0006058;7.10e-11;1!UBERON:0003663;7.10e-11;1!UBERON:0004256;7.10e-11;1!UBERON:0004708;7.10e-11;1!UBERON:0002101;7.10e-11;1!UBERON:0004709;7.10e-11;1!UBERON:0002529;7.10e-11;1!UBERON:0010538;7.10e-11;1!UBERON:0003661;7.10e-11;1!UBERON:0010890;7.10e-11;1!UBERON:0002471;7.10e-11;1!UBERON:0001383;7.10e-11;1!UBERON:0010758;7.10e-11;1!UBERON:0010707;7.10e-11;1!UBERON:0000978;7.10e-11;1!UBERON:0002103;7.10e-11;1!UBERON:0001665;7.10e-11;1!UBERON:0003823;7.10e-11;1!UBERON:0000154;7.10e-11;1!UBERON:0010709;7.10e-11;1!UBERON:0000948;8.99e-11;22!UBERON:0002135;9.05e-11;1!UBERON:0002426;9.05e-11;1!UBERON:0003831;9.05e-11;1!UBERON:0003898;9.05e-11;1!UBERON:0004830;9.05e-11;1!UBERON:0003830;9.05e-11;1!UBERON:0005175;9.05e-11;1!UBERON:0001774;9.05e-11;1!UBERON:0001103;9.05e-11;1!UBERON:0007029;1.46e-10;1!UBERON:0002146;1.46e-10;1!UBERON:0001301;1.46e-10;1!UBERON:0005623;1.46e-10;1!UBERON:0001134;6.74e-10;16!UBERON:0002036;6.74e-10;16!UBERON:0000974;3.92e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.28e-22,27;UBERON:0005090,7.20e-20,2;UBERON:0001630,7.20e-20,2;UBERON:0000341,1.41e-19,2;UBERON:0003103,2.74e-18,68;UBERON:0004151,5.04e-14,3;UBERON:0001723,7.42e-14,3;UBERON:0001033,7.42e-14,3;UBERON:0010056,7.42e-14,3;UBERON:0003978,2.06e-13,3;UBERON:0009751,2.06e-13,3;UBERON:0000946,2.06e-13,3;UBERON:0002523,2.06e-13,3;UBERON:0005983,2.06e-13,3;UBERON:0002165,2.06e-13,3;UBERON:0002062,2.06e-13,3;UBERON:0007280,2.06e-13,3;UBERON:0007023,4.49e-12,114;UBERON:0002079,2.53e-11,1;UBERON:0000989,5.05e-11,1;UBERON:0008811,5.05e-11,1;UBERON:0006258,5.05e-11,1;UBERON:0005876,5.05e-11,1;UBERON:0004874,5.05e-11,1;UBERON:0002084,5.57e-11,1;UBERON:0002082,5.57e-11,1;UBERON:0010226,5.57e-11,1;UBERON:0005418,7.46e-11,1;UBERON:0001389,7.46e-11,1;UBERON:0000026,7.46e-11,1;UBERON:0008784,7.46e-11,1;UBERON:0006058,7.46e-11,1;UBERON:0003663,7.46e-11,1;UBERON:0004256,7.46e-11,1;UBERON:0004708,7.46e-11,1;UBERON:0002101,7.46e-11,1;UBERON:0004709,7.46e-11,1;UBERON:0002529,7.46e-11,1;UBERON:0010538,7.46e-11,1;UBERON:0003661,7.46e-11,1;UBERON:0010890,7.46e-11,1;UBERON:0002471,7.46e-11,1;UBERON:0001383,7.46e-11,1;UBERON:0004357,7.46e-11,1;UBERON:0004347,7.46e-11,1;UBERON:0005420,7.46e-11,1;UBERON:0005732,7.46e-11,1;UBERON:0010758,7.46e-11,1;UBERON:0010707,7.46e-11,1;UBERON:0000978,7.46e-11,1;UBERON:0002103,7.46e-11,1;UBERON:0001665,7.46e-11,1;UBERON:0003823,7.46e-11,1;UBERON:0000154,7.46e-11,1;UBERON:0010709,7.46e-11,1;UBERON:0005733,7.46e-11,1;UBERON:0005730,7.46e-11,1;UBERON:0002135,8.22e-11,1;UBERON:0002426,9.05e-11,1;UBERON:0003831,9.05e-11,1;UBERON:0003898,9.05e-11,1;UBERON:0004830,9.05e-11,1;UBERON:0003830,9.05e-11,1;UBERON:0005175,9.05e-11,1;UBERON:0001774,9.05e-11,1;UBERON:0001103,9.05e-11,1;UBERON:0010084,9.05e-11,1;UBERON:0007029,1.21e-10,1;UBERON:0002146,1.46e-10,1;UBERON:0005623,1.46e-10,1;UBERON:0001301,1.77e-10,1;UBERON:0000948,7.09e-10,24;UBERON:0005498,7.09e-10,24;UBERON:0004140,7.09e-10,24;UBERON:0009881,7.09e-10,24;UBERON:0004141,7.09e-10,24;UBERON:0003084,7.09e-10,24;UBERON:0007005,7.09e-10,24;UBERON:0004139,7.09e-10,24;UBERON:0004291,7.09e-10,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.484945082442097,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6306712165393,1.83328339209347,0,6.38972801596772,10.7306512034143,8.9268582976749,8.73385142327441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4351252219739,6.62091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93937885422871,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17943069750316,11.3955715610434,10.4383298820438,1.94284397223656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19850972851471,1.90451545170992,0,0.124149428591716,0,0.190941474834495,0.606351566874658,5.22520194952707,9.58253243038787,0.134704106029175,0,1.33064142618405,0,0,0,0,2.34640942403454,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.484945082442097,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6306712165393,1.83328339209347,0,6.38972801596772,10.7306512034143,8.9268582976749,8.73385142327441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4351252219739,6.62091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93937885422871,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17943069750316,11.3955715610434,10.4383298820438,1.94284397223656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19850972851471,1.90451545170992,0,0.124149428591716,0,0.190941474834495,0.606351566874658,5.22520194952707,9.58253243038787,0.134704106029175,0,1.33064142618405,0,0,0,0,2.34640942403454,0,0,0,0.603821380773079,0 | ||
|short_description=p6@LDB3 | |||
}} | }} |
Latest revision as of 17:34, 19 September 2015
Short description: | p6@LDB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LDB3_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_NM_001080116, uc001kdr.2_5end |
EntrezGene: | LDB3 |
HGNC: | 15710 |
UniProt: | O75112 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.05e-20 | 2 |
vascular disease | 6.14e-11 | 1 |
ischemia | 6.14e-11 | 1 |
extrinsic cardiomyopathy | 6.14e-11 | 1 |
myocardial ischemia | 6.14e-11 | 1 |
myocardial infarction | 6.14e-11 | 1 |
cardiovascular system disease | 1.10e-10 | 4 |