FFCP PHASE1:Hg19::chr3:119379427..119379442,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64091 | |EntrezGene=64091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17648 | |HGNC=17648 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBU9 | |UniProt=Q9HBU9 | ||
|association_with_transcript=0bp_to_ENST00000264231,ENST00000463323,ENST00000468801,ENST00000468916,ENST00000538678_5end | |association_with_transcript=0bp_to_ENST00000264231,ENST00000463323,ENST00000468801,ENST00000468916,ENST00000538678_5end | ||
|cluster_id=chr3:119379427..119379442,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_POPDC2_5end | |description=CAGE_peak_1_at_POPDC2_5end | ||
|id=chr3:119379427..119379442,- | |id=chr3:119379427..119379442,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.30e-14;65!UBERON:0005062;1.69e-13;4!UBERON:0007284;1.69e-13;4!UBERON:0006965;1.22e-11;2!UBERON:0004872;1.27e-07;7!UBERON:0003104;1.28e-07;31!UBERON:0004140;3.13e-07;1!UBERON:0010226;3.32e-07;1!UBERON:0010227;3.95e-07;1!UBERON:0000358;4.56e-07;1!UBERON:0004874;6.06e-07;1!UBERON:0006242;6.99e-07;1!UBERON:0005754;8.51e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;9.67e-13;2!DOID:178;3.72e-07;1!DOID:326;3.72e-07;1!DOID:3978;3.72e-07;1!DOID:3394;3.72e-07;1!DOID:5844;3.72e-07;1!DOID:1287;9.01e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.68e-13,2;DOID:178,3.73e-07,1;DOID:326,3.73e-07,1;DOID:3978,3.73e-07,1;DOID:3394,3.73e-07,1;DOID:5844,3.73e-07,1;DOID:1287,9.02e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.91e-39!115;UBERON:0007100!5.69e-12!27;UBERON:0003103!1.56e-11!69;UBERON:0004151!1.90e-08!3;UBERON:0003978!2.25e-08!3;UBERON:0009751!2.25e-08!3;UBERON:0000946!2.25e-08!3;UBERON:0002523!2.25e-08!3;UBERON:0005983!2.25e-08!3;UBERON:0002165!2.25e-08!3;UBERON:0002062!2.25e-08!3;UBERON:0007280!2.25e-08!3;UBERON:0006947!7.65e-08!3;UBERON:0004054!7.65e-08!3;UBERON:0000948!9.70e-08!24;UBERON:0005498!9.70e-08!24;UBERON:0004140!9.70e-08!24;UBERON:0009881!9.70e-08!24;UBERON:0004141!9.70e-08!24;UBERON:0003084!9.70e-08!24;UBERON:0007005!9.70e-08!24;UBERON:0004139!9.70e-08!24;UBERON:0004291!9.70e-08!24;UBERON:0003135!5.46e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;5.52e-18;3!UBERON:0003978;7.96e-18;3!UBERON:0000946;7.96e-18;3!UBERON:0007100;3.10e-17;25!UBERON:0002081;1.71e-12;2!UBERON:0002133;1.97e-12;2!UBERON:0000948;6.80e-09;22!UBERON:0007023;1.80e-08;114!UBERON:0006947;2.46e-08;3!UBERON:0004054;2.46e-08;3!UBERON:0001723;4.23e-08;3!UBERON:0001033;4.23e-08;3!UBERON:0002084;3.32e-07;1!UBERON:0002082;3.32e-07;1!UBERON:0002079;3.95e-07;1!UBERON:0002146;4.18e-07;1!UBERON:0005623;4.18e-07;1!UBERON:0002135;4.56e-07;1!UBERON:0002134;4.97e-07;1!UBERON:0005208;4.97e-07;1!UBERON:0004145;4.97e-07;1!UBERON:0005946;4.97e-07;1!UBERON:0005965;4.97e-07;1!UBERON:0002078;4.97e-07;1!UBERON:0001000;6.06e-07;1!UBERON:0000989;6.06e-07;1!UBERON:0008811;6.06e-07;1!UBERON:0005352;6.06e-07;1!UBERON:0007029;8.51e-07;1!UBERON:0000998;8.51e-07;1!UBERON:0001389;8.51e-07;1!UBERON:0000026;8.51e-07;1!UBERON:0008784;8.51e-07;1!UBERON:0006058;8.51e-07;1!UBERON:0006868;8.51e-07;1!UBERON:0003663;8.51e-07;1!UBERON:0004256;8.51e-07;1!UBERON:0004708;8.51e-07;1!UBERON:0002101;8.51e-07;1!UBERON:0004709;8.51e-07;1!UBERON:0002529;8.51e-07;1!UBERON:0010538;8.51e-07;1!UBERON:0003661;8.51e-07;1!UBERON:0010890;8.51e-07;1!UBERON:0002471;8.51e-07;1!UBERON:0001383;8.51e-07;1!UBERON:0010758;8.51e-07;1!UBERON:0010707;8.51e-07;1!UBERON:0000978;8.51e-07;1!UBERON:0002103;8.51e-07;1!UBERON:0001665;8.51e-07;1!UBERON:0003823;8.51e-07;1!UBERON:0000154;8.51e-07;1!UBERON:0010709;8.51e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.36e-32,114;UBERON:0004151,5.52e-18,3;UBERON:0003978,8.19e-18,3;UBERON:0009751,8.19e-18,3;UBERON:0000946,8.19e-18,3;UBERON:0002523,8.19e-18,3;UBERON:0005983,8.19e-18,3;UBERON:0002165,8.19e-18,3;UBERON:0002062,8.19e-18,3;UBERON:0007280,8.19e-18,3;UBERON:0007100,7.77e-16,27;UBERON:0003103,2.95e-13,68;UBERON:0002081,1.71e-12,2;UBERON:0010227,1.71e-12,2;UBERON:0002133,2.02e-12,2;UBERON:0006947,2.46e-08,3;UBERON:0004054,2.46e-08,3;UBERON:0000948,4.26e-08,24;UBERON:0005498,4.26e-08,24;UBERON:0004140,4.26e-08,24;UBERON:0009881,4.26e-08,24;UBERON:0004141,4.26e-08,24;UBERON:0003084,4.26e-08,24;UBERON:0007005,4.26e-08,24;UBERON:0004139,4.26e-08,24;UBERON:0004291,4.26e-08,24;UBERON:0001723,4.72e-08,3;UBERON:0001033,4.72e-08,3;UBERON:0010056,4.72e-08,3;UBERON:0004797,6.74e-08,7;UBERON:0002084,3.32e-07,1;UBERON:0002082,3.32e-07,1;UBERON:0010226,3.32e-07,1;UBERON:0002079,3.95e-07,1;UBERON:0002146,4.18e-07,1;UBERON:0005623,4.18e-07,1;UBERON:0002135,4.69e-07,1;UBERON:0002134,4.97e-07,1;UBERON:0005208,4.97e-07,1;UBERON:0005946,4.97e-07,1;UBERON:0005965,4.97e-07,1;UBERON:0002078,4.97e-07,1;UBERON:0001000,5.89e-07,1;UBERON:0005352,5.89e-07,1;UBERON:0000989,6.24e-07,1;UBERON:0008811,6.24e-07,1;UBERON:0006258,6.24e-07,1;UBERON:0005876,6.24e-07,1;UBERON:0004874,6.24e-07,1;UBERON:0007029,7.82e-07,1;UBERON:0005418,8.27e-07,1;UBERON:0001389,8.27e-07,1;UBERON:0000026,8.27e-07,1;UBERON:0008784,8.27e-07,1;UBERON:0006058,8.27e-07,1;UBERON:0003663,8.27e-07,1;UBERON:0004256,8.27e-07,1;UBERON:0004708,8.27e-07,1;UBERON:0002101,8.27e-07,1;UBERON:0004709,8.27e-07,1;UBERON:0002529,8.27e-07,1;UBERON:0010538,8.27e-07,1;UBERON:0003661,8.27e-07,1;UBERON:0010890,8.27e-07,1;UBERON:0002471,8.27e-07,1;UBERON:0001383,8.27e-07,1;UBERON:0004357,8.27e-07,1;UBERON:0004347,8.27e-07,1;UBERON:0005420,8.27e-07,1;UBERON:0005732,8.27e-07,1;UBERON:0010758,8.27e-07,1;UBERON:0010707,8.27e-07,1;UBERON:0000978,8.27e-07,1;UBERON:0002103,8.27e-07,1;UBERON:0001665,8.27e-07,1;UBERON:0003823,8.27e-07,1;UBERON:0000154,8.27e-07,1;UBERON:0010709,8.27e-07,1;UBERON:0005733,8.27e-07,1;UBERON:0005730,8.27e-07,1;UBERON:0000998,8.75e-07,1;UBERON:0006868,8.75e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902838299183157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0.276283915531148,0,0,0,0,0,0,0,8.38468947913936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46205491157214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,2.21143911258348,1.22206028986725,0,0,0,0,0.802577647298789,0,0,0,0,5.52418163989147,2.41981432097328,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,1.93978032976839,0,0.225980740780532,0,0,0.0633107959558787,0,0,4.90941887900511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.1174761463092,52.2485766746639,20.1004446881508,74.2805881856247,190.576365372637,76.1014669876785,167.555580381895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.419636705079985,0,0,0,67.1813606790965,96.0033357029876,0.25426853765475,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,1.9846640872478,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.27857558193737,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,5.45832296228224,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,4.86657175673187,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,3.81048345171836,0,0,0,0,0,0,3.88457302312737,4.82515192224361,0,3.88568794447312,0,0,0,0,0,0,1.31196068783506,0.437119121007915,0,9.0704879048945,0,0,0,0,0,0.0939839179798536,0.515663103788617,0,0,0,0,1.46067277649303,0.917458566809082,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0.267964130156178,0,0,1.49263787330687,0.952257725854961,0.129177819672012,0.186224142887574,0,0.190941474834495,0.404234377916439,2.17716747896961,2.05339980651169,0.740872583160463,0.502055437748735,1.66330178273007,0,0,0,0,32.8497319364836,0.977931553462932,1.22068853494722,0,3.01910690386539,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902838299183157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0.276283915531148,0,0,0,0,0,0,0,8.38468947913936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46205491157214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,2.21143911258348,1.22206028986725,0,0,0,0,0.802577647298789,0,0,0,0,5.52418163989147,2.41981432097328,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,1.93978032976839,0,0.225980740780532,0,0,0.0633107959558787,0,0,4.90941887900511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.1174761463092,52.2485766746639,20.1004446881508,74.2805881856247,190.576365372637,76.1014669876785,167.555580381895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.419636705079985,0,0,0,67.1813606790965,96.0033357029876,0.25426853765475,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,1.9846640872478,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.27857558193737,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,5.45832296228224,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,4.86657175673187,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,3.81048345171836,0,0,0,0,0,0,3.88457302312737,4.82515192224361,0,3.88568794447312,0,0,0,0,0,0,1.31196068783506,0.437119121007915,0,9.0704879048945,0,0,0,0,0,0.0939839179798536,0.515663103788617,0,0,0,0,1.46067277649303,0.917458566809082,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0.267964130156178,0,0,1.49263787330687,0.952257725854961,0.129177819672012,0.186224142887574,0,0.190941474834495,0.404234377916439,2.17716747896961,2.05339980651169,0.740872583160463,0.502055437748735,1.66330178273007,0,0,0,0,32.8497319364836,0.977931553462932,1.22068853494722,0,3.01910690386539,0 | ||
|short_description=p1@POPDC2 | |short_description=p1@POPDC2 | ||
}} | }} |
Latest revision as of 21:03, 19 September 2015
Short description: | p1@POPDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POPDC2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000264231, ENST00000463323, ENST00000468801, ENST00000468916, ENST00000538678_5end |
EntrezGene: | POPDC2 |
HGNC: | 17648 |
UniProt: | Q9HBU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 9.68e-13 | 2 |
vascular disease | 3.73e-07 | 1 |
ischemia | 3.73e-07 | 1 |
extrinsic cardiomyopathy | 3.73e-07 | 1 |
myocardial ischemia | 3.73e-07 | 1 |
myocardial infarction | 3.73e-07 | 1 |
cardiovascular system disease | 9.02e-07 | 4 |