FFCP PHASE1:Hg19::chr10:90750493..90750633,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=355 | |EntrezGene=355 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11920 | |HGNC=11920 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T9P3,F5H078 | |UniProt=Q5T9P3,F5H078 | ||
|association_with_transcript=0bp_to_ENST00000355279,ENST00000357339,ENST00000371875,ENST00000479522,ENST00000488877,ENST00000492756,ENST00000494410_5end | |association_with_transcript=0bp_to_ENST00000355279,ENST00000357339,ENST00000371875,ENST00000479522,ENST00000488877,ENST00000492756,ENST00000494410_5end | ||
|cluster_id=chr10:90750493..90750633,+ | |||
|description=CAGE_peak_1_at_FAS_5end | |description=CAGE_peak_1_at_FAS_5end | ||
|id=chr10:90750493..90750633,+ | |id=chr10:90750493..90750633,+ | ||
|ontology_enrichment_celltype=CL:0000048!2.05e-15!430;CL:0000134!3.62e-15!358;CL:0000723!9.43e-15!436;CL:0002320!1.47e-14!365;CL:0000034!6.36e-13!444;CL:0000219!1.48e-10!390;CL:0002057!5.89e-10!42;CL:0000738!1.04e-09!140;CL:0000057!1.70e-09!75;CL:0000860!1.71e-09!45;CL:0002371!2.23e-09!591;CL:0002031!6.16e-09!124;CL:0002087!1.61e-08!119;CL:0000003!6.94e-08!722;CL:0000766!4.64e-07!76;CL:0002620!5.18e-07!23 | |ontology_enrichment_celltype=CL:0000048!2.05e-15!430;CL:0000134!3.62e-15!358;CL:0000723!9.43e-15!436;CL:0002320!1.47e-14!365;CL:0000034!6.36e-13!444;CL:0000219!1.48e-10!390;CL:0002057!5.89e-10!42;CL:0000738!1.04e-09!140;CL:0000057!1.70e-09!75;CL:0000860!1.71e-09!45;CL:0002371!2.23e-09!591;CL:0002031!6.16e-09!124;CL:0002087!1.61e-08!119;CL:0000003!6.94e-08!722;CL:0000766!4.64e-07!76;CL:0002620!5.18e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.49e-07;23!CL:0000860;9.07e-07;33!CL:0002057;9.07e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,6.82e-16,427;CL:0000134,1.70e-15,354;CL:0000723,2.99e-15,433;CL:0002320,7.72e-15,361;CL:0000034,2.34e-13,441;CL:0000219,8.43e-11,386;CL:0000860,5.83e-10,42;CL:0002057,5.83e-10,42;CL:0000057,1.16e-09,76;CL:0000738,1.33e-09,136;CL:0002031,7.06e-09,120;CL:0000473,1.33e-08,48;CL:0000234,1.33e-08,48;CL:0002087,1.89e-08,115;CL:0000766,4.82e-07,72;CL:0002620,5.15e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;2.39e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.42e-13!375;UBERON:0002390!1.62e-08!102;UBERON:0003061!1.62e-08!102;UBERON:0002193!7.40e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.49e-14,371;UBERON:0002390,1.68e-08,98;UBERON:0003061,1.68e-08,98;UBERON:0003102,1.50e-07,99;UBERON:0002193,8.74e-07,108 | |||
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| ||
|short_description=p1@FAS | |short_description=p1@FAS | ||
}} | }} |
Latest revision as of 20:45, 19 September 2015
Short description: | p1@FAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355279, ENST00000357339, ENST00000371875, ENST00000479522, ENST00000488877, ENST00000492756, ENST00000494410_5end |
EntrezGene: | FAS |
HGNC: | 11920 |
UniProt: | Q5T9P3F5H078 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 6.82e-16 | 427 |
mesenchymal cell | 1.70e-15 | 354 |
somatic stem cell | 2.99e-15 | 433 |
connective tissue cell | 7.72e-15 | 361 |
stem cell | 2.34e-13 | 441 |
motile cell | 8.43e-11 | 386 |
classical monocyte | 5.83e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.83e-10 | 42 |
fibroblast | 1.16e-09 | 76 |
leukocyte | 1.33e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 7.06e-09 | 120 |
defensive cell | 1.33e-08 | 48 |
phagocyte | 1.33e-08 | 48 |
nongranular leukocyte | 1.89e-08 | 115 |
myeloid leukocyte | 4.82e-07 | 72 |
skin fibroblast | 5.15e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.49e-14 | 371 |
hematopoietic system | 1.68e-08 | 98 |
blood island | 1.68e-08 | 98 |
surface structure | 1.50e-07 | 99 |
hemolymphoid system | 8.74e-07 | 108 |