FFCP PHASE1:Hg19::chr18:53068893..53068902,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUG3 | |UniProt=B4DUG3 | ||
|association_with_transcript=18bp_to_ENST00000537856,uc010xdu.1_5end | |association_with_transcript=18bp_to_ENST00000537856,uc010xdu.1_5end | ||
|cluster_id=chr18:53068893..53068902,- | |||
|coexpression_cluster_id=C1237 | |coexpression_cluster_id=C1237 | ||
|description=CAGE_peak_28_at_TCF4_5end | |description=CAGE_peak_28_at_TCF4_5end | ||
|id=chr18:53068893..53068902,- | |id=chr18:53068893..53068902,- | ||
|ontology_enrichment_celltype=CL:0002139!7.80e-18!24;CL:0000222!1.18e-17!119;CL:0000071!1.22e-14!18;CL:0002546!1.22e-14!18;CL:0000115!3.59e-13!35;CL:0000055!1.18e-11!180;CL:0002078!4.73e-11!44;CL:0000393!8.99e-11!60;CL:0000211!8.99e-11!60;CL:0000680!1.13e-10!57;CL:0000056!1.13e-10!57;CL:0000355!1.13e-10!57;CL:0000187!2.15e-10!54;CL:0000183!2.56e-09!59;CL:0000213!8.50e-09!57;CL:0000215!8.50e-09!57;CL:0000192!9.37e-08!42;CL:0000514!9.37e-08!42;CL:0000359!1.26e-07!32;CL:1000413!2.85e-07!9;CL:0002543!8.11e-07!6 | |ontology_enrichment_celltype=CL:0002139!7.80e-18!24;CL:0000222!1.18e-17!119;CL:0000071!1.22e-14!18;CL:0002546!1.22e-14!18;CL:0000115!3.59e-13!35;CL:0000055!1.18e-11!180;CL:0002078!4.73e-11!44;CL:0000393!8.99e-11!60;CL:0000211!8.99e-11!60;CL:0000680!1.13e-10!57;CL:0000056!1.13e-10!57;CL:0000355!1.13e-10!57;CL:0000187!2.15e-10!54;CL:0000183!2.56e-09!59;CL:0000213!8.50e-09!57;CL:0000215!8.50e-09!57;CL:0000192!9.37e-08!42;CL:0000514!9.37e-08!42;CL:0000359!1.26e-07!32;CL:1000413!2.85e-07!9;CL:0002543!8.11e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.02e-41;24!CL:0000071;1.38e-31;18!CL:0000115;1.69e-28;36!CL:1000413;9.39e-19;9!CL:0002078;3.08e-17;45!CL:0000213;1.33e-13;58!CL:0000215;1.33e-13;58!CL:0002543;6.96e-12;6!CL:0002138;1.30e-11;6!CL:0002544;1.65e-11;6!CL:0002618;2.87e-09;3!CL:0002580;3.33e-09;3!CL:0002579;5.35e-09;3!CL:0002615;7.37e-09;3!CL:0002334;7.76e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.20e-41,24;CL:0000115,6.08e-35,36;CL:0000071,1.68e-31,18;CL:0002546,1.68e-31,18;CL:0002078,1.35e-26,45;CL:0000213,4.98e-21,58;CL:0000215,4.98e-21,58;CL:1000413,1.38e-18,9;CL:0000222,4.69e-15,121;CL:0002543,5.45e-12,6;CL:0005020,1.24e-11,6;CL:0002138,1.24e-11,6;CL:0005022,1.24e-11,6;CL:0002544,2.24e-11,6;CL:0002618,2.42e-09,3;CL:0002580,2.78e-09,3;CL:0002579,4.65e-09,3;CL:0002615,1.49e-08,3;CL:0002334,6.69e-08,12;CL:0000076,2.95e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.38e-31;18!CL:0005022;1.30e-11;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.01e-24!69;UBERON:0004872!6.62e-24!84;UBERON:0000025!7.11e-24!194;UBERON:0001981!3.35e-23!60;UBERON:0007500!3.35e-23!60;UBERON:0004537!3.35e-23!60;UBERON:0006965!3.35e-23!60;UBERON:0002049!1.67e-22!79;UBERON:0007798!1.67e-22!79;UBERON:0000483!2.81e-19!309;UBERON:0004111!5.62e-19!241;UBERON:0000119!1.20e-18!312;UBERON:0004535!2.18e-17!110;UBERON:0001009!5.35e-17!113;UBERON:0000475!8.22e-17!365;UBERON:0000477!5.99e-16!286;UBERON:0003914!8.77e-15!118;UBERON:0001986!1.22e-14!18;UBERON:0004638!1.22e-14!18;UBERON:0004852!1.22e-14!18;UBERON:0000490!1.54e-14!138;UBERON:0001637!3.38e-14!42;UBERON:0003509!3.38e-14!42;UBERON:0004572!3.38e-14!42;UBERON:0000468!7.26e-14!659;UBERON:0001017!3.09e-13!82;UBERON:0005743!4.48e-13!86;UBERON:0000073!9.43e-13!94;UBERON:0001016!9.43e-13!94;UBERON:0000487!3.08e-12!22;UBERON:0001893!5.25e-12!34;UBERON:0002020!6.63e-12!34;UBERON:0003528!6.63e-12!34;UBERON:0001049!7.49e-12!57;UBERON:0005068!7.49e-12!57;UBERON:0006241!7.49e-12!57;UBERON:0007135!7.49e-12!57;UBERON:0002791!1.77e-11!33;UBERON:0001869!1.77e-11!32;UBERON:0000955!1.89e-11!69;UBERON:0006238!1.89e-11!69;UBERON:0002616!2.18e-11!59;UBERON:0001134!2.18e-11!61;UBERON:0002036!2.18e-11!61;UBERON:0003082!2.18e-11!61;UBERON:0003075!2.90e-11!86;UBERON:0007284!2.90e-11!86;UBERON:0006914!3.30e-11!25;UBERON:0000467!3.61e-11!625;UBERON:0002385!3.99e-11!63;UBERON:0001015!3.99e-11!63;UBERON:0000383!3.99e-11!63;UBERON:0000480!4.79e-11!626;UBERON:0002346!4.80e-11!90;UBERON:0007023!5.14e-11!115;UBERON:0002780!5.99e-11!41;UBERON:0001890!5.99e-11!41;UBERON:0006240!5.99e-11!41;UBERON:0004573!7.86e-11!33;UBERON:0004571!7.86e-11!33;UBERON:0003080!1.90e-10!42;UBERON:0000956!1.08e-09!25;UBERON:0000203!1.08e-09!25;UBERON:0004290!2.19e-09!70;UBERON:0000947!7.63e-09!21;UBERON:0010191!7.63e-09!21;UBERON:0003056!4.05e-08!61;UBERON:0002619!6.32e-08!22;UBERON:0001638!1.30e-07!9;UBERON:0003920!1.30e-07!9;UBERON:0004582!1.30e-07!9;UBERON:0003915!2.85e-07!9;UBERON:0004700!2.85e-07!9;UBERON:0001917!2.85e-07!9;UBERON:0000914!3.33e-07!83;UBERON:0002329!3.33e-07!83;UBERON:0003077!3.33e-07!83;UBERON:0003059!3.33e-07!83;UBERON:0007282!3.33e-07!83;UBERON:0009618!3.33e-07!83;UBERON:0007285!3.33e-07!83;UBERON:0001950!6.77e-07!20;UBERON:0000481!7.58e-07!347;UBERON:0000486!8.13e-07!82;UBERON:0002050!8.35e-07!605;UBERON:0005423!8.35e-07!605 | |ontology_enrichment_uberon=UBERON:0000055!2.01e-24!69;UBERON:0004872!6.62e-24!84;UBERON:0000025!7.11e-24!194;UBERON:0001981!3.35e-23!60;UBERON:0007500!3.35e-23!60;UBERON:0004537!3.35e-23!60;UBERON:0006965!3.35e-23!60;UBERON:0002049!1.67e-22!79;UBERON:0007798!1.67e-22!79;UBERON:0000483!2.81e-19!309;UBERON:0004111!5.62e-19!241;UBERON:0000119!1.20e-18!312;UBERON:0004535!2.18e-17!110;UBERON:0001009!5.35e-17!113;UBERON:0000475!8.22e-17!365;UBERON:0000477!5.99e-16!286;UBERON:0003914!8.77e-15!118;UBERON:0001986!1.22e-14!18;UBERON:0004638!1.22e-14!18;UBERON:0004852!1.22e-14!18;UBERON:0000490!1.54e-14!138;UBERON:0001637!3.38e-14!42;UBERON:0003509!3.38e-14!42;UBERON:0004572!3.38e-14!42;UBERON:0000468!7.26e-14!659;UBERON:0001017!3.09e-13!82;UBERON:0005743!4.48e-13!86;UBERON:0000073!9.43e-13!94;UBERON:0001016!9.43e-13!94;UBERON:0000487!3.08e-12!22;UBERON:0001893!5.25e-12!34;UBERON:0002020!6.63e-12!34;UBERON:0003528!6.63e-12!34;UBERON:0001049!7.49e-12!57;UBERON:0005068!7.49e-12!57;UBERON:0006241!7.49e-12!57;UBERON:0007135!7.49e-12!57;UBERON:0002791!1.77e-11!33;UBERON:0001869!1.77e-11!32;UBERON:0000955!1.89e-11!69;UBERON:0006238!1.89e-11!69;UBERON:0002616!2.18e-11!59;UBERON:0001134!2.18e-11!61;UBERON:0002036!2.18e-11!61;UBERON:0003082!2.18e-11!61;UBERON:0003075!2.90e-11!86;UBERON:0007284!2.90e-11!86;UBERON:0006914!3.30e-11!25;UBERON:0000467!3.61e-11!625;UBERON:0002385!3.99e-11!63;UBERON:0001015!3.99e-11!63;UBERON:0000383!3.99e-11!63;UBERON:0000480!4.79e-11!626;UBERON:0002346!4.80e-11!90;UBERON:0007023!5.14e-11!115;UBERON:0002780!5.99e-11!41;UBERON:0001890!5.99e-11!41;UBERON:0006240!5.99e-11!41;UBERON:0004573!7.86e-11!33;UBERON:0004571!7.86e-11!33;UBERON:0003080!1.90e-10!42;UBERON:0000956!1.08e-09!25;UBERON:0000203!1.08e-09!25;UBERON:0004290!2.19e-09!70;UBERON:0000947!7.63e-09!21;UBERON:0010191!7.63e-09!21;UBERON:0003056!4.05e-08!61;UBERON:0002619!6.32e-08!22;UBERON:0001638!1.30e-07!9;UBERON:0003920!1.30e-07!9;UBERON:0004582!1.30e-07!9;UBERON:0003915!2.85e-07!9;UBERON:0004700!2.85e-07!9;UBERON:0001917!2.85e-07!9;UBERON:0000914!3.33e-07!83;UBERON:0002329!3.33e-07!83;UBERON:0003077!3.33e-07!83;UBERON:0003059!3.33e-07!83;UBERON:0007282!3.33e-07!83;UBERON:0009618!3.33e-07!83;UBERON:0007285!3.33e-07!83;UBERON:0001950!6.77e-07!20;UBERON:0000481!7.58e-07!347;UBERON:0000486!8.13e-07!82;UBERON:0002050!8.35e-07!605;UBERON:0005423!8.35e-07!605 | ||
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| ||
|short_description=p28@TCF4 | |short_description=p28@TCF4 | ||
}} | }} |
Latest revision as of 20:52, 19 September 2015
Short description: | p28@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_TCF4_5end |
Coexpression cluster: | C1237_Endothelial_Preadipocyte_Lymphatic_Renal_lung_heart_skin |
Association with transcript: | 18bp_to_ENST00000537856, uc010xdu.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B4DUG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.20e-41 | 24 |
endothelial cell | 6.08e-35 | 36 |
blood vessel endothelial cell | 1.68e-31 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.68e-31 | 18 |
meso-epithelial cell | 1.35e-26 | 45 |
lining cell | 4.98e-21 | 58 |
barrier cell | 4.98e-21 | 58 |
endothelial cell of artery | 1.38e-18 | 9 |
mesodermal cell | 4.69e-15 | 121 |
vein endothelial cell | 5.45e-12 | 6 |
lymphangioblast | 1.24e-11 | 6 |
endothelial cell of lymphatic vessel | 1.24e-11 | 6 |
vascular lymphangioblast | 1.24e-11 | 6 |
aortic endothelial cell | 2.24e-11 | 6 |
endothelial cell of umbilical vein | 2.42e-09 | 3 |
preadipocyte of the breast | 2.78e-09 | 3 |
omentum preadipocyte | 4.65e-09 | 3 |
adipocyte of omentum tissue | 1.49e-08 | 3 |
preadipocyte | 6.69e-08 | 12 |
squamous epithelial cell | 2.95e-07 | 63 |