FFCP PHASE1:Hg19::chr10:88428476..88428490,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11155 | |EntrezGene=11155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15710 | |HGNC=15710 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_uc001kdt.2,uc009xsz.2_5end | |association_with_transcript=50bp_to_uc001kdt.2,uc009xsz.2_5end | ||
|cluster_id=chr10:88428476..88428490,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_7_at_LDB3_5end | |description=CAGE_peak_7_at_LDB3_5end | ||
|id=chr10:88428476..88428490,+ | |id=chr10:88428476..88428490,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.32e-12;1!UBERON:0010226;1.32e-12;1!UBERON:0004874;1.96e-12;1!UBERON:0000358;3.64e-12;1!UBERON:0005062;7.31e-12;4!UBERON:0007284;7.31e-12;4!UBERON:0003104;1.55e-08;31!UBERON:0006603;2.66e-07;65!UBERON:0008814;6.24e-07;2!UBERON:0010056;6.24e-07;2 | |||
|ontology_enrichment_disease=DOID:114!1.63e-08!2 | |ontology_enrichment_disease=DOID:114!1.63e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:114;1.59e-23;2!DOID:178;1.96e-12;1!DOID:326;1.96e-12;1!DOID:3978;1.96e-12;1!DOID:3394;1.96e-12;1!DOID:5844;1.96e-12;1!DOID:1287;2.92e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.59e-23,2;DOID:178,1.96e-12,1;DOID:326,1.96e-12,1;DOID:3978,1.96e-12,1;DOID:3394,1.96e-12,1;DOID:5844,1.96e-12,1;DOID:1287,2.92e-12,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0005090;8.01e-24;2!UBERON:0001630;8.01e-24;2!UBERON:0000341;8.55e-23;2!UBERON:0007100;4.28e-21;25!UBERON:0001723;4.81e-16;3!UBERON:0001033;4.81e-16;3!UBERON:0004151;5.80e-16;3!UBERON:0003978;1.71e-15;3!UBERON:0000946;1.71e-15;3!UBERON:0001389;8.35e-13;1!UBERON:0000026;8.35e-13;1!UBERON:0008784;8.35e-13;1!UBERON:0006058;8.35e-13;1!UBERON:0002426;8.35e-13;1!UBERON:0003831;8.35e-13;1!UBERON:0003898;8.35e-13;1!UBERON:0004830;8.35e-13;1!UBERON:0003663;8.35e-13;1!UBERON:0004256;8.35e-13;1!UBERON:0004708;8.35e-13;1!UBERON:0002101;8.35e-13;1!UBERON:0004709;8.35e-13;1!UBERON:0003830;8.35e-13;1!UBERON:0005175;8.35e-13;1!UBERON:0002529;8.35e-13;1!UBERON:0010538;8.35e-13;1!UBERON:0003661;8.35e-13;1!UBERON:0010890;8.35e-13;1!UBERON:0002471;8.35e-13;1!UBERON:0001774;8.35e-13;1!UBERON:0001383;8.35e-13;1!UBERON:0010758;8.35e-13;1!UBERON:0010707;8.35e-13;1!UBERON:0001103;8.35e-13;1!UBERON:0000978;8.35e-13;1!UBERON:0002103;8.35e-13;1!UBERON:0001665;8.35e-13;1!UBERON:0003823;8.35e-13;1!UBERON:0000154;8.35e-13;1!UBERON:0010709;8.35e-13;1!UBERON:0002084;1.32e-12;1!UBERON:0002079;1.32e-12;1!UBERON:0002082;1.32e-12;1!UBERON:0000989;1.96e-12;1!UBERON:0002146;1.96e-12;1!UBERON:0008811;1.96e-12;1!UBERON:0005623;1.96e-12;1!UBERON:0002135;4.55e-12;1!UBERON:0001134;1.76e-11;16!UBERON:0002036;1.76e-11;16!UBERON:0000948;2.75e-08;22!UBERON:0000974;3.13e-08;6!UBERON:0002081;6.24e-07;2 | |||
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|short_description=p7@LDB3 | |short_description=p7@LDB3 | ||
}} | }} |
Latest revision as of 17:35, 19 September 2015
Short description: | p7@LDB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LDB3_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 50bp_to_uc001kdt.2, uc009xsz.2_5end |
EntrezGene: | LDB3 |
HGNC: | 15710 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.59e-23 | 2 |
vascular disease | 1.96e-12 | 1 |
ischemia | 1.96e-12 | 1 |
extrinsic cardiomyopathy | 1.96e-12 | 1 |
myocardial ischemia | 1.96e-12 | 1 |
myocardial infarction | 1.96e-12 | 1 |
cardiovascular system disease | 2.92e-12 | 4 |